EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008247 (Gene tree)
Gene ID: 102356935
Gene Symbol: NUP35
Alias: MP44
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 9773 bases
Position: chrJH127103.1:329986-339758
Accession: 102356935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009348	Nup35_RRM	PF05172.13	1.4e-27	1	1
ENSLACP00000009349	Nup35_RRM	PF05172.13	1.7e-27	1	1
ENSLACP00000009348	Nup35_RRM_2	PF14605.6	1e-11	1	1
ENSLACP00000009349	Nup35_RRM_2	PF14605.6	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009420	NUP35-202	1032	XM_005999675	ENSLACP00000009349	343 (aa)	XP_005999737	H3AI78
ENSLACT00000009419	NUP35-201	1592	XM_005999676	ENSLACP00000009348	311 (aa)	XP_005999738	H3AI77

Gene Model

Click here to download ENSLACG00000008247's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008247	NUP35	100	79.421	ENSG00000163002	NUP35	100	81.818	Homo_sapiens
ENSLACG00000008247	NUP35	100	58.599	ENSAPOG00000003630	nup35	97	58.991	Acanthochromis_polyacanthus
ENSLACG00000008247	NUP35	100	77.955	ENSAMEG00000001191	NUP35	95	77.955	Ailuropoda_melanoleuca
ENSLACG00000008247	NUP35	85	61.597	ENSACIG00000023984	nup35	98	61.390	Amphilophus_citrinellus
ENSLACG00000008247	NUP35	100	58.125	ENSAOCG00000007484	nup35	97	58.438	Amphiprion_ocellaris
ENSLACG00000008247	NUP35	100	58.438	ENSAPEG00000020027	nup35	97	58.750	Amphiprion_percula
ENSLACG00000008247	NUP35	100	62.379	ENSATEG00000019305	nup35	97	62.500	Anabas_testudineus
ENSLACG00000008247	NUP35	100	80.386	ENSAPLG00000009161	NUP35	95	80.386	Anas_platyrhynchos
ENSLACG00000008247	NUP35	100	76.849	ENSACAG00000008692	NUP35	94	76.849	Anolis_carolinensis
ENSLACG00000008247	NUP35	100	78.778	ENSANAG00000021090	NUP35	95	78.778	Aotus_nancymaae
ENSLACG00000008247	NUP35	100	61.146	ENSACLG00000013918	nup35	97	59.752	Astatotilapia_calliptera
ENSLACG00000008247	NUP35	100	74.920	ENSAMXG00000003371	nup35	100	74.920	Astyanax_mexicanus
ENSLACG00000008247	NUP35	100	79.100	ENSBTAG00000009777	NUP35	95	79.100	Bos_taurus
ENSLACG00000008247	NUP35	100	79.421	ENSCJAG00000011104	NUP35	95	79.421	Callithrix_jacchus
ENSLACG00000008247	NUP35	100	78.275	ENSCAFG00000031849	NUP35	100	78.275	Canis_familiaris
ENSLACG00000008247	NUP35	100	78.275	ENSCAFG00020008408	NUP35	95	78.275	Canis_lupus_dingo
ENSLACG00000008247	NUP35	100	79.100	ENSCHIG00000023148	NUP35	100	79.100	Capra_hircus
ENSLACG00000008247	NUP35	100	77.170	ENSTSYG00000002117	NUP35	95	77.170	Carlito_syrichta
ENSLACG00000008247	NUP35	100	65.495	ENSCAPG00000005703	NUP35	96	65.495	Cavia_aperea
ENSLACG00000008247	NUP35	100	79.100	ENSCPOG00000011906	NUP35	96	79.100	Cavia_porcellus
ENSLACG00000008247	NUP35	100	79.421	ENSCCAG00000025009	NUP35	99	81.726	Cebus_capucinus
ENSLACG00000008247	NUP35	100	66.881	ENSCATG00000033109	NUP35	94	66.881	Cercocebus_atys
ENSLACG00000008247	NUP35	100	78.457	ENSCLAG00000012559	NUP35	95	78.457	Chinchilla_lanigera
