EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008581 (Gene tree)
Gene ID: 102354733
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 16037 bases
Position: chrJH128413.1:354277-370313
Accession: 102354733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009732	UPF0086	PF01868.16	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009807	POP4-201	2668	XM_006008683	ENSLACP00000009732	222 (aa)	XP_006008745	H3AJB1

Gene Model

Click here to download ENSLACG00000008581's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008581	POP4	98	64.055	ENSG00000105171	POP4	100	72.917	Homo_sapiens
ENSLACG00000008581	POP4	94	58.768	ENSAMEG00000003172	-	95	58.768	Ailuropoda_melanoleuca
ENSLACG00000008581	POP4	98	64.977	ENSAMEG00000018329	-	99	64.977	Ailuropoda_melanoleuca
ENSLACG00000008581	POP4	98	58.525	ENSACIG00000008358	pop4	99	58.525	Amphilophus_citrinellus
ENSLACG00000008581	POP4	90	61.275	ENSAOCG00000010116	pop4	98	59.314	Amphiprion_ocellaris
ENSLACG00000008581	POP4	97	59.009	ENSAPEG00000002829	pop4	92	57.207	Amphiprion_percula
ENSLACG00000008581	POP4	98	54.338	ENSATEG00000013028	pop4	99	53.881	Anabas_testudineus
ENSLACG00000008581	POP4	91	68.812	ENSAPLG00000014051	POP4	98	68.812	Anas_platyrhynchos
ENSLACG00000008581	POP4	97	65.278	ENSANAG00000020295	POP4	98	65.278	Aotus_nancymaae
ENSLACG00000008581	POP4	100	56.696	ENSACLG00000000526	pop4	98	57.991	Astatotilapia_calliptera
ENSLACG00000008581	POP4	99	57.273	ENSAMXG00000002899	pop4	100	57.273	Astyanax_mexicanus
ENSLACG00000008581	POP4	99	65.909	ENSBTAG00000002223	POP4	100	65.909	Bos_taurus
ENSLACG00000008581	POP4	97	65.899	ENSCJAG00000046750	POP4	97	70.690	Callithrix_jacchus
ENSLACG00000008581	POP4	82	67.033	ENSCAFG00000007630	POP4	100	67.033	Canis_familiaris
ENSLACG00000008581	POP4	99	65.000	ENSCHIG00000016743	POP4	100	65.000	Capra_hircus
ENSLACG00000008581	POP4	98	65.438	ENSTSYG00000003488	POP4	99	65.438	Carlito_syrichta
ENSLACG00000008581	POP4	98	44.240	ENSCAPG00000011105	POP4	100	44.240	Cavia_aperea
ENSLACG00000008581	POP4	98	62.212	ENSCPOG00000002992	POP4	99	62.212	Cavia_porcellus
ENSLACG00000008581	POP4	97	64.352	ENSCCAG00000020285	-	98	64.352	Cebus_capucinus
ENSLACG00000008581	POP4	97	56.019	ENSCCAG00000034244	-	98	56.019	Cebus_capucinus
ENSLACG00000008581	POP4	98	65.438	ENSCATG00000036022	POP4	100	75.000	Cercocebus_atys
ENSLACG00000008581	POP4	99	62.727	ENSCLAG00000013162	POP4	100	62.727	Chinchilla_lanigera
ENSLACG00000008581	POP4	98	64.977	ENSCSAG00000004868	POP4	99	64.977	Chlorocebus_sabaeus
ENSLACG00000008581	POP4	98	47.465	ENSCHOG00000002071	POP4	100	47.465	Choloepus_hoffmanni
ENSLACG00000008581	POP4	99	70.455	ENSCPBG00000016132	POP4	100	70.455	Chrysemys_picta_bellii
ENSLACG00000008581	POP4	55	36.585	ENSCING00000023871	-	62	36.585	Ciona_intestinalis
ENSLACG00000008581	POP4	91	65.842	ENSCANG00000005924	POP4	100	65.842	Colobus_angolensis_palliatus
ENSLACG00000008581	POP4	98	63.134	ENSCGRG00001017185	Pop4	99	62.673	Cricetulus_griseus_chok1gshd
ENSLACG00000008581	POP4	98	63.134	ENSCGRG00000008155	Pop4	99	62.673	Cricetulus_griseus_crigri
ENSLACG00000008581	POP4	96	51.628	ENSCSEG00000002946	pop4	97	51.628	Cynoglossus_semilaevis
ENSLACG00000008581	POP4	97	44.495	ENSCVAG00000018602	POP4	94	44.495	Cyprinodon_variegatus
ENSLACG00000008581	POP4	98	57.143	ENSDARG00000101472	pop4	99	56.682	Danio_rerio
ENSLACG00000008581	POP4	98	66.359	ENSDNOG00000047663	POP4	89	65.158	Dasypus_novemcinctus
ENSLACG00000008581	POP4	77	59.302	ENSDORG00000008577	Pop4	100	59.302	Dipodomys_ordii
ENSLACG00000008581	POP4	67	35.484	FBgn0035831	CG8038	71	36.301	Drosophila_melanogaster
ENSLACG00000008581	POP4	98	54.839	ENSETEG00000003607	POP4	100	54.839	Echinops_telfairi
ENSLACG00000008581	POP4	89	41.905	ENSEBUG00000004305	pop4	91	40.952	Eptatretus_burgeri
ENSLACG00000008581	POP4	99	41.176	ENSEBUG00000008575	pop4	100	40.724	Eptatretus_burgeri
ENSLACG00000008581	POP4	89	47.143	ENSEBUG00000010447	pop4	82	45.714	Eptatretus_burgeri
ENSLACG00000008581	POP4	98	69.231	ENSECAG00000020206	POP4	82	69.231	Equus_caballus
ENSLACG00000008581	POP4	89	48.223	ENSEEUG00000013109	POP4	99	48.223	Erinaceus_europaeus
ENSLACG00000008581	POP4	96	60.280	ENSELUG00000019812	pop4	97	61.215	Esox_lucius
ENSLACG00000008581	POP4	98	64.516	ENSFCAG00000001619	POP4	100	63.636	Felis_catus
ENSLACG00000008581	POP4	99	64.545	ENSFALG00000000206	POP4	98	64.545	Ficedula_albicollis
ENSLACG00000008581	POP4	99	63.636	ENSFDAG00000017859	POP4	100	63.636	Fukomys_damarensis
ENSLACG00000008581	POP4	89	53.266	ENSFHEG00000012745	pop4	90	52.764	Fundulus_heteroclitus
ENSLACG00000008581	POP4	89	57.789	ENSGMOG00000000335	pop4	98	57.789	Gadus_morhua
ENSLACG00000008