EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008031 (Gene tree)
Gene ID: 102361096
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 41700 bases
Position: chrJH126981.1:315665-357364
Accession: 102361096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009098	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009167	CHD3-201	5996	XM_005997924	ENSLACP00000009098	1975 (aa)	XP_005997986	H3AHH7
ENSLACT00000024990	CHD3-202	3823	-	ENSLACP00000022688	286 (aa)	-	M3XIY2

Gene Model

Click here to download ENSLACG00000008031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008031	CHD3	99	74.374	ENSG00000170004	CHD3	99	76.749	Homo_sapiens
ENSLACG00000008031	CHD3	87	72.638	ENSAPOG00000005614	chd3	94	81.281	Acanthochromis_polyacanthus
ENSLACG00000008031	CHD3	68	74.893	ENSAMEG00000003025	-	97	74.372	Ailuropoda_melanoleuca
ENSLACG00000008031	CHD3	81	86.339	ENSACIG00000019671	chd3	98	86.339	Amphilophus_citrinellus
ENSLACG00000008031	CHD3	94	77.815	ENSAOCG00000023784	chd3	99	77.333	Amphiprion_ocellaris
ENSLACG00000008031	CHD3	92	77.815	ENSAPEG00000006341	chd3	94	71.067	Amphiprion_percula
ENSLACG00000008031	CHD3	94	72.025	ENSATEG00000000848	chd3	95	77.251	Anabas_testudineus
ENSLACG00000008031	CHD3	97	75.352	ENSACAG00000004276	CHD3	94	75.199	Anolis_carolinensis
ENSLACG00000008031	CHD3	94	75.117	ENSANAG00000034323	CHD3	97	75.710	Aotus_nancymaae
ENSLACG00000008031	CHD3	78	71.881	ENSACLG00000009222	chd3	98	70.671	Astatotilapia_calliptera
ENSLACG00000008031	CHD3	98	74.078	ENSBTAG00000014377	CHD3	96	73.828	Bos_taurus
ENSLACG00000008031	CHD3	99	74.374	ENSCJAG00000014766	CHD3	95	75.051	Callithrix_jacchus
ENSLACG00000008031	CHD3	99	73.379	ENSCAFG00000016859	CHD3	95	74.458	Canis_familiaris
ENSLACG00000008031	CHD3	94	76.752	ENSCAFG00020007422	CHD3	98	76.580	Canis_lupus_dingo
ENSLACG00000008031	CHD3	99	73.353	ENSCHIG00000016737	CHD3	96	74.455	Capra_hircus
ENSLACG00000008031	CHD3	99	74.028	ENSTSYG00000035658	CHD3	95	75.154	Carlito_syrichta
ENSLACG00000008031	CHD3	98	70.960	ENSCAPG00000014864	CHD3	95	71.537	Cavia_aperea
ENSLACG00000008031	CHD3	98	73.446	ENSCPOG00000022653	CHD3	95	74.065	Cavia_porcellus
ENSLACG00000008031	CHD3	98	75.140	ENSCCAG00000034792	CHD3	95	74.194	Cebus_capucinus
ENSLACG00000008031	CHD3	99	74.324	ENSCATG00000041717	CHD3	95	75.038	Cercocebus_atys
ENSLACG00000008031	CHD3	98	75.407	ENSCLAG00000010523	CHD3	97	75.256	Chinchilla_lanigera
ENSLACG00000008031	CHD3	99	73.346	ENSCSAG00000011122	CHD3	97	74.205	Chlorocebus_sabaeus
ENSLACG00000008031	CHD3	91	75.493	ENSCPBG00000011966	CHD3	99	77.460	Chrysemys_picta_bellii
ENSLACG00000008031	CHD3	99	74.324	ENSCANG00000037641	CHD3	98	72.416	Colobus_angolensis_palliatus
ENSLACG00000008031	CHD3	98	74.746	ENSCGRG00001011306	Chd3	97	75.013	Cricetulus_griseus_chok1gshd
