EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008312 (Gene tree)
Gene ID: 102349760
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 76229 bases
Position: chrJH127502.1:334052-410280
Accession: 102349760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009424	CPL	PF08144.11	1.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009496	PUM3-201	1946	XM_006003543	ENSLACP00000009424	641 (aa)	XP_006003605	H3AIF3

Gene Model

Click here to download ENSLACG00000008312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008312	PUM3	99	66.104	ENSG00000080608	PUM3	99	65.491	Homo_sapiens
ENSLACG00000008312	PUM3	99	54.268	ENSAPOG00000020252	pum3	99	53.976	Acanthochromis_polyacanthus
ENSLACG00000008312	PUM3	97	66.667	ENSAMEG00000012187	PUM3	100	66.309	Ailuropoda_melanoleuca
ENSLACG00000008312	PUM3	87	54.690	ENSACIG00000009786	pum3	88	56.121	Amphilophus_citrinellus
ENSLACG00000008312	PUM3	99	54.351	ENSAOCG00000004439	pum3	99	53.707	Amphiprion_ocellaris
ENSLACG00000008312	PUM3	99	54.351	ENSAPEG00000020523	pum3	99	53.707	Amphiprion_percula
ENSLACG00000008312	PUM3	87	59.091	ENSATEG00000005799	pum3	89	58.916	Anabas_testudineus
ENSLACG00000008312	PUM3	96	70.927	ENSAPLG00000002920	PUM3	100	70.720	Anas_platyrhynchos
ENSLACG00000008312	PUM3	93	67.279	ENSACAG00000003174	PUM3	99	67.112	Anolis_carolinensis
ENSLACG00000008312	PUM3	99	66.770	ENSANAG00000024520	PUM3	99	66.770	Aotus_nancymaae
ENSLACG00000008312	PUM3	99	53.030	ENSACLG00000001017	pum3	99	52.959	Astatotilapia_calliptera
ENSLACG00000008312	PUM3	99	64.752	ENSAMXG00000020911	pum3	100	64.230	Astyanax_mexicanus
ENSLACG00000008312	PUM3	97	67.925	ENSBTAG00000013357	PUM3	100	67.534	Bos_taurus
ENSLACG00000008312	PUM3	74	31.470	WBGene00014165	puf-12	62	31.470	Caenorhabditis_elegans
ENSLACG00000008312	PUM3	99	66.615	ENSCJAG00000010917	PUM3	99	66.615	Callithrix_jacchus
ENSLACG00000008312	PUM3	96	68.102	ENSCAFG00000002035	PUM3	99	67.075	Canis_familiaris
ENSLACG00000008312	PUM3	96	68.102	ENSCAFG00020026867	PUM3	99	67.075	Canis_lupus_dingo
ENSLACG00000008312	PUM3	97	67.610	ENSCHIG00000021559	PUM3	100	67.228	Capra_hircus
ENSLACG00000008312	PUM3	99	67.079	ENSTSYG00000007481	PUM3	99	67.079	Carlito_syrichta
ENSLACG00000008312	PUM3	99	64.297	ENSCAPG00000010592	-	99	64.297	Cavia_aperea
ENSLACG00000008312	PUM3	99	65.170	ENSCPOG00000008552	-	91	68.761	Cavia_porcellus
ENSLACG00000008312	PUM3	99	66.615	ENSCCAG00000032650	PUM3	99	66.615	Cebus_capucinus
ENSLACG00000008312	PUM3	99	67.233	ENSCATG00000024880	PUM3	99	67.233	Cercocebus_atys
ENSLACG00000008312	PUM3	100	66.769	ENSCLAG00000011892	PUM3	99	66.769	Chinchilla_lanigera
