EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008074 (Gene tree)
Gene ID: 102361600
Gene Symbol: TGS1
Alias: NCOA6IP|PIMT
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 81109 bases
Position: chrJH126724.1:318721-399829
Accession: 102361600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009146	Methyltransf_15	PF09445.10	6.9e-41	1	1
ENSLACP00000009147	Methyltransf_15	PF09445.10	4.6e-30	1	1
ENSLACP00000009147	UPF0020	PF01170.18	2.8e-06	1	1
ENSLACP00000009146	UPF0020	PF01170.18	2.9e-06	1	1
ENSLACP00000009147	Met_10	PF02475.16	4.2e-07	1	1
ENSLACP00000009146	Met_10	PF02475.16	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009215	TGS1-201	2601	XM_005993428	ENSLACP00000009146	867 (aa)	XP_005993490	H3AHM5
ENSLACT00000009216	TGS1-202	3168	XM_005993430	ENSLACP00000009147	838 (aa)	-	H3AHM6

Gene Model

Click here to download ENSLACG00000008074's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008074	TGS1	100	47.914	ENSG00000137574	TGS1	99	47.463	Homo_sapiens
ENSLACG00000008074	TGS1	70	34.704	ENSAPOG00000004321	-	99	35.902	Acanthochromis_polyacanthus
ENSLACG00000008074	TGS1	100	49.052	ENSAMEG00000001781	TGS1	99	48.434	Ailuropoda_melanoleuca
ENSLACG00000008074	TGS1	99	36.506	ENSAOCG00000022799	lyn	99	35.365	Amphiprion_ocellaris
ENSLACG00000008074	TGS1	79	39.281	ENSAPEG00000019723	TGS1	98	38.828	Amphiprion_percula
ENSLACG00000008074	TGS1	97	36.091	ENSATEG00000005927	lyn	92	36.364	Anabas_testudineus
ENSLACG00000008074	TGS1	75	48.435	ENSAPLG00000006073	-	94	48.137	Anas_platyrhynchos
ENSLACG00000008074	TGS1	99	45.333	ENSACAG00000017988	TGS1	92	44.846	Anolis_carolinensis
ENSLACG00000008074	TGS1	100	44.457	ENSANAG00000035525	TGS1	99	43.922	Aotus_nancymaae
ENSLACG00000008074	TGS1	99	36.425	ENSACLG00000000261	lyn	99	37.201	Astatotilapia_calliptera
ENSLACG00000008074	TGS1	99	39.185	ENSAMXG00000014086	lyn	98	39.227	Astyanax_mexicanus
ENSLACG00000008074	TGS1	100	46.325	ENSBTAG00000005898	TGS1	99	46.548	Bos_taurus
ENSLACG00000008074	TGS1	100	47.539	ENSCJAG00000016657	TGS1	98	47.138	Callithrix_jacchus
ENSLACG00000008074	TGS1	100	49.553	ENSCAFG00000007011	TGS1	99	49.050	Canis_familiaris
ENSLACG00000008074	TGS1	100	49.272	ENSCAFG00020015485	TGS1	99	48.770	Canis_lupus_dingo
ENSLACG00000008074	TGS1	100	46.300	ENSCHIG00000013976	TGS1	99	46.637	Capra_hircus
ENSLACG00000008074	TGS1	100	47.870	ENSTSYG00000000171	TGS1	99	47.640	Carlito_syrichta
ENSLACG00000008074	TGS1	96	44.154	ENSCAPG00000013732	TGS1	99	43.736	Cavia_aperea
ENSLACG00000008074	TGS1	100	46.034	ENSCPOG00000009713	TGS1	99	46.094	Cavia_porcellus
ENSLACG00000008074	TGS1	100	47.256	ENSCCAG00000030476	TGS1	98	47.309	Cebus_capucinus
ENSLACG00000008074	TGS1	100	48.761	ENSCATG00000035375	TGS1	99	48.140	Cercocebus_atys
ENSLACG00000008074	TGS1	100	47.928	ENSCLAG00000009468	TGS1	99	47.704	Chinchilla_lanigera
ENSLACG00000008074	TGS1	97	45.422	ENSCSAG00000014611	TGS1	99	44.976	Chlorocebus_sabaeus