ENSLACG00000008247	NUP35	100	79.100	ENSCSAG00000012620	NUP35	95	79.100	Chlorocebus_sabaeus
ENSLACG00000008247	NUP35	100	80.064	ENSCPBG00000001303	NUP35	95	80.064	Chrysemys_picta_bellii
ENSLACG00000008247	NUP35	99	45.652	ENSCING00000009659	-	97	45.652	Ciona_intestinalis
ENSLACG00000008247	NUP35	99	42.982	ENSCSAVG00000007467	-	98	42.982	Ciona_savignyi
ENSLACG00000008247	NUP35	100	79.100	ENSCANG00000030785	NUP35	98	82.653	Colobus_angolensis_palliatus
ENSLACG00000008247	NUP35	100	78.778	ENSCGRG00001018638	-	95	78.778	Cricetulus_griseus_chok1gshd
ENSLACG00000008247	NUP35	100	78.778	ENSCGRG00000011313	-	95	78.778	Cricetulus_griseus_crigri
ENSLACG00000008247	NUP35	100	60.625	ENSCSEG00000000938	nup35	97	60.625	Cynoglossus_semilaevis
ENSLACG00000008247	NUP35	100	62.821	ENSCVAG00000001792	nup35	97	62.821	Cyprinodon_variegatus
ENSLACG00000008247	NUP35	100	75.884	ENSDARG00000012222	nup35	100	75.884	Danio_rerio
ENSLACG00000008247	NUP35	100	76.206	ENSDNOG00000038754	-	95	76.206	Dasypus_novemcinctus
ENSLACG00000008247	NUP35	100	76.849	ENSDNOG00000009513	-	84	76.849	Dasypus_novemcinctus
ENSLACG00000008247	NUP35	100	79.421	ENSDORG00000010458	-	96	79.421	Dipodomys_ordii
ENSLACG00000008247	NUP35	100	77.814	ENSETEG00000005896	NUP35	99	77.814	Echinops_telfairi
ENSLACG00000008247	NUP35	100	54.769	ENSEBUG00000013034	nup35	98	54.769	Eptatretus_burgeri
ENSLACG00000008247	NUP35	100	78.457	ENSEASG00005022100	NUP35	95	78.457	Equus_asinus_asinus
ENSLACG00000008247	NUP35	100	78.778	ENSECAG00000003968	NUP35	100	78.778	Equus_caballus
ENSLACG00000008247	NUP35	100	68.489	ENSEEUG00000008469	NUP35	95	68.489	Erinaceus_europaeus
ENSLACG00000008247	NUP35	100	75.563	ENSELUG00000013693	nup35	100	75.563	Esox_lucius
ENSLACG00000008247	NUP35	100	77.316	ENSFCAG00000025636	NUP35	100	77.636	Felis_catus
ENSLACG00000008247	NUP35	100	77.244	ENSFALG00000013175	NUP35	95	77.244	Ficedula_albicollis
ENSLACG00000008247	NUP35	100	78.135	ENSFDAG00000017998	NUP35	95	78.135	Fukomys_damarensis
ENSLACG00000008247	NUP35	100	64.103	ENSFHEG00000010229	nup35	97	64.103	Fundulus_heteroclitus
ENSLACG00000008247	NUP35	82	59.144	ENSGMOG00000003337	nup35	100	59.144	Gadus_morhua
ENSLACG00000008247	NUP35	100	77.814	ENSGALG00000002689	NUP35	95	77.814	Gallus_gallus
ENSLACG00000008247	NUP35	100	62.420	ENSGAFG00000022048	nup35	97	63.057	Gambusia_affinis
ENSLACG00000008247	NUP35	100	60.577	ENSGACG00000008203	nup35	97	60.577	Gasterosteus_aculeatus
ENSLACG00000008247	NUP35	100	80.128	ENSGAGG00000001967	NUP35	100	80.128	Gopherus_agassizii
ENSLACG00000008247	NUP35	100	79.421	ENSGGOG00000009919	NUP35	99	80.296	Gorilla_gorilla
ENSLACG00000008247	NUP35	97	65.017	ENSHGLG00000008616	-	92	65.017	Heterocephalus_glaber_female
ENSLACG00000008247	NUP35	100	60.129	ENSHGLG00000000414	-	96	60.129	Heterocephalus_glaber_female