ENSLACG00000008312	PUM3	99	67.079	ENSCSAG00000008691	PUM3	99	67.079	Chlorocebus_sabaeus
ENSLACG00000008312	PUM3	97	50.709	ENSCHOG00000002535	PUM3	95	50.767	Choloepus_hoffmanni
ENSLACG00000008312	PUM3	100	71.451	ENSCPBG00000025470	PUM3	95	71.295	Chrysemys_picta_bellii
ENSLACG00000008312	PUM3	78	38.943	ENSCING00000024199	-	87	39.308	Ciona_intestinalis
ENSLACG00000008312	PUM3	90	37.353	ENSCSAVG00000006072	-	99	38.213	Ciona_savignyi
ENSLACG00000008312	PUM3	99	67.079	ENSCANG00000006142	PUM3	99	67.079	Colobus_angolensis_palliatus
ENSLACG00000008312	PUM3	100	66.769	ENSCGRG00001016402	Pum3	99	65.350	Cricetulus_griseus_chok1gshd
ENSLACG00000008312	PUM3	100	66.769	ENSCGRG00000010207	Pum3	99	65.350	Cricetulus_griseus_crigri
ENSLACG00000008312	PUM3	80	58.700	ENSCSEG00000001565	pum3	91	58.286	Cynoglossus_semilaevis
ENSLACG00000008312	PUM3	66	52.720	ENSCVAG00000006550	pum3	99	52.066	Cyprinodon_variegatus
ENSLACG00000008312	PUM3	98	64.501	ENSDARG00000087779	pum3	100	62.578	Danio_rerio
ENSLACG00000008312	PUM3	100	59.847	ENSDNOG00000008157	PUM3	70	60.184	Dasypus_novemcinctus
ENSLACG00000008312	PUM3	82	66.856	ENSETEG00000015331	PUM3	84	67.642	Echinops_telfairi
ENSLACG00000008312	PUM3	81	39.400	ENSEBUG00000011586	pum3	75	39.723	Eptatretus_burgeri
ENSLACG00000008312	PUM3	96	67.464	ENSEASG00005010350	PUM3	100	66.462	Equus_asinus_asinus
ENSLACG00000008312	PUM3	96	67.783	ENSECAG00000017193	PUM3	100	66.769	Equus_caballus
ENSLACG00000008312	PUM3	90	62.775	ENSEEUG00000010314	PUM3	100	61.338	Erinaceus_europaeus
ENSLACG00000008312	PUM3	97	62.003	ENSELUG00000002215	pum3	90	64.138	Esox_lucius
ENSLACG00000008312	PUM3	100	71.053	ENSFALG00000010509	PUM3	100	71.053	Ficedula_albicollis
ENSLACG00000008312	PUM3	100	65.391	ENSFDAG00000021027	PUM3	99	63.982	Fukomys_damarensis
ENSLACG00000008312	PUM3	91	57.480	ENSFHEG00000015576	pum3	99	57.480	Fundulus_heteroclitus
ENSLACG00000008312	PUM3	83	57.196	ENSGMOG00000014217	pum3	99	57.196	Gadus_morhua
ENSLACG00000008312	PUM3	99	68.624	ENSGALG00000010178	PUM3	100	69.147	Gallus_gallus
ENSLACG00000008312	PUM3	56	57.064	ENSGAFG00000001930	pum3	62	57.064	Gambusia_affinis
ENSLACG00000008312	PUM3	83	58.757	ENSGACG00000017878	pum3	97	58.790	Gasterosteus_aculeatus
ENSLACG00000008312	PUM3	99	72.283	ENSGAGG00000018983	PUM3	99	72.126	Gopherus_agassizii
ENSLACG00000008312	PUM3	99	66.461	ENSGGOG00000006143	PUM3	99	66.461	Gorilla_gorilla
ENSLACG00000008312	PUM3	99	49.610	ENSHBUG00000012903	pum3	99	49.922	Haplochromis_burtoni
ENSLACG00000008312	PUM3	100	66.003	ENSHGLG00000015868	-	99	64.742	Heterocephalus_glaber_female
ENSLACG00000008312	PUM3	100	66.003	ENSHGLG00100018825	PUM3	100	64.742	Heterocephalus_glaber_male