ENSLACG00000008074	TGS1	100	45.022	ENSCHOG00000001462	TGS1	99	44.629	Choloepus_hoffmanni
ENSLACG00000008074	TGS1	99	48.565	ENSCPBG00000004958	TGS1	99	48.124	Chrysemys_picta_bellii
ENSLACG00000008074	TGS1	100	47.704	ENSCANG00000041389	TGS1	99	47.480	Colobus_angolensis_palliatus
ENSLACG00000008074	TGS1	100	46.171	ENSCGRG00001019470	Tgs1	99	45.940	Cricetulus_griseus_chok1gshd
ENSLACG00000008074	TGS1	100	45.536	ENSCGRG00000008981	Tgs1	99	45.364	Cricetulus_griseus_crigri
ENSLACG00000008074	TGS1	98	37.860	ENSDARG00000107511	lyn	99	68.333	Danio_rerio
ENSLACG00000008074	TGS1	100	48.712	ENSDNOG00000008353	TGS1	99	48.600	Dasypus_novemcinctus
ENSLACG00000008074	TGS1	100	47.072	ENSDORG00000012484	Tgs1	99	46.682	Dipodomys_ordii
ENSLACG00000008074	TGS1	83	47.573	ENSETEG00000005126	TGS1	84	46.602	Echinops_telfairi
ENSLACG00000008074	TGS1	97	46.318	ENSEASG00005016371	TGS1	95	45.283	Equus_asinus_asinus
ENSLACG00000008074	TGS1	100	49.220	ENSECAG00000019399	TGS1	99	48.441	Equus_caballus
ENSLACG00000008074	TGS1	69	94.545	ENSEEUG00000001735	TGS1	70	94.545	Erinaceus_europaeus
ENSLACG00000008074	TGS1	99	39.038	ENSELUG00000012537	lyn	99	39.374	Esox_lucius
ENSLACG00000008074	TGS1	100	49.444	ENSFCAG00000011478	TGS1	99	49.000	Felis_catus
ENSLACG00000008074	TGS1	90	46.529	ENSFALG00000010249	TGS1	99	47.016	Ficedula_albicollis
ENSLACG00000008074	TGS1	100	46.607	ENSFDAG00000011405	TGS1	99	46.009	Fukomys_damarensis
ENSLACG00000008074	TGS1	99	45.312	ENSGALG00000015340	TGS1	99	45.323	Gallus_gallus
ENSLACG00000008074	TGS1	99	47.608	ENSGAGG00000019590	TGS1	99	47.783	Gopherus_agassizii
ENSLACG00000008074	TGS1	100	48.090	ENSGGOG00000008624	TGS1	99	47.816	Gorilla_gorilla
ENSLACG00000008074	TGS1	73	38.301	ENSHBUG00000003518	lyn	99	38.301	Haplochromis_burtoni
ENSLACG00000008074	TGS1	71	87.500	ENSHGLG00000000284	TGS1	87	81.818	Heterocephalus_glaber_female
ENSLACG00000008074	TGS1	100	38.488	ENSHCOG00000014161	lyn	99	38.435	Hippocampus_comes
ENSLACG00000008074	TGS1	79	40.678	ENSIPUG00000002294	tgs1	97	37.387	Ictalurus_punctatus
ENSLACG00000008074	TGS1	100	46.763	ENSSTOG00000009597	TGS1	99	46.548	Ictidomys_tridecemlineatus
ENSLACG00000008074	TGS1	100	45.782	ENSJJAG00000016239	Tgs1	99	45.843	Jaculus_jaculus
ENSLACG00000008074	TGS1	99	35.333	ENSKMAG00000019371	-	98	35.141	Kryptolebias_marmoratus
ENSLACG00000008074	TGS1	99	38.593	ENSLBEG00000027341	-	98	38.939	Labrus_bergylta
ENSLACG00000008074	TGS1	100	42.729	ENSLOCG00000005492	lyn	95	48.169	Lepisosteus_oculatus
ENSLACG00000008074	TGS1	100	46.350	ENSLAFG00000015386	TGS1	99	46.274	Loxodonta_africana
ENSLACG00000008074	TGS1	100	48.423	ENSMFAG00000029838	TGS1	99	47.865	Macaca_fascicularis
ENSLACG00000008074	TGS1	100	48.090	ENSMMUG00000005478	TGS1	99	47.528	Macaca_mulatta
ENSLACG00000008074	TGS1	100	48.311	ENSMNEG00000023719	TGS1	99	47.753	Macaca_nemestrina
ENSLACG00000008074	TGS1	100	48.539	ENSMLEG00000034807	TGS1	99	48.036	Mandrillus_leucophaeus