ENSLACG00000008247	NUP35	100	77.814	ENSHGLG00000013230	NUP35	95	77.814	Heterocephalus_glaber_female
ENSLACG00000008247	NUP35	100	77.814	ENSHGLG00100012840	NUP35	95	77.814	Heterocephalus_glaber_male
ENSLACG00000008247	NUP35	100	60.129	ENSHGLG00100010869	-	96	60.129	Heterocephalus_glaber_male
ENSLACG00000008247	NUP35	97	65.017	ENSHGLG00100000091	-	93	65.017	Heterocephalus_glaber_male
ENSLACG00000008247	NUP35	100	59.295	ENSHCOG00000003882	nup35	97	59.295	Hippocampus_comes
ENSLACG00000008247	NUP35	100	69.453	ENSIPUG00000002798	nup35	97	69.453	Ictalurus_punctatus
ENSLACG00000008247	NUP35	100	78.457	ENSSTOG00000000711	NUP35	95	78.457	Ictidomys_tridecemlineatus
ENSLACG00000008247	NUP35	99	69.677	ENSJJAG00000017434	-	94	69.677	Jaculus_jaculus
ENSLACG00000008247	NUP35	88	71.533	ENSJJAG00000006387	-	99	65.094	Jaculus_jaculus
ENSLACG00000008247	NUP35	100	77.170	ENSJJAG00000016432	-	96	77.170	Jaculus_jaculus
ENSLACG00000008247	NUP35	100	65.916	ENSJJAG00000007003	-	93	65.916	Jaculus_jaculus
ENSLACG00000008247	NUP35	100	60.000	ENSKMAG00000011162	nup35	97	60.317	Kryptolebias_marmoratus
ENSLACG00000008247	NUP35	100	50.804	ENSLBEG00000012416	nup35	97	50.804	Labrus_bergylta
ENSLACG00000008247	NUP35	100	77.814	ENSLOCG00000006726	nup35	97	78.457	Lepisosteus_oculatus
ENSLACG00000008247	NUP35	100	77.532	ENSLAFG00000008155	NUP35	95	77.532	Loxodonta_africana
ENSLACG00000008247	NUP35	100	78.778	ENSMFAG00000000834	NUP35	100	78.778	Macaca_fascicularis
ENSLACG00000008247	NUP35	100	79.100	ENSMMUG00000004140	NUP35	98	79.100	Macaca_mulatta
ENSLACG00000008247	NUP35	100	79.100	ENSMNEG00000029014	NUP35	95	79.100	Macaca_nemestrina
ENSLACG00000008247	NUP35	100	79.100	ENSMLEG00000035422	NUP35	98	82.653	Mandrillus_leucophaeus
ENSLACG00000008247	NUP35	100	61.859	ENSMAMG00000013232	nup35	97	61.859	Mastacembelus_armatus
ENSLACG00000008247	NUP35	100	60.883	ENSMZEG00005020619	nup35	93	60.883	Maylandia_zebra
ENSLACG00000008247	NUP35	100	76.206	ENSMGAG00000004412	NUP35	95	76.206	Meleagris_gallopavo
ENSLACG00000008247	NUP35	100	79.421	ENSMAUG00000013776	-	95	79.421	Mesocricetus_auratus
ENSLACG00000008247	NUP35	100	78.778	ENSMICG00000006790	NUP35	100	78.778	Microcebus_murinus
ENSLACG00000008247	NUP35	100	78.135	ENSMOCG00000014754	-	95	78.135	Microtus_ochrogaster
ENSLACG00000008247	NUP35	100	59.048	ENSMMOG00000005026	nup35	97	59.048	Mola_mola
ENSLACG00000008247	NUP35	100	79.421	ENSMODG00000010578	NUP35	95	79.421	Monodelphis_domestica
ENSLACG00000008247	NUP35	100	61.218	ENSMALG00000020187	nup35	97	61.218	Monopterus_albus
ENSLACG00000008247	NUP35	100	78.778	MGP_CAROLIEiJ_G0023709	-	95	78.778	Mus_caroli
ENSLACG00000008247	NUP35	100	78.778	ENSMUSG00000026999	Nup35	95	78.778	Mus_musculus
ENSLACG00000008247	NUP35	100	79.421	MGP_PahariEiJ_G0025160	-	95	79.421	Mus_pahari
ENSLACG00000008247	NUP35	86	69.103	MGP_SPRETEiJ_G0033063	-	100	69.103	Mus_spretus
