EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008008 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 74191 bases
Position: chrJH126681.1:313800-387990
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009072	SRRM_C	PF15230.6	7.6e-25	1	1
ENSLACP00000009073	SRRM_C	PF15230.6	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009141	SRRM3-201	1785	-	ENSLACP00000009072	594 (aa)	-	H3AHF1
ENSLACT00000009142	SRRM3-202	1623	-	ENSLACP00000009073	541 (aa)	-	H3AHF2

Gene Model

Click here to download ENSLACG00000008008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008008	SRRM3	99	52.037	ENSACAG00000000452	SRRM3	89	53.321	Anolis_carolinensis
ENSLACG00000008008	SRRM3	96	43.126	ENSAMXG00000016051	-	78	44.630	Astyanax_mexicanus
ENSLACG00000008008	SRRM3	51	74.286	ENSCLAG00000007682	SRRM3	55	78.125	Chinchilla_lanigera
ENSLACG00000008008	SRRM3	96	57.280	ENSCPBG00000027784	SRRM3	81	59.211	Chrysemys_picta_bellii
ENSLACG00000008008	SRRM3	96	38.095	ENSCSEG00000010978	-	68	41.264	Cynoglossus_semilaevis
ENSLACG00000008008	SRRM3	96	53.119	ENSFALG00000009603	SRRM3	81	54.344	Ficedula_albicollis
ENSLACG00000008008	SRRM3	50	64.338	ENSGALG00000001932	SRRM3	60	64.706	Gallus_gallus
ENSLACG00000008008	SRRM3	96	56.897	ENSGAGG00000021058	SRRM3	86	57.905	Gopherus_agassizii
ENSLACG00000008008	SRRM3	50	53.191	ENSHGLG00000015576	SRRM3	50	56.452	Heterocephalus_glaber_female
ENSLACG00000008008	SRRM3	96	44.898	ENSIPUG00000012467	srrm3	78	43.510	Ictalurus_punctatus
ENSLACG00000008008	SRRM3	70	53.691	ENSSTOG00000014181	SRRM3	61	78.788	Ictidomys_tridecemlineatus
ENSLACG00000008008	SRRM3	51	53.497	ENSLOCG00000002879	SRRM3	82	53.659	Lepisosteus_oculatus
ENSLACG00000008008	SRRM3	50	62.637	ENSMGAG00000003690	SRRM3	70	63.636	Meleagris_gallopavo
ENSLACG00000008008	SRRM3	52	76.271	ENSMICG00000010668	SRRM3	76	40.494	Microcebus_murinus
ENSLACG00000008008	SRRM3	96	38.899	ENSMALG00000000844	-	77	42.644	Monopterus_albus
ENSLACG00000008008	SRRM3	96	39.479	ENSOANG00000004590	-	52	45.000	Ornithorhynchus_anatinus
ENSLACG00000008008	SRRM3	50	53.957	ENSOGAG00000030805	SRRM3	80	47.339	Otolemur_garnettii
ENSLACG00000008008	SRRM3	96	44.549	ENSPKIG00000017233	SRRM3	83	45.083	Paramormyrops_kingsleyae
ENSLACG00000008008	SRRM3	100	50.413	ENSPSIG00000007850	SRRM3	88	49.638	Pelodiscus_sinensis
ENSLACG00000008008	SRRM3	54	53.872	ENSPCOG00000028464	SRRM3	80	46.961	Propithecus_coquereli
ENSLACG00000008008	SRRM3	96	42.155	ENSPNAG00000009621	SRRM3	77	43.309	Pygocentrus_nattereri
ENSLACG00000008008	SRRM3	51	82.609	ENSRROG00000034980	SRRM3	62	78.788	Rhinopithecus_roxellana
ENSLACG00000008008	SRRM3	71	48.312	ENSSFOG00015001696	SRRM3	75	49.701	Scleropages_formosus
ENSLACG00000008008	SRRM3	96	36.549	ENSSMAG00000000476	SRRM3	76	42.351	Scophthalmus_maximus
ENSLACG00000008008	SRRM3	96	40.301	ENSSLDG00000020070	SRRM3	73	43.785	Seriola_lalandi_dorsalis