EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008103 (Gene tree)
Gene ID: 102359169
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 17897 bases
Position: chrJH127746.1:321082-338978
Accession: 102359169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009180	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009250	-	930	XM_006005350	ENSLACP00000009180	178 (aa)	-	H3AHQ9

Gene Model

Click here to download ENSLACG00000008103's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008103	-	87	30.818	ENSLACG00000014985	RAP2B	89	31.579
ENSLACG00000008103	-	97	47.399	ENSLACG00000010461	RAB12	69	47.674
ENSLACG00000008103	-	93	37.714	ENSLACG00000015770	RAB7A	82	37.714
ENSLACG00000008103	-	98	55.556	ENSLACG00000012869	RAB1A	85	55.556
ENSLACG00000008103	-	96	47.486	ENSLACG00000018444	RAB35	85	47.486
ENSLACG00000008103	-	96	39.429	ENSLACG00000011256	rab18b	83	39.429
ENSLACG00000008103	-	98	40.884	ENSLACG00000002332	-	83	40.884
ENSLACG00000008103	-	98	34.463	ENSLACG00000012674	si:dkey-34d22.5	84	34.463
ENSLACG00000008103	-	85	32.692	ENSLACG00000013122	RRAS2	81	33.333
ENSLACG00000008103	-	56	30.693	ENSLACG00000017926	ARF1	53	30.693
ENSLACG00000008103	-	90	30.120	ENSLACG00000001282	-	77	30.120
ENSLACG00000008103	-	92	40.854	ENSLACG00000014446	RAB2B	99	40.854
ENSLACG00000008103	-	54	34.021	ENSLACG00000001595	ARL3	51	34.021
ENSLACG00000008103	-	92	41.104	ENSLACG00000009310	rab18a	79	41.104
ENSLACG00000008103	-	93	47.879	ENSLACG00000022111	-	83	47.879
ENSLACG00000008103	-	93	33.908	ENSLACG00000018427	HRAS	90	33.146
ENSLACG00000008103	-	72	33.333	ENSLACG00000010885	-	84	33.333
ENSLACG00000008103	-	60	30.973	ENSLACG00000010889	-	58	30.973
ENSLACG00000008103	-	92	40.491	ENSLACG00000004663	RAB5A	75	40.491
ENSLACG00000008103	-	91	43.103	ENSLACG00000013571	RAB33B	73	43.103
ENSLACG00000008103	-	98	54.444	ENSLACG00000012717	RAB1B	86	55.307
ENSLACG00000008103	-	90	33.133	ENSLACG00000017138	RRAS	93	33.133
ENSLACG00000008103	-	92	38.095	ENSLACG00000017891	RAB9B	78	38.095
ENSLACG00000008103	-	94	34.682	ENSLACG00000016958	-	81	34.682
ENSLACG00000008103	-	86	33.962	ENSLACG00000012088	rheb	83	33.962
ENSLACG00000008103	-	56	30.693	ENSLACG00000019010	-	53	30.693
ENSLACG00000008103	-	89	39.877	ENSLACG00000005168	RAB6A	76	39.877
ENSLACG00000008103	-	98	44.134	ENSLACG00000016857	-	80	44.134
ENSLACG00000008103	-	96	38.857	ENSLACG00000011181	RAB14	79	38.857
ENSLACG00000008103	-	93	33.918	ENSLACG00000010042	-	81	33.908
ENSLACG00000008103	-	93	39.205	ENSLACG00000017799	RAB36	65	39.205
ENSLACG00000008103	-	97	42.373	ENSLACG00000011157	RAB25	80	42.373
ENSLACG00000008103	-	95	37.356	ENSLACG00000013980	rab41	80	37.356
ENSLACG00000008103	-	97	35.593	ENSLACG00000008809	zgc:100918	85	35.593