ENSLACG00000008074	TGS1	99	38.757	ENSMAMG00000009542	TGS1	99	38.644	Mastacembelus_armatus
ENSLACG00000008074	TGS1	99	36.538	ENSMZEG00005015681	lyn	99	37.315	Maylandia_zebra
ENSLACG00000008074	TGS1	78	49.642	ENSMGAG00000010966	TGS1	88	49.496	Meleagris_gallopavo
ENSLACG00000008074	TGS1	100	45.955	ENSMAUG00000009875	Tgs1	99	45.505	Mesocricetus_auratus
ENSLACG00000008074	TGS1	100	49.441	ENSMICG00000011199	TGS1	99	49.048	Microcebus_murinus
ENSLACG00000008074	TGS1	100	45.686	ENSMOCG00000019560	Tgs1	99	45.505	Microtus_ochrogaster
ENSLACG00000008074	TGS1	58	46.771	ENSMMOG00000021495	lyn	82	46.771	Mola_mola
ENSLACG00000008074	TGS1	84	51.973	ENSMODG00000009174	TGS1	91	51.565	Monodelphis_domestica
ENSLACG00000008074	TGS1	90	37.701	ENSMALG00000021440	lyn	99	37.424	Monopterus_albus
ENSLACG00000008074	TGS1	100	44.843	MGP_CAROLIEiJ_G0025779	-	98	45.067	Mus_caroli
ENSLACG00000008074	TGS1	100	40.265	MGP_CAROLIEiJ_G0025780	-	98	40.487	Mus_caroli
ENSLACG00000008074	TGS1	100	43.902	ENSMUSG00000028233	Tgs1	98	44.137	Mus_musculus
ENSLACG00000008074	TGS1	100	44.482	MGP_PahariEiJ_G0023901	-	98	44.482	Mus_pahari
ENSLACG00000008074	TGS1	100	39.563	MGP_PahariEiJ_G0023902	-	98	39.563	Mus_pahari
ENSLACG00000008074	TGS1	100	44.013	MGP_SPRETEiJ_G0026727	-	98	44.248	Mus_spretus
ENSLACG00000008074	TGS1	96	45.346	ENSMPUG00000010475	TGS1	99	45.738	Mustela_putorius_furo
ENSLACG00000008074	TGS1	100	47.725	ENSMLUG00000014857	TGS1	99	47.007	Myotis_lucifugus
ENSLACG00000008074	TGS1	100	46.077	ENSNGAG00000019532	Tgs1	99	45.575	Nannospalax_galili
ENSLACG00000008074	TGS1	100	47.933	ENSNLEG00000001101	TGS1	99	47.884	Nomascus_leucogenys
ENSLACG00000008074	TGS1	93	46.424	ENSMEUG00000001697	TGS1	97	46.732	Notamacropus_eugenii
ENSLACG00000008074	TGS1	92	45.000	ENSODEG00000002948	TGS1	100	44.485	Octodon_degus
ENSLACG00000008074	TGS1	60	45.714	ENSONIG00000006339	lyn	90	37.980	Oreochromis_niloticus
ENSLACG00000008074	TGS1	90	49.628	ENSOANG00000021853	TGS1	98	49.380	Ornithorhynchus_anatinus
ENSLACG00000008074	TGS1	100	47.416	ENSOCUG00000017522	TGS1	99	46.644	Oryctolagus_cuniculus
ENSLACG00000008074	TGS1	87	42.773	ENSORLG00000004299	lyn	95	35.706	Oryzias_latipes
ENSLACG00000008074	TGS1	87	41.797	ENSORLG00020004200	lyn	95	34.594	Oryzias_latipes_hni
ENSLACG00000008074	TGS1	90	36.181	ENSORLG00015007251	lyn	97	36.600	Oryzias_latipes_hsok
ENSLACG00000008074	TGS1	99	35.771	ENSOMEG00000020174	lyn	98	35.959	Oryzias_melastigma
ENSLACG00000008074	TGS1	100	48.000	ENSOGAG00000012572	TGS1	99	48.000	Otolemur_garnettii
ENSLACG00000008074	TGS1	100	46.480	ENSOARG00000014613	TGS1	99	46.816	Ovis_aries
ENSLACG00000008074	TGS1	100	47.978	ENSPPAG00000039058	TGS1	99	47.753	Pan_paniscus
ENSLACG00000008074	TGS1	100	48.498	ENSPPRG00000000677	TGS1	99	48.165	Panthera_pardus
ENSLACG00000008074	TGS1	100	49.055	ENSPTIG00000005122	TGS1	99	48.721	Panthera_tigris_altaica