ENSLACG00000008312	PUM3	99	54.389	ENSHCOG00000010306	pum3	92	54.219	Hippocampus_comes
ENSLACG00000008312	PUM3	94	65.124	ENSIPUG00000024801	pum3	100	62.422	Ictalurus_punctatus
ENSLACG00000008312	PUM3	99	66.462	ENSSTOG00000009586	PUM3	99	65.697	Ictidomys_tridecemlineatus
ENSLACG00000008312	PUM3	99	64.417	ENSJJAG00000012563	Pum3	91	68.367	Jaculus_jaculus
ENSLACG00000008312	PUM3	93	56.856	ENSKMAG00000010277	pum3	99	55.470	Kryptolebias_marmoratus
ENSLACG00000008312	PUM3	99	52.790	ENSLBEG00000012213	pum3	99	53.233	Labrus_bergylta
ENSLACG00000008312	PUM3	98	68.819	ENSLOCG00000012529	pum3	99	67.341	Lepisosteus_oculatus
ENSLACG00000008312	PUM3	97	67.244	ENSLAFG00000017341	PUM3	99	66.616	Loxodonta_africana
ENSLACG00000008312	PUM3	99	67.388	ENSMFAG00000001430	PUM3	99	67.388	Macaca_fascicularis
ENSLACG00000008312	PUM3	99	67.388	ENSMMUG00000002362	PUM3	98	67.388	Macaca_mulatta
ENSLACG00000008312	PUM3	99	67.388	ENSMNEG00000035288	PUM3	99	67.388	Macaca_nemestrina
ENSLACG00000008312	PUM3	99	67.079	ENSMLEG00000034820	PUM3	99	67.079	Mandrillus_leucophaeus
ENSLACG00000008312	PUM3	99	53.834	ENSMAMG00000022861	pum3	99	55.030	Mastacembelus_armatus
ENSLACG00000008312	PUM3	99	53.343	ENSMZEG00005014205	pum3	97	53.272	Maylandia_zebra
ENSLACG00000008312	PUM3	96	63.057	ENSMGAG00000002255	PUM3	99	63.158	Meleagris_gallopavo
ENSLACG00000008312	PUM3	99	66.718	ENSMAUG00000009733	Pum3	99	65.644	Mesocricetus_auratus
ENSLACG00000008312	PUM3	100	66.616	ENSMICG00000045916	PUM3	87	66.616	Microcebus_murinus
ENSLACG00000008312	PUM3	100	66.412	ENSMOCG00000019519	-	100	66.412	Microtus_ochrogaster
ENSLACG00000008312	PUM3	100	63.400	ENSMOCG00000014830	-	100	62.443	Microtus_ochrogaster
ENSLACG00000008312	PUM3	96	50.318	ENSMMOG00000012184	pum3	92	52.265	Mola_mola
ENSLACG00000008312	PUM3	90	68.081	ENSMODG00000015417	PUM3	82	68.081	Monodelphis_domestica
ENSLACG00000008312	PUM3	83	59.738	ENSMALG00000022164	pum3	92	54.341	Monopterus_albus
ENSLACG00000008312	PUM3	100	66.309	MGP_CAROLIEiJ_G0022845	Pum3	99	66.309	Mus_caroli
ENSLACG00000008312	PUM3	100	66.309	ENSMUSG00000041360	Pum3	99	66.309	Mus_musculus
ENSLACG00000008312	PUM3	99	66.514	MGP_PahariEiJ_G0014338	Pum3	99	66.514	Mus_pahari
ENSLACG00000008312	PUM3	100	66.309	MGP_SPRETEiJ_G0023763	Pum3	99	66.309	Mus_spretus
ENSLACG00000008312	PUM3	96	67.252	ENSMPUG00000005125	PUM3	100	66.156	Mustela_putorius_furo
ENSLACG00000008312	PUM3	99	65.644	ENSMLUG00000002309	PUM3	99	65.644	Myotis_lucifugus
ENSLACG00000008312	PUM3	100	64.992	ENSNGAG00000019468	Pum3	100	64.590	Nannospalax_galili
ENSLACG00000008312	PUM3	97	51.014	ENSNBRG00000021370	pum3	94	53.177	Neolamprologus_brichardi