ENSLACG00000008103	-	96	36.313	ENSLACG00000002523	RAB29	85	36.313
ENSLACG00000008103	-	88	32.484	ENSLACG00000003722	rabl2	68	32.484
ENSLACG00000008103	-	89	47.239	ENSLACG00000016974	RAB11B	92	47.239
ENSLACG00000008103	-	94	46.429	ENSLACG00000006407	RAB30	83	46.429
ENSLACG00000008103	-	82	43.421	ENSLACG00000011557	zgc:101559	64	43.421
ENSLACG00000008103	-	97	43.169	ENSLACG00000012184	RAB11A	83	43.169
ENSLACG00000008103	-	88	38.125	ENSLACG00000001081	RAB34	62	38.125
ENSLACG00000008103	-	71	32.540	ENSLACG00000018793	RAN	82	32.540
ENSLACG00000008103	-	94	35.465	ENSLACG00000018428	NRAS	88	35.465
ENSLACG00000008103	-	97	39.888	ENSLACG00000016518	-	54	39.888
ENSLACG00000008103	-	90	37.267	ENSLACG00000007092	RAB22A	83	37.267
ENSLACG00000008103	-	90	32.370	ENSLACG00000003581	rasd3	77	32.370
ENSLACG00000008103	-	94	35.227	ENSLACG00000017464	KRAS	90	35.227
ENSLACG00000008103	-	95	37.143	ENSLACG00000012755	-	81	37.143
ENSLACG00000008103	-	97	41.279	ENSLACG00000012521	RAB2A	81	41.279
ENSLACG00000008103	-	98	40.782	ENSLACG00000011380	rab11al	80	40.782
ENSLACG00000008103	-	100	40.217	ENSLACG00000016074	RAB39B	85	40.217
ENSLACG00000008103	-	88	35.849	ENSLACG00000004025	RAB23	70	35.673
ENSLACG00000008103	-	69	31.148	ENSLACG00000003169	-	61	31.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008103	-	97	77.907	ENSG00000143545	RAB13	85	77.907	Homo_sapiens
ENSLACG00000008103	-	100	76.404	ENSACIG00000008584	rab13	86	76.404	Amphilophus_citrinellus
ENSLACG00000008103	-	97	78.488	ENSANAG00000030247	-	85	78.488	Aotus_nancymaae
ENSLACG00000008103	-	99	76.271	ENSAMXG00000030712	rab13	88	76.271	Astyanax_mexicanus
ENSLACG00000008103	-	97	77.907	ENSBTAG00000017604	RAB13	85	77.907	Bos_taurus
ENSLACG00000008103	-	96	40.936	WBGene00019317	K02E10.1	78	40.936	Caenorhabditis_elegans
ENSLACG00000008103	-	97	77.907	ENSCJAG00000009933	-	85	77.907	Callithrix_jacchus
ENSLACG00000008103	-	100	74.054	ENSCHIG00000022271	-	91	74.054	Capra_hircus
ENSLACG00000008103	-	100	75.281	ENSCPOG00000011491	-	88	75.281	Cavia_porcellus
ENSLACG00000008103	-	97	77.907	ENSCCAG00000028502	-	85	77.907	Cebus_capucinus
ENSLACG00000008103	-	97	77.907	ENSCATG00000041779	-	85	77.907	Cercocebus_atys
ENSLACG00000008103	-	100	75.281	ENSCLAG00000006603	-	88	75.281	Chinchilla_lanigera
ENSLACG00000008103	-	97	77.907	ENSCANG00000036573	-	85	77.907	Colobus_angolensis_palliatus
ENSLACG00000008103	-	97	78.488	ENSCGRG00001021505	Rab13	85	78.488	Cricetulus_griseus_chok1gshd
ENSLACG00000008103	-	97	78.488	ENSCGRG00000012126	Rab13	85	78.488	Cricetulus_griseus_crigri
ENSLACG00000008103	-	100	76.404	ENSCSEG00000002358	rab13	89	76.271	Cynoglossus_semilaevis
ENSLACG00000008103	-	99	77.401	ENSDARG00000034771	rab13	89	77.401	Danio_rerio