ENSLACG00000008031	CHD3	92	71.560	ENSCGRG00000007878	Chd3	95	71.594	Cricetulus_griseus_crigri
ENSLACG00000008031	CHD3	92	72.923	ENSCSEG00000004489	chd3	98	73.329	Cynoglossus_semilaevis
ENSLACG00000008031	CHD3	88	83.951	ENSCVAG00000007293	chd3	94	83.951	Cyprinodon_variegatus
ENSLACG00000008031	CHD3	94	74.277	ENSDARG00000021405	chd3	98	73.424	Danio_rerio
ENSLACG00000008031	CHD3	89	71.197	ENSDNOG00000047846	CHD3	88	71.272	Dasypus_novemcinctus
ENSLACG00000008031	CHD3	98	75.381	ENSDORG00000010713	Chd3	97	75.064	Dipodomys_ordii
ENSLACG00000008031	CHD3	98	69.637	ENSETEG00000017733	CHD3	99	69.869	Echinops_telfairi
ENSLACG00000008031	CHD3	75	66.051	ENSEBUG00000008310	chd3	98	66.859	Eptatretus_burgeri
ENSLACG00000008031	CHD3	92	75.440	ENSEASG00005019360	CHD3	98	75.267	Equus_asinus_asinus
ENSLACG00000008031	CHD3	92	75.026	ENSECAG00000010051	CHD3	98	75.577	Equus_caballus
ENSLACG00000008031	CHD3	90	70.714	ENSEEUG00000015205	CHD3	82	81.356	Erinaceus_europaeus
ENSLACG00000008031	CHD3	80	91.837	ENSELUG00000019499	chd3	98	91.837	Esox_lucius
ENSLACG00000008031	CHD3	98	73.920	ENSFCAG00000009629	CHD3	92	73.734	Felis_catus
ENSLACG00000008031	CHD3	99	73.455	ENSFDAG00000008220	CHD3	97	73.039	Fukomys_damarensis
ENSLACG00000008031	CHD3	88	75.074	ENSGMOG00000013599	chd3	87	74.828	Gadus_morhua
ENSLACG00000008031	CHD3	56	77.171	ENSGAFG00000004055	chd3	98	76.481	Gambusia_affinis
ENSLACG00000008031	CHD3	97	67.850	ENSGACG00000019275	chd3	98	67.401	Gasterosteus_aculeatus
ENSLACG00000008031	CHD3	77	76.402	ENSGAGG00000013164	CHD3	97	78.003	Gopherus_agassizii
ENSLACG00000008031	CHD3	99	73.967	ENSGGOG00000013496	CHD3	98	72.401	Gorilla_gorilla
ENSLACG00000008031	CHD3	98	75.280	ENSHGLG00000012017	CHD3	98	73.551	Heterocephalus_glaber_female
ENSLACG00000008031	CHD3	85	71.494	ENSHGLG00100013902	CHD3	96	71.038	Heterocephalus_glaber_male
ENSLACG00000008031	CHD3	92	71.593	ENSHCOG00000010170	chd3	95	70.183	Hippocampus_comes
ENSLACG00000008031	CHD3	92	69.760	ENSIPUG00000003271	chd3	91	76.314	Ictalurus_punctatus
ENSLACG00000008031	CHD3	98	75.063	ENSSTOG00000025907	CHD3	97	74.619	Ictidomys_tridecemlineatus
ENSLACG00000008031	CHD3	98	75.369	ENSJJAG00000017633	Chd3	97	74.949	Jaculus_jaculus
ENSLACG00000008031	CHD3	90	80.357	ENSKMAG00000019292	chd3	96	72.009	Kryptolebias_marmoratus
ENSLACG00000008031	CHD3	95	68.793	ENSLBEG00000028485	chd3	90	81.467	Labrus_bergylta
ENSLACG00000008031	CHD3	96	73.534	ENSLOCG00000013965	chd3	87	78.637	Lepisosteus_oculatus
ENSLACG00000008031	CHD3	91	76.751	ENSLAFG00000000572	CHD3	99	70.963	Loxodonta_africana
ENSLACG00000008031	CHD3	99	74.274	ENSMFAG00000020113	CHD3	98	73.291	Macaca_fascicularis
ENSLACG00000008031	CHD3	99	73.310	ENSMMUG00000022221	CHD3	95	74.029	Macaca_mulatta
ENSLACG00000008031	CHD3	99	74.324	ENSMNEG00000001728	CHD3	98	74.586	Macaca_nemestrina