ENSLACG00000008074	TGS1	100	47.978	ENSPTRG00000020262	TGS1	99	47.753	Pan_troglodytes
ENSLACG00000008074	TGS1	100	48.416	ENSPANG00000018910	TGS1	99	47.851	Papio_anubis
ENSLACG00000008074	TGS1	93	41.135	ENSPKIG00000005454	lyn	69	41.926	Paramormyrops_kingsleyae
ENSLACG00000008074	TGS1	99	47.651	ENSPSIG00000014983	TGS1	99	48.083	Pelodiscus_sinensis
ENSLACG00000008074	TGS1	56	66.667	ENSPMGG00000012711	lyn	97	55.963	Periophthalmus_magnuspinnatus
ENSLACG00000008074	TGS1	100	46.076	ENSPEMG00000007957	Tgs1	99	46.240	Peromyscus_maniculatus_bairdii
ENSLACG00000008074	TGS1	100	49.231	ENSPCIG00000016232	TGS1	98	48.732	Phascolarctos_cinereus
ENSLACG00000008074	TGS1	77	39.568	ENSPFOG00000001545	-	98	39.568	Poecilia_formosa
ENSLACG00000008074	TGS1	96	33.095	ENSPREG00000012261	-	99	32.147	Poecilia_reticulata
ENSLACG00000008074	TGS1	100	47.914	ENSPPYG00000018597	TGS1	99	47.039	Pongo_abelii
ENSLACG00000008074	TGS1	100	46.016	ENSPCAG00000000143	TGS1	99	44.839	Procavia_capensis
ENSLACG00000008074	TGS1	100	48.156	ENSPCOG00000013537	TGS1	99	47.768	Propithecus_coquereli
ENSLACG00000008074	TGS1	89	76.543	ENSPVAG00000016399	TGS1	86	81.308	Pteropus_vampyrus
ENSLACG00000008074	TGS1	77	37.368	ENSPNYG00000023004	lyn	87	37.953	Pundamilia_nyererei
ENSLACG00000008074	TGS1	99	40.649	ENSPNAG00000022249	lyn	99	40.583	Pygocentrus_nattereri
ENSLACG00000008074	TGS1	100	45.183	ENSRNOG00000008156	Tgs1	99	45.111	Rattus_norvegicus
ENSLACG00000008074	TGS1	100	47.191	ENSRBIG00000041893	TGS1	99	46.854	Rhinopithecus_bieti
ENSLACG00000008074	TGS1	100	48.315	ENSRROG00000035127	TGS1	99	48.090	Rhinopithecus_roxellana
ENSLACG00000008074	TGS1	97	45.888	ENSSBOG00000024469	TGS1	99	45.571	Saimiri_boliviensis_boliviensis
ENSLACG00000008074	TGS1	100	48.539	ENSSHAG00000012878	TGS1	100	45.923	Sarcophilus_harrisii
ENSLACG00000008074	TGS1	98	38.504	ENSSFOG00015001308	tgs1	96	39.286	Scleropages_formosus
ENSLACG00000008074	TGS1	97	39.080	ENSSMAG00000019469	lyn	99	37.889	Scophthalmus_maximus
ENSLACG00000008074	TGS1	99	35.363	ENSSPAG00000002170	lyn	96	35.906	Stegastes_partitus
ENSLACG00000008074	TGS1	94	44.175	ENSSSCG00000006251	TGS1	98	43.985	Sus_scrofa
ENSLACG00000008074	TGS1	97	46.154	ENSTGUG00000011050	TGS1	100	46.705	Taeniopygia_guttata
ENSLACG00000008074	TGS1	72	60.294	ENSTNIG00000018133	lyn	99	36.562	Tetraodon_nigroviridis
ENSLACG00000008074	TGS1	85	96.364	ENSTBEG00000010953	TGS1	84	96.364	Tupaia_belangeri
ENSLACG00000008074	TGS1	85	52.941	ENSTTRG00000017239	TGS1	82	52.941	Tursiops_truncatus
ENSLACG00000008074	TGS1	100	48.721	ENSUAMG00000027718	TGS1	99	47.545	Ursus_americanus
ENSLACG00000008074	TGS1	96	46.036	ENSUMAG00000009761	TGS1	99	45.724	Ursus_maritimus
ENSLACG00000008074	TGS1	82	45.619	ENSVPAG00000001166	TGS1	82	45.793	Vicugna_pacos
ENSLACG00000008074	TGS1	96	45.972	ENSVVUG00000017821	TGS1	99	45.823	Vulpes_vulpes
ENSLACG00000008074	TGS1	100	44.009	ENSXETG00000005648	tgs1	99	43.337	Xenopus_tropicalis