EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 5459 bases
Position: chrJH128424.1:316388-321846
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009108	zf-CCHC	PF00098.23	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009177	-	969	-	ENSLACP00000009108	323 (aa)	-	H3AHI7

Gene Model

Click here to download ENSLACG00000008039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008039	-	100	62.611	ENSLACG00000002768	-	86	62.611
ENSLACG00000008039	-	87	53.398	ENSLACG00000012908	-	100	53.398
ENSLACG00000008039	-	90	57.605	ENSLACG00000005078	-	100	57.605
ENSLACG00000008039	-	96	52.888	ENSLACG00000004531	-	98	52.888
ENSLACG00000008039	-	99	60.185	ENSLACG00000006128	-	99	60.185
ENSLACG00000008039	-	99	73.620	ENSLACG00000002363	-	81	73.620
ENSLACG00000008039	-	87	56.757	ENSLACG00000010543	-	100	56.757
ENSLACG00000008039	-	98	63.830	ENSLACG00000017942	-	99	63.830
ENSLACG00000008039	-	100	53.216	ENSLACG00000004689	-	94	53.216
ENSLACG00000008039	-	96	76.997	ENSLACG00000004000	-	99	76.997
ENSLACG00000008039	-	99	45.482	ENSLACG00000002836	-	99	45.482
ENSLACG00000008039	-	71	62.656	ENSLACG00000012373	-	79	63.071
ENSLACG00000008039	-	100	52.557	ENSLACG00000002057	-	99	52.273
ENSLACG00000008039	-	100	61.424	ENSLACG00000000325	-	99	61.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008039	-	71	44.361	ENSCPBG00000028243	-	84	44.361	Chrysemys_picta_bellii
ENSLACG00000008039	-	56	44.554	ENSGAGG00000002892	-	92	44.554	Gopherus_agassizii
ENSLACG00000008039	-	100	45.000	ENSXETG00000026538	-	82	45.000	Xenopus_tropicalis
ENSLACG00000008039	-	100	45.882	ENSXETG00000019379	-	83	45.882	Xenopus_tropicalis
ENSLACG00000008039	-	100	45.858	ENSXETG00000005082	ankrd31	83	45.858	Xenopus_tropicalis
ENSLACG00000008039	-	100	46.154	ENSXETG00000006819	-	76	46.154	Xenopus_tropicalis