ENSLACG00000008247	NUP35	100	78.594	ENSMPUG00000002063	NUP35	95	78.914	Mustela_putorius_furo
ENSLACG00000008247	NUP35	100	79.421	ENSMLUG00000013154	NUP35	95	79.421	Myotis_lucifugus
ENSLACG00000008247	NUP35	100	76.849	ENSNGAG00000012107	-	95	76.849	Nannospalax_galili
ENSLACG00000008247	NUP35	100	60.577	ENSNBRG00000020466	nup35	95	61.270	Neolamprologus_brichardi
ENSLACG00000008247	NUP35	100	79.421	ENSNLEG00000035026	NUP35	100	79.421	Nomascus_leucogenys
ENSLACG00000008247	NUP35	68	60.476	ENSMEUG00000003001	-	64	60.476	Notamacropus_eugenii
ENSLACG00000008247	NUP35	82	77.734	ENSOPRG00000016609	NUP35	78	77.734	Ochotona_princeps
ENSLACG00000008247	NUP35	99	55.987	ENSODEG00000000280	-	93	55.987	Octodon_degus
ENSLACG00000008247	NUP35	100	78.778	ENSODEG00000011202	-	95	78.778	Octodon_degus
ENSLACG00000008247	NUP35	100	60.952	ENSONIG00000016251	nup35	97	59.877	Oreochromis_niloticus
ENSLACG00000008247	NUP35	74	78.970	ENSOANG00000006793	-	95	78.970	Ornithorhynchus_anatinus
ENSLACG00000008247	NUP35	100	79.421	ENSOCUG00000014407	NUP35	95	79.421	Oryctolagus_cuniculus
ENSLACG00000008247	NUP35	100	62.382	ENSORLG00000013588	nup35	100	62.382	Oryzias_latipes
ENSLACG00000008247	NUP35	100	62.382	ENSORLG00020008201	nup35	97	62.382	Oryzias_latipes_hni
ENSLACG00000008247	NUP35	100	61.905	ENSORLG00015011096	nup35	100	61.905	Oryzias_latipes_hsok
ENSLACG00000008247	NUP35	100	61.755	ENSOMEG00000007628	nup35	97	61.755	Oryzias_melastigma
ENSLACG00000008247	NUP35	100	78.135	ENSOGAG00000011920	NUP35	95	78.135	Otolemur_garnettii
ENSLACG00000008247	NUP35	100	79.100	ENSOARG00000016728	NUP35	95	79.100	Ovis_aries
ENSLACG00000008247	NUP35	100	79.421	ENSPPAG00000036316	NUP35	100	79.421	Pan_paniscus
ENSLACG00000008247	NUP35	100	77.636	ENSPPRG00000024726	NUP35	100	77.955	Panthera_pardus
ENSLACG00000008247	NUP35	100	77.636	ENSPTIG00000017299	NUP35	95	77.955	Panthera_tigris_altaica
ENSLACG00000008247	NUP35	100	79.421	ENSPTRG00000012711	NUP35	100	79.421	Pan_troglodytes
ENSLACG00000008247	NUP35	100	79.100	ENSPANG00000013686	NUP35	95	79.100	Papio_anubis
ENSLACG00000008247	NUP35	100	76.527	ENSPKIG00000022051	nup35	98	76.849	Paramormyrops_kingsleyae
ENSLACG00000008247	NUP35	100	79.743	ENSPSIG00000002146	NUP35	100	79.743	Pelodiscus_sinensis
ENSLACG00000008247	NUP35	100	57.051	ENSPMGG00000022915	nup35	97	57.051	Periophthalmus_magnuspinnatus
ENSLACG00000008247	NUP35	100	79.421	ENSPEMG00000014718	-	95	79.421	Peromyscus_maniculatus_bairdii
ENSLACG00000008247	NUP35	100	56.386	ENSPMAG00000006604	nup35	96	56.386	Petromyzon_marinus
ENSLACG00000008247	NUP35	100	79.743	ENSPCIG00000015482	NUP35	95	79.743	Phascolarctos_cinereus
ENSLACG00000008247	NUP35	100	61.783	ENSPFOG00000010020	nup35	97	62.420	Poecilia_formosa
ENSLACG00000008247	NUP35	100	61.465	ENSPLAG00000005867	nup35	97	62.102	Poecilia_latipinna