ENSLACG00000008031	CHD3	99	74.324	ENSMLEG00000032249	CHD3	95	75.038	Mandrillus_leucophaeus
ENSLACG00000008031	CHD3	87	73.810	ENSMAMG00000000564	chd3	99	73.547	Mastacembelus_armatus
ENSLACG00000008031	CHD3	98	75.064	ENSMAUG00000013873	Chd3	98	74.284	Mesocricetus_auratus
ENSLACG00000008031	CHD3	98	73.894	ENSMICG00000008741	CHD3	93	74.368	Microcebus_murinus
ENSLACG00000008031	CHD3	98	75.115	ENSMOCG00000004848	Chd3	97	74.859	Microtus_ochrogaster
ENSLACG00000008031	CHD3	96	70.665	ENSMMOG00000012699	chd3	93	80.357	Mola_mola
ENSLACG00000008031	CHD3	92	75.828	ENSMODG00000007509	CHD3	98	76.390	Monodelphis_domestica
ENSLACG00000008031	CHD3	98	74.758	MGP_CAROLIEiJ_G0016564	Chd3	99	75.000	Mus_caroli
ENSLACG00000008031	CHD3	98	74.987	ENSMUSG00000018474	Chd3	99	74.783	Mus_musculus
ENSLACG00000008031	CHD3	98	75.433	MGP_PahariEiJ_G0017695	Chd3	99	74.974	Mus_pahari
ENSLACG00000008031	CHD3	98	75.089	MGP_SPRETEiJ_G0017400	Chd3	99	74.885	Mus_spretus
ENSLACG00000008031	CHD3	86	75.552	ENSMPUG00000008861	CHD3	98	75.704	Mustela_putorius_furo
ENSLACG00000008031	CHD3	99	73.092	ENSMLUG00000014643	-	95	73.541	Myotis_lucifugus
ENSLACG00000008031	CHD3	99	73.448	ENSNGAG00000000773	Chd3	95	74.936	Nannospalax_galili
ENSLACG00000008031	CHD3	88	71.185	ENSNBRG00000000636	chd3	89	73.694	Neolamprologus_brichardi
ENSLACG00000008031	CHD3	99	72.809	ENSNLEG00000009770	CHD3	99	71.787	Nomascus_leucogenys
ENSLACG00000008031	CHD3	84	77.027	ENSMEUG00000005852	CHD3	84	77.027	Notamacropus_eugenii
ENSLACG00000008031	CHD3	94	75.078	ENSOPRG00000011069	CHD3	98	74.804	Ochotona_princeps
ENSLACG00000008031	CHD3	99	73.531	ENSODEG00000017785	CHD3	96	74.317	Octodon_degus
ENSLACG00000008031	CHD3	96	71.320	ENSONIG00000009292	chd3	78	74.243	Oreochromis_niloticus
ENSLACG00000008031	CHD3	98	70.446	ENSOCUG00000029299	CHD3	97	70.550	Oryctolagus_cuniculus
ENSLACG00000008031	CHD3	83	68.848	ENSORLG00000007107	chd3	84	73.595	Oryzias_latipes
ENSLACG00000008031	CHD3	57	73.475	ENSORLG00020008387	chd3	95	73.563	Oryzias_latipes_hni
ENSLACG00000008031	CHD3	87	73.349	ENSOMEG00000013691	chd3	99	73.590	Oryzias_melastigma
ENSLACG00000008031	CHD3	98	73.794	ENSOGAG00000003216	CHD3	97	74.358	Otolemur_garnettii
ENSLACG00000008031	CHD3	99	72.343	ENSOARG00000017855	CHD3	95	73.499	Ovis_aries
ENSLACG00000008031	CHD3	99	72.570	ENSPPAG00000032886	CHD3	98	72.458	Pan_paniscus
ENSLACG00000008031	CHD3	98	75.636	ENSPPRG00000000626	CHD3	95	75.462	Panthera_pardus
ENSLACG00000008031	CHD3	99	74.374	ENSPTRG00000008714	CHD3	98	72.954	Pan_troglodytes
ENSLACG00000008031	CHD3	99	72.847	ENSPANG00000023938	CHD3	98	73.344	Papio_anubis
ENSLACG00000008031	CHD3	97	71.813	ENSPKIG00000006305	chd3	98	73.364	Paramormyrops_kingsleyae
ENSLACG00000008031	CHD3	57	82.230	ENSPSIG00000010177	CHD3	98	82.177	Pelodiscus_sinensis