ENSLACG00000008103	-	97	77.907	ENSDORG00000001591	Rab13	85	77.907	Dipodomys_ordii
ENSLACG00000008103	-	97	77.907	ENSEASG00005000683	-	85	77.907	Equus_asinus_asinus
ENSLACG00000008103	-	97	77.907	ENSECAG00000016551	RAB13	85	77.907	Equus_caballus
ENSLACG00000008103	-	100	70.968	ENSEEUG00000001233	-	92	70.968	Erinaceus_europaeus
ENSLACG00000008103	-	99	74.576	ENSELUG00000012801	rab13	89	74.576	Esox_lucius
ENSLACG00000008103	-	97	77.326	ENSFCAG00000045269	-	85	77.326	Felis_catus
ENSLACG00000008103	-	64	92.982	ENSFDAG00000014469	-	86	92.982	Fukomys_damarensis
ENSLACG00000008103	-	100	78.090	ENSFHEG00000021221	rab13	97	78.090	Fundulus_heteroclitus
ENSLACG00000008103	-	99	75.706	ENSGACG00000011925	rab13	88	75.706	Gasterosteus_aculeatus
ENSLACG00000008103	-	99	79.545	ENSGAGG00000000742	-	88	79.545	Gopherus_agassizii
ENSLACG00000008103	-	97	77.907	ENSGGOG00000023693	RAB13	85	77.907	Gorilla_gorilla
ENSLACG00000008103	-	100	75.281	ENSHGLG00000008749	RAB13	88	75.281	Heterocephalus_glaber_female
ENSLACG00000008103	-	100	75.281	ENSHGLG00100013608	RAB13	88	75.281	Heterocephalus_glaber_male
ENSLACG00000008103	-	100	76.966	ENSHCOG00000007440	rab13	98	76.966	Hippocampus_comes
ENSLACG00000008103	-	99	76.836	ENSIPUG00000003199	rab13	88	76.836	Ictalurus_punctatus
ENSLACG00000008103	-	97	79.070	ENSSTOG00000011222	-	85	79.070	Ictidomys_tridecemlineatus
ENSLACG00000008103	-	100	76.404	ENSJJAG00000010575	Rab13	88	76.404	Jaculus_jaculus
ENSLACG00000008103	-	99	77.966	ENSKMAG00000001908	rab13	91	76.023	Kryptolebias_marmoratus
ENSLACG00000008103	-	99	76.271	ENSLBEG00000026779	rab13	89	76.271	Labrus_bergylta
ENSLACG00000008103	-	97	77.907	ENSMFAG00000041018	RAB13	85	77.907	Macaca_fascicularis
ENSLACG00000008103	-	97	77.907	ENSMNEG00000028951	-	85	77.907	Macaca_nemestrina
ENSLACG00000008103	-	97	77.907	ENSMLEG00000042247	-	85	77.907	Mandrillus_leucophaeus
ENSLACG00000008103	-	100	78.652	ENSMAMG00000014602	rab13	89	78.531	Mastacembelus_armatus
ENSLACG00000008103	-	97	79.070	ENSMAUG00000015713	Rab13	85	79.070	Mesocricetus_auratus
ENSLACG00000008103	-	98	77.143	ENSMICG00000010340	-	85	77.907	Microcebus_murinus
ENSLACG00000008103	-	97	79.070	ENSMOCG00000021448	Rab13	85	79.070	Microtus_ochrogaster
ENSLACG00000008103	-	99	76.796	ENSMODG00000017295	-	74	76.796	Monodelphis_domestica
ENSLACG00000008103	-	99	75.000	MGP_CAROLIEiJ_G0025227	Rab13	91	75.000	Mus_caroli
ENSLACG00000008103	-	99	75.000	ENSMUSG00000027935	Rab13	91	75.000	Mus_musculus
ENSLACG00000008103	-	97	78.488	MGP_PahariEiJ_G0026671	Rab13	85	78.488	Mus_pahari
ENSLACG00000008103	-	97	79.070	ENSNGAG00000010309	Rab13	85	79.070	Nannospalax_galili
ENSLACG00000008103	-	100	76.966	ENSNBRG00000004124	rab13	89	76.836	Neolamprologus_brichardi