ENSLACG00000008247	NUP35	100	62.701	ENSPMEG00000010552	nup35	97	62.701	Poecilia_mexicana
ENSLACG00000008247	NUP35	100	62.379	ENSPREG00000021005	nup35	97	62.379	Poecilia_reticulata
ENSLACG00000008247	NUP35	100	79.421	ENSPPYG00000012998	-	76	79.421	Pongo_abelii
ENSLACG00000008247	NUP35	100	55.305	ENSPCAG00000000605	NUP35	95	55.305	Procavia_capensis
ENSLACG00000008247	NUP35	100	79.100	ENSPCOG00000024097	NUP35	95	79.100	Propithecus_coquereli
ENSLACG00000008247	NUP35	100	78.457	ENSPVAG00000015908	NUP35	95	78.457	Pteropus_vampyrus
ENSLACG00000008247	NUP35	100	61.415	ENSPNYG00000012486	nup35	93	61.415	Pundamilia_nyererei
ENSLACG00000008247	NUP35	100	76.206	ENSPNAG00000005181	nup35	97	76.206	Pygocentrus_nattereri
ENSLACG00000008247	NUP35	100	80.386	ENSRNOG00000009290	Nup35	95	80.386	Rattus_norvegicus
ENSLACG00000008247	NUP35	100	79.100	ENSRBIG00000039427	NUP35	98	82.653	Rhinopithecus_bieti
ENSLACG00000008247	NUP35	100	78.778	ENSRROG00000026525	NUP35	98	82.653	Rhinopithecus_roxellana
ENSLACG00000008247	NUP35	100	79.100	ENSSBOG00000018676	NUP35	99	81.726	Saimiri_boliviensis_boliviensis
ENSLACG00000008247	NUP35	100	78.135	ENSSHAG00000009746	NUP35	95	78.135	Sarcophilus_harrisii
ENSLACG00000008247	NUP35	100	76.849	ENSSFOG00015002390	nup35	97	76.849	Scleropages_formosus
ENSLACG00000008247	NUP35	100	60.577	ENSSMAG00000015651	nup35	97	60.577	Scophthalmus_maximus
ENSLACG00000008247	NUP35	100	61.415	ENSSDUG00000013118	nup35	97	60.252	Seriola_dumerili
ENSLACG00000008247	NUP35	100	60.443	ENSSLDG00000018249	nup35	97	60.443	Seriola_lalandi_dorsalis
ENSLACG00000008247	NUP35	100	58.521	ENSSARG00000001535	-	99	58.521	Sorex_araneus
ENSLACG00000008247	NUP35	100	77.492	ENSSPUG00000018651	NUP35	95	77.492	Sphenodon_punctatus
ENSLACG00000008247	NUP35	100	60.450	ENSSPAG00000018264	nup35	97	60.000	Stegastes_partitus
ENSLACG00000008247	NUP35	100	79.100	ENSSSCG00000028949	NUP35	95	79.100	Sus_scrofa
ENSLACG00000008247	NUP35	100	75.399	ENSTGUG00000011278	NUP35	95	75.399	Taeniopygia_guttata
ENSLACG00000008247	NUP35	93	55.705	ENSTRUG00000014111	nup35	97	55.705	Takifugu_rubripes
ENSLACG00000008247	NUP35	100	51.768	ENSTNIG00000011568	nup35	94	51.768	Tetraodon_nigroviridis
ENSLACG00000008247	NUP35	100	74.920	ENSTBEG00000003328	NUP35	95	74.920	Tupaia_belangeri
ENSLACG00000008247	NUP35	100	66.238	ENSTTRG00000002512	NUP35	94	66.238	Tursiops_truncatus
ENSLACG00000008247	NUP35	66	78.537	ENSUAMG00000018696	-	99	78.537	Ursus_americanus
ENSLACG00000008247	NUP35	92	76.125	ENSUMAG00000017104	NUP35	94	76.471	Ursus_maritimus
ENSLACG00000008247	NUP35	100	78.457	ENSVPAG00000011898	NUP35	95	78.457	Vicugna_pacos
ENSLACG00000008247	NUP35	100	78.594	ENSVVUG00000016832	NUP35	100	78.594	Vulpes_vulpes
ENSLACG00000008247	NUP35	100	67.628	ENSXETG00000001335	nup35	94	67.628	Xenopus_tropicalis
ENSLACG00000008247	NUP35	100	62.739	ENSXMAG00000000409	nup35	97	63.376	Xiphophorus_maculatus