EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 188036 bases
Position: chrJH126670.1:325649-513684
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009276	AF-4	PF05110.13	3.7e-151	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009347	-	1410	-	ENSLACP00000009276	447 (aa)	-	H3AI05

Gene Model

Click here to download ENSLACG00000008183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008183	-	75	44.413	ENSLACG00000003828	-	95	45.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008183	-	99	54.043	ENSG00000155966	AFF2	99	51.188	Homo_sapiens
ENSLACG00000008183	-	98	37.124	ENSG00000172493	AFF1	99	35.646	Homo_sapiens
ENSLACG00000008183	-	64	68.367	ENSG00000144218	AFF3	79	75.641	Homo_sapiens
ENSLACG00000008183	-	74	40.361	ENSAPLG00000016085	-	95	40.663	Anas_platyrhynchos
ENSLACG00000008183	-	78	54.986	ENSTSYG00000036097	-	100	54.416	Carlito_syrichta
ENSLACG00000008183	-	96	41.002	ENSCPOG00000006346	AFF3	80	69.512	Cavia_porcellus
ENSLACG00000008183	-	96	41.686	ENSCLAG00000017100	AFF3	89	65.934	Chinchilla_lanigera
ENSLACG00000008183	-	64	65.000	ENSCGRG00000003408	Aff3	89	63.736	Cricetulus_griseus_crigri
ENSLACG00000008183	-	75	38.757	ENSDNOG00000047074	-	92	39.349	Dasypus_novemcinctus
ENSLACG00000008183	-	64	67.347	ENSDORG00000007294	Aff3	89	65.934	Dipodomys_ordii
ENSLACG00000008183	-	75	39.349	ENSFALG00000003872	-	99	38.192	Ficedula_albicollis
ENSLACG00000008183	-	91	32.000	ENSGACG00000016333	-	99	32.020	Gasterosteus_aculeatus
ENSLACG00000008183	-	85	40.256	ENSGAGG00000025416	-	96	39.750	Gopherus_agassizii
ENSLACG00000008183	-	74	71.045	ENSGAGG00000024556	-	93	72.537	Gopherus_agassizii
ENSLACG00000008183	-	66	40.404	ENSGAGG00000003871	-	75	40.614	Gopherus_agassizii
ENSLACG00000008183	-	96	40.319	ENSSTOG00000026695	AFF4	87	51.402	Ictidomys_tridecemlineatus
ENSLACG00000008183	-	65	67.327	ENSSTOG00000012140	AFF3	83	65.934	Ictidomys_tridecemlineatus
ENSLACG00000008183	-	96	41.913	ENSJJAG00000013155	Aff3	89	64.835	Jaculus_jaculus
ENSLACG00000008183	-	97	52.097	ENSLAFG00000018691	AFF2	100	55.352	Loxodonta_africana
ENSLACG00000008183	-	50	90.141	ENSMZEG00005005467	-	87	40.369	Maylandia_zebra
ENSLACG00000008183	-	66	70.569	ENSMGAG00000008263	-	100	73.667	Meleagris_gallopavo
ENSLACG00000008183	-	74	40.060	ENSMGAG00000014794	-	92	39.286	Meleagris_gallopavo
ENSLACG00000008183	-	85	34.704	ENSMMOG00000002118	-	98	35.176	Mola_mola
ENSLACG00000008183	-	75	38.372	ENSMODG00000001458	-	94	38.416	Monodelphis_domestica
ENSLACG00000008183	-	96	40.766	ENSMUSG00000037138	Aff3	68	70.732	Mus_musculus
ENSLACG00000008183	-	96	38.865	ENSMLUG00000015255	AFF3	70	50.704	Myotis_lucifugus
ENSLACG00000008183	-	96	41.230	ENSNGAG00000002408	Aff3	76	65.934	Nannospalax_galili
ENSLACG00000008183	-	50	88.889	ENSNBRG00000022193	-	63	88.889	Neolamprologus_brichardi
ENSLACG00000008183	-	63	68.421	ENSOANG00000001096	-	99	68.092	Ornithorhynchus_anatinus
ENSLACG00000008183	-	97	52.000	ENSPTIG00000018890	AFF2	96	51.556	Panthera_tigris_altaica
ENSLACG00000008183	-	96	40.547	ENSPEMG00000014802	Aff3	89	64.835	Peromyscus_maniculatus_bairdii
ENSLACG00000008183	-	74	54.925	ENSRBIG00000040484	-	94	54.925	Rhinopithecus_bieti
ENSLACG00000008183	-	75	55.621	ENSRROG00000032529	-	84	54.942	Rhinopithecus_roxellana
ENSLACG00000008183	-	96	41.723	ENSSBOG00000021562	AFF4	96	41.795	Saimiri_boliviensis_boliviensis
ENSLACG00000008183	-	66	41.584	ENSSHAG00000014244	-	95	40.984	Sarcophilus_harrisii
ENSLACG00000008183	-	97	56.208	ENSSHAG00000009556	AFF2	99	59.104	Sarcophilus_harrisii
ENSLACG00000008183	-	51	40.161	ENSSFOG00015000839	-	99	36.449	Scleropages_formosus
ENSLACG00000008183	-	91	45.863	ENSSFOG00015009105	-	95	47.174	Scleropages_formosus
ENSLACG00000008183	-	89	33.659	ENSSMAG00000007062	-	98	32.688	Scophthalmus_maximus
ENSLACG00000008183	-	85	46.135	ENSSDUG00000013932	-	89	46.384	Seriola_dumerili
ENSLACG00000008183	-	85	46.040	ENSSLDG00000022289	-	88	46.287	Seriola_lalandi_dorsalis
ENSLACG00000008183	-	78	39.227	ENSTGUG00000010070	-	94	39.779	Taeniopygia_guttata