ENSLACG00000008103	-	97	77.907	ENSNLEG00000028944	-	88	77.907	Nomascus_leucogenys
ENSLACG00000008103	-	99	75.824	ENSMEUG00000009667	-	87	75.824	Notamacropus_eugenii
ENSLACG00000008103	-	64	92.105	ENSODEG00000012634	-	90	92.105	Octodon_degus
ENSLACG00000008103	-	100	74.157	ENSODEG00000010443	-	88	74.157	Octodon_degus
ENSLACG00000008103	-	100	78.090	ENSONIG00000006340	rab13	88	78.090	Oreochromis_niloticus
ENSLACG00000008103	-	97	78.488	ENSOCUG00000006286	-	97	78.488	Oryctolagus_cuniculus
ENSLACG00000008103	-	100	78.652	ENSOMEG00000008210	rab13	89	78.531	Oryzias_melastigma
ENSLACG00000008103	-	97	78.488	ENSOGAG00000016969	-	86	78.488	Otolemur_garnettii
ENSLACG00000008103	-	97	77.907	ENSPPAG00000028435	-	85	77.907	Pan_paniscus
ENSLACG00000008103	-	97	77.326	ENSPPRG00000008865	-	85	77.326	Panthera_pardus
ENSLACG00000008103	-	97	77.907	ENSPTRG00000001370	RAB13	85	77.907	Pan_troglodytes
ENSLACG00000008103	-	97	77.907	ENSPANG00000004479	-	85	77.907	Papio_anubis
ENSLACG00000008103	-	100	75.843	ENSPMGG00000007680	rab13	88	76.136	Periophthalmus_magnuspinnatus
ENSLACG00000008103	-	63	94.643	ENSPEMG00000017353	-	84	94.643	Peromyscus_maniculatus_bairdii
ENSLACG00000008103	-	99	75.824	ENSPCIG00000029350	-	87	75.824	Phascolarctos_cinereus
ENSLACG00000008103	-	100	78.652	ENSPLAG00000005832	RAB13	95	78.652	Poecilia_latipinna
ENSLACG00000008103	-	99	78.531	ENSPREG00000017567	rab13	89	78.531	Poecilia_reticulata
ENSLACG00000008103	-	97	77.907	ENSPPYG00000000790	-	85	77.907	Pongo_abelii
ENSLACG00000008103	-	97	78.488	ENSPCOG00000012189	-	85	78.488	Propithecus_coquereli
ENSLACG00000008103	-	97	78.488	ENSPVAG00000011095	-	85	78.488	Pteropus_vampyrus
ENSLACG00000008103	-	100	78.090	ENSPNAG00000004189	rab13	94	78.090	Pygocentrus_nattereri
ENSLACG00000008103	-	97	78.488	ENSRNOG00000016733	Rab13	85	78.488	Rattus_norvegicus
ENSLACG00000008103	-	97	77.907	ENSRBIG00000008552	-	85	77.907	Rhinopithecus_bieti
ENSLACG00000008103	-	97	77.907	ENSRROG00000036885	-	85	77.907	Rhinopithecus_roxellana
ENSLACG00000008103	-	97	77.907	ENSSBOG00000020342	-	85	77.907	Saimiri_boliviensis_boliviensis
ENSLACG00000008103	-	99	76.796	ENSSHAG00000011866	-	87	76.374	Sarcophilus_harrisii
ENSLACG00000008103	-	97	77.907	ENSSSCG00000006564	-	85	77.907	Sus_scrofa
ENSLACG00000008103	-	99	76.271	ENSTRUG00000024177	rab13	89	76.271	Takifugu_rubripes
ENSLACG00000008103	-	97	79.070	ENSTBEG00000012734	-	85	79.070	Tupaia_belangeri
ENSLACG00000008103	-	97	77.907	ENSTTRG00000011183	-	85	77.907	Tursiops_truncatus
ENSLACG00000008103	-	76	69.630	ENSXETG00000020729	rab13	84	69.630	Xenopus_tropicalis
ENSLACG00000008103	-	100	78.090	ENSXCOG00000019533	rab13	95	78.090	Xiphophorus_couchianus