EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008355 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3802 bases
Position: chrJH127831.1:337633-341434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009473	RVT_1	PF00078.27	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009545	-	1881	-	ENSLACP00000009473	627 (aa)	-	H3AIK2

Gene Model

Click here to download ENSLACG00000008355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008355	-	59	35.476	ENSLACG00000010776	-	61	35.476
ENSLACG00000008355	-	61	38.407	ENSLACG00000002169	-	68	38.407
ENSLACG00000008355	-	95	30.804	ENSLACG00000001186	-	84	30.804
ENSLACG00000008355	-	99	32.201	ENSLACG00000009168	-	78	32.201
ENSLACG00000008355	-	63	35.520	ENSLACG00000007131	-	56	35.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008355	-	50	30.919	ENSCPBG00000001119	-	78	32.065	Chrysemys_picta_bellii
ENSLACG00000008355	-	81	38.936	ENSCSEG00000010442	-	57	38.936	Cynoglossus_semilaevis
ENSLACG00000008355	-	64	52.212	ENSCVAG00000019870	-	61	52.212	Cyprinodon_variegatus
ENSLACG00000008355	-	54	38.601	ENSGAGG00000011063	-	79	38.601	Gopherus_agassizii
ENSLACG00000008355	-	64	40.789	ENSGAGG00000022002	-	55	40.789	Gopherus_agassizii
ENSLACG00000008355	-	64	40.570	ENSGAGG00000007173	-	72	40.570	Gopherus_agassizii
ENSLACG00000008355	-	60	38.353	ENSHCOG00000019997	-	76	38.353	Hippocampus_comes
ENSLACG00000008355	-	62	39.773	ENSIPUG00000003645	-	90	39.773	Ictalurus_punctatus
ENSLACG00000008355	-	64	37.168	ENSMAMG00000019918	-	75	37.168	Mastacembelus_armatus
ENSLACG00000008355	-	65	41.957	ENSOMEG00000005634	-	63	41.957	Oryzias_melastigma
ENSLACG00000008355	-	74	39.461	ENSPKIG00000015048	-	75	39.461	Paramormyrops_kingsleyae
ENSLACG00000008355	-	60	37.793	ENSPKIG00000005406	-	71	37.793	Paramormyrops_kingsleyae
ENSLACG00000008355	-	64	39.246	ENSPKIG00000013778	-	61	39.246	Paramormyrops_kingsleyae
ENSLACG00000008355	-	50	30.337	ENSPMEG00000018862	-	71	30.337	Poecilia_mexicana
ENSLACG00000008355	-	52	40.214	ENSPMEG00000017235	-	61	40.214	Poecilia_mexicana
ENSLACG00000008355	-	53	40.741	ENSPNAG00000009058	-	76	40.741	Pygocentrus_nattereri
ENSLACG00000008355	-	58	39.078	ENSPNAG00000010299	-	82	39.078	Pygocentrus_nattereri
ENSLACG00000008355	-	56	37.659	ENSTRUG00000024803	-	76	37.659	Takifugu_rubripes