ENSLACG00000008031	CHD3	98	73.658	ENSPEMG00000014262	Chd3	96	74.797	Peromyscus_maniculatus_bairdii
ENSLACG00000008031	CHD3	98	74.352	ENSPCIG00000005442	CHD3	94	86.441	Phascolarctos_cinereus
ENSLACG00000008031	CHD3	94	71.827	ENSPFOG00000012464	chd3	85	75.113	Poecilia_formosa
ENSLACG00000008031	CHD3	94	69.263	ENSPLAG00000002887	chd3	94	82.353	Poecilia_latipinna
ENSLACG00000008031	CHD3	50	80.435	ENSPMEG00000016725	chd3	93	73.444	Poecilia_mexicana
ENSLACG00000008031	CHD3	97	72.004	ENSPREG00000011044	chd3	97	72.323	Poecilia_reticulata
ENSLACG00000008031	CHD3	97	71.795	ENSPPYG00000007940	CHD3	96	71.814	Pongo_abelii
ENSLACG00000008031	CHD3	94	74.965	ENSPCAG00000004350	CHD3	93	75.304	Procavia_capensis
ENSLACG00000008031	CHD3	99	74.623	ENSPCOG00000020952	CHD3	95	73.981	Propithecus_coquereli
ENSLACG00000008031	CHD3	79	79.492	ENSPVAG00000016344	CHD3	84	76.414	Pteropus_vampyrus
ENSLACG00000008031	CHD3	97	74.062	ENSPNAG00000020393	chd3	98	77.630	Pygocentrus_nattereri
ENSLACG00000008031	CHD3	92	75.186	ENSRNOG00000009722	Chd3	98	74.960	Rattus_norvegicus
ENSLACG00000008031	CHD3	99	72.121	ENSRBIG00000033562	CHD3	98	72.536	Rhinopithecus_bieti
ENSLACG00000008031	CHD3	99	74.324	ENSRROG00000029554	CHD3	98	73.593	Rhinopithecus_roxellana
ENSLACG00000008031	CHD3	99	74.748	ENSSBOG00000020719	CHD3	98	75.000	Saimiri_boliviensis_boliviensis
ENSLACG00000008031	CHD3	98	74.962	ENSSHAG00000014412	CHD3	97	75.051	Sarcophilus_harrisii
ENSLACG00000008031	CHD3	92	70.284	ENSSFOG00015023123	chd3	98	69.981	Scleropages_formosus
ENSLACG00000008031	CHD3	92	72.032	ENSSMAG00000006451	chd3	99	72.277	Scophthalmus_maximus
ENSLACG00000008031	CHD3	52	74.470	ENSSDUG00000005792	chd3	95	73.112	Seriola_dumerili
ENSLACG00000008031	CHD3	96	71.087	ENSSPAG00000013694	chd3	99	75.581	Stegastes_partitus
ENSLACG00000008031	CHD3	98	73.941	ENSSSCG00000021363	CHD3	99	75.595	Sus_scrofa
ENSLACG00000008031	CHD3	79	72.693	ENSTRUG00000014990	chd3	87	74.272	Takifugu_rubripes
ENSLACG00000008031	CHD3	96	71.813	ENSTNIG00000012998	chd3	97	71.151	Tetraodon_nigroviridis
ENSLACG00000008031	CHD3	61	87.273	ENSTBEG00000011454	-	70	87.273	Tupaia_belangeri
ENSLACG00000008031	CHD3	96	74.908	ENSTTRG00000010295	CHD3	94	75.607	Tursiops_truncatus
ENSLACG00000008031	CHD3	94	73.709	ENSUAMG00000005475	CHD3	98	74.306	Ursus_americanus
ENSLACG00000008031	CHD3	52	91.022	ENSVPAG00000010794	-	55	91.022	Vicugna_pacos
ENSLACG00000008031	CHD3	97	75.399	ENSVVUG00000028011	CHD3	96	75.574	Vulpes_vulpes
ENSLACG00000008031	CHD3	97	66.600	ENSXETG00000012991	chd3	90	67.516	Xenopus_tropicalis
ENSLACG00000008031	CHD3	52	81.465	ENSXCOG00000000809	chd3	94	81.511	Xiphophorus_couchianus
ENSLACG00000008031	CHD3	81	82.632	ENSXMAG00000016035	chd3	99	76.885	Xiphophorus_maculatus