ENSLACG00000008312	PUM3	99	66.924	ENSNLEG00000008712	PUM3	99	66.924	Nomascus_leucogenys
ENSLACG00000008312	PUM3	64	75.439	ENSMEUG00000013606	-	83	76.132	Notamacropus_eugenii
ENSLACG00000008312	PUM3	70	57.734	ENSOPRG00000004225	-	72	57.263	Ochotona_princeps
ENSLACG00000008312	PUM3	100	65.297	ENSODEG00000003625	-	99	64.536	Octodon_degus
ENSLACG00000008312	PUM3	100	60.823	ENSODEG00000016477	-	100	59.697	Octodon_degus
ENSLACG00000008312	PUM3	99	53.681	ENSONIG00000012733	pum3	99	52.977	Oreochromis_niloticus
ENSLACG00000008312	PUM3	82	70.000	ENSOANG00000014995	PUM3	100	70.674	Ornithorhynchus_anatinus
ENSLACG00000008312	PUM3	99	66.151	ENSOCUG00000026104	-	99	66.151	Oryctolagus_cuniculus
ENSLACG00000008312	PUM3	100	65.697	ENSOCUG00000004189	-	100	65.697	Oryctolagus_cuniculus
ENSLACG00000008312	PUM3	98	52.800	ENSORLG00000014935	pum3	93	52.800	Oryzias_latipes
ENSLACG00000008312	PUM3	98	52.960	ENSORLG00020002841	pum3	93	52.960	Oryzias_latipes_hni
ENSLACG00000008312	PUM3	99	52.489	ENSORLG00015015906	pum3	93	55.243	Oryzias_latipes_hsok
ENSLACG00000008312	PUM3	94	53.731	ENSOMEG00000009427	pum3	89	55.304	Oryzias_melastigma
ENSLACG00000008312	PUM3	100	66.769	ENSOGAG00000008125	-	100	66.769	Otolemur_garnettii
ENSLACG00000008312	PUM3	99	50.932	ENSOGAG00000033481	-	99	50.932	Otolemur_garnettii
ENSLACG00000008312	PUM3	97	67.241	ENSOARG00000013337	PUM3	100	66.870	Ovis_aries
ENSLACG00000008312	PUM3	99	66.104	ENSPPAG00000041337	PUM3	99	65.491	Pan_paniscus
ENSLACG00000008312	PUM3	100	66.156	ENSPPRG00000000809	PUM3	100	66.156	Panthera_pardus
ENSLACG00000008312	PUM3	100	66.156	ENSPTIG00000021934	PUM3	100	66.156	Panthera_tigris_altaica
ENSLACG00000008312	PUM3	99	66.258	ENSPTRG00000020735	PUM3	99	65.644	Pan_troglodytes
ENSLACG00000008312	PUM3	99	67.543	ENSPANG00000025118	PUM3	99	67.543	Papio_anubis
ENSLACG00000008312	PUM3	99	63.876	ENSPKIG00000022249	pum3	95	63.884	Paramormyrops_kingsleyae
ENSLACG00000008312	PUM3	100	69.735	ENSPSIG00000016272	PUM3	100	69.735	Pelodiscus_sinensis
ENSLACG00000008312	PUM3	76	57.026	ENSPMGG00000021261	pum3	98	57.026	Periophthalmus_magnuspinnatus
ENSLACG00000008312	PUM3	100	55.725	ENSPEMG00000019340	-	100	64.151	Peromyscus_maniculatus_bairdii
ENSLACG00000008312	PUM3	90	68.750	ENSPCIG00000030598	PUM3	77	68.750	Phascolarctos_cinereus
ENSLACG00000008312	PUM3	99	53.198	ENSPFOG00000001719	pum3	99	52.886	Poecilia_formosa
ENSLACG00000008312	PUM3	99	53.846	ENSPLAG00000020010	pum3	99	53.049	Poecilia_latipinna
ENSLACG00000008312	PUM3	99	54.083	ENSPMEG00000017451	pum3	99	52.896	Poecilia_mexicana
ENSLACG00000008312	PUM3	99	66.924	ENSPPYG00000019255	PUM3	99	66.924	Pongo_abelii
