EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 3823 bases
Position: chrJH128110.1:353086-356908
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009713	PARP	PF00644.20	2.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009788	-	927	-	ENSLACP00000009713	308 (aa)	-	H3AJ92

Gene Model

Click here to download ENSLACG00000008565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008565	-	63	72.680	ENSLACG00000009107	-	97	72.680
ENSLACG00000008565	-	99	39.450	ENSLACG00000001018	-	53	39.450
ENSLACG00000008565	-	63	33.953	ENSLACG00000016902	PARP11	63	33.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008565	-	69	31.140	ENSCING00000015928	-	87	31.140	Ciona_intestinalis
ENSLACG00000008565	-	73	33.040	ENSCING00000013562	-	54	33.040	Ciona_intestinalis
ENSLACG00000008565	-	73	32.900	ENSCSAVG00000007096	-	59	32.900	Ciona_savignyi
ENSLACG00000008565	-	63	35.644	ENSCSAVG00000007134	-	53	35.644	Ciona_savignyi
ENSLACG00000008565	-	63	40.206	ENSCSAVG00000008867	-	51	40.206	Ciona_savignyi