EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008367 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1515 bases
Position: chrJH128174.1:338693-340207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009486	MMR_HSR1	PF01926.23	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009558	-	1419	-	ENSLACP00000009486	473 (aa)	-	H3AIL5

Gene Model

Click here to download ENSLACG00000008367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008367	-	88	65.044	ENSLACG00000002181	-	97	65.044
ENSLACG00000008367	-	96	50.000	ENSLACG00000002495	-	96	48.984
ENSLACG00000008367	-	99	43.713	ENSLACG00000002326	zgc:171695	99	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008367	-	99	47.266	ENSAPOG00000015784	-	84	46.680	Acanthochromis_polyacanthus
ENSLACG00000008367	-	95	47.677	ENSAPOG00000015792	-	87	47.071	Acanthochromis_polyacanthus
ENSLACG00000008367	-	96	47.200	ENSACIG00000022228	-	84	46.600	Amphilophus_citrinellus
ENSLACG00000008367	-	99	46.318	ENSACIG00000009923	-	83	46.318	Amphilophus_citrinellus
ENSLACG00000008367	-	99	45.703	ENSAPEG00000005793	-	95	45.703	Amphiprion_percula
ENSLACG00000008367	-	96	48.491	ENSATEG00000009097	-	84	47.686	Anabas_testudineus
ENSLACG00000008367	-	99	48.155	ENSACLG00000023474	-	92	48.155	Astatotilapia_calliptera
ENSLACG00000008367	-	96	48.297	ENSACLG00000023481	-	90	47.896	Astatotilapia_calliptera
ENSLACG00000008367	-	99	42.383	ENSCVAG00000018327	-	86	42.353	Cyprinodon_variegatus
ENSLACG00000008367	-	96	49.598	ENSFHEG00000021969	-	90	49.598	Fundulus_heteroclitus
ENSLACG00000008367	-	99	43.053	ENSFHEG00000011074	-	79	43.053	Fundulus_heteroclitus
ENSLACG00000008367	-	92	44.864	ENSFHEG00000008149	-	78	42.857	Fundulus_heteroclitus
ENSLACG00000008367	-	96	48.902	ENSHBUG00000021307	-	89	48.902	Haplochromis_burtoni
ENSLACG00000008367	-	99	47.025	ENSHBUG00000012995	-	92	47.025	Haplochromis_burtoni
ENSLACG00000008367	-	93	45.929	ENSKMAG00000016981	-	77	45.720	Kryptolebias_marmoratus
ENSLACG00000008367	-	98	48.713	ENSKMAG00000016903	-	67	48.317	Kryptolebias_marmoratus
ENSLACG00000008367	-	99	48.054	ENSMAMG00000015097	-	92	47.276	Mastacembelus_armatus
ENSLACG00000008367	-	99	48.544	ENSMAMG00000015247	-	92	47.961	Mastacembelus_armatus
ENSLACG00000008367	-	99	46.990	ENSMAMG00000015216	-	92	46.408	Mastacembelus_armatus
ENSLACG00000008367	-	99	47.692	ENSMZEG00005020281	-	86	47.308	Maylandia_zebra
ENSLACG00000008367	-	99	48.155	ENSMZEG00005020274	-	92	48.155	Maylandia_zebra
ENSLACG00000008367	-	97	45.597	ENSNBRG00000016799	-	89	45.597	Neolamprologus_brichardi
ENSLACG00000008367	-	97	47.535	ENSNBRG00000022932	-	90	47.140	Neolamprologus_brichardi
ENSLACG00000008367	-	92	49.275	ENSNBRG00000016760	-	95	49.275	Neolamprologus_brichardi
ENSLACG00000008367	-	91	48.326	ENSONIG00000012363	-	97	48.326	Oreochromis_niloticus
ENSLACG00000008367	-	94	50.713	ENSPKIG00000011996	-	85	50.916	Paramormyrops_kingsleyae
ENSLACG00000008367	-	96	51.389	ENSPKIG00000009271	-	83	50.992	Paramormyrops_kingsleyae
ENSLACG00000008367	-	90	38.837	ENSPMGG00000000605	-	73	53.600	Periophthalmus_magnuspinnatus
ENSLACG00000008367	-	96	47.904	ENSPFOG00000010758	-	78	47.904	Poecilia_formosa
ENSLACG00000008367	-	96	47.421	ENSPLAG00000010093	-	66	47.421	Poecilia_latipinna
ENSLACG00000008367	-	97	41.551	ENSPLAG00000005002	-	97	41.916	Poecilia_latipinna
ENSLACG00000008367	-	99	44.094	ENSPLAG00000000406	-	94	43.504	Poecilia_latipinna
ENSLACG00000008367	-	99	44.094	ENSPMEG00000014712	-	78	43.504	Poecilia_mexicana
ENSLACG00000008367	-	95	47.251	ENSPREG00000021204	-	91	47.047	Poecilia_reticulata
ENSLACG00000008367	-	99	46.289	ENSSMAG00000004663	-	83	46.094	Scophthalmus_maximus
ENSLACG00000008367	-	99	47.563	ENSSDUG00000004257	-	93	47.368	Seriola_dumerili
ENSLACG00000008367	-	99	46.979	ENSSLDG00000021625	-	91	46.979	Seriola_lalandi_dorsalis
ENSLACG00000008367	-	99	45.665	ENSSPAG00000003320	-	87	45.665	Stegastes_partitus
ENSLACG00000008367	-	99	44.094	ENSXMAG00000022709	-	78	43.504	Xiphophorus_maculatus
ENSLACG00000008367	-	97	44.200	ENSXMAG00000023457	-	96	43.600	Xiphophorus_maculatus