ENSLACG00000008312	PUM3	99	58.896	ENSPCAG00000005797	PUM3	94	58.282	Procavia_capensis
ENSLACG00000008312	PUM3	100	66.922	ENSPCOG00000027325	PUM3	100	66.922	Propithecus_coquereli
ENSLACG00000008312	PUM3	100	66.003	ENSPVAG00000016135	PUM3	95	66.003	Pteropus_vampyrus
ENSLACG00000008312	PUM3	99	52.402	ENSPNYG00000016124	pum3	99	51.780	Pundamilia_nyererei
ENSLACG00000008312	PUM3	99	63.142	ENSPNAG00000026524	pum3	100	62.519	Pygocentrus_nattereri
ENSLACG00000008312	PUM3	100	66.003	ENSRNOG00000012574	Pum3	100	66.003	Rattus_norvegicus
ENSLACG00000008312	PUM3	100	65.850	ENSRNOG00000048356	RGD1308750	100	65.850	Rattus_norvegicus
ENSLACG00000008312	PUM3	99	67.079	ENSRBIG00000036924	PUM3	99	66.924	Rhinopithecus_bieti
ENSLACG00000008312	PUM3	99	67.079	ENSRROG00000041089	PUM3	99	67.079	Rhinopithecus_roxellana
ENSLACG00000008312	PUM3	99	67.079	ENSSBOG00000028066	PUM3	99	67.079	Saimiri_boliviensis_boliviensis
ENSLACG00000008312	PUM3	99	68.924	ENSSHAG00000003730	PUM3	99	65.123	Sarcophilus_harrisii
ENSLACG00000008312	PUM3	99	63.876	ENSSFOG00015018778	pum3	99	63.344	Scleropages_formosus
ENSLACG00000008312	PUM3	83	60.640	ENSSMAG00000013236	pum3	99	55.251	Scophthalmus_maximus
ENSLACG00000008312	PUM3	93	57.305	ENSSDUG00000001887	pum3	99	55.723	Seriola_dumerili
ENSLACG00000008312	PUM3	99	55.060	ENSSLDG00000015766	pum3	99	55.758	Seriola_lalandi_dorsalis
ENSLACG00000008312	PUM3	95	64.412	ENSSARG00000000579	PUM3	95	66.156	Sorex_araneus
ENSLACG00000008312	PUM3	96	69.593	ENSSPUG00000001707	PUM3	100	68.487	Sphenodon_punctatus
ENSLACG00000008312	PUM3	99	54.755	ENSSPAG00000003976	pum3	99	54.448	Stegastes_partitus
ENSLACG00000008312	PUM3	98	67.555	ENSSSCG00000005227	PUM3	99	67.381	Sus_scrofa
ENSLACG00000008312	PUM3	99	71.024	ENSTGUG00000005339	PUM3	99	71.024	Taeniopygia_guttata
ENSLACG00000008312	PUM3	98	54.644	ENSTRUG00000004074	pum3	86	57.443	Takifugu_rubripes
ENSLACG00000008312	PUM3	89	59.511	ENSTNIG00000010325	pum3	94	58.844	Tetraodon_nigroviridis
ENSLACG00000008312	PUM3	87	54.480	ENSTBEG00000013058	PUM3	86	54.480	Tupaia_belangeri
ENSLACG00000008312	PUM3	98	60.440	ENSTTRG00000001062	PUM3	96	60.337	Tursiops_truncatus
ENSLACG00000008312	PUM3	97	61.769	ENSUMAG00000018443	PUM3	99	65.348	Ursus_maritimus
ENSLACG00000008312	PUM3	100	67.125	ENSVPAG00000010766	PUM3	99	67.125	Vicugna_pacos
ENSLACG00000008312	PUM3	96	68.262	ENSVVUG00000006527	PUM3	99	67.228	Vulpes_vulpes
ENSLACG00000008312	PUM3	97	57.416	ENSXETG00000011707	pum3	96	56.619	Xenopus_tropicalis
ENSLACG00000008312	PUM3	93	53.859	ENSXCOG00000006725	pum3	96	54.685	Xiphophorus_couchianus
ENSLACG00000008312	PUM3	99	52.696	ENSXMAG00000002926	pum3	99	52.446	Xiphophorus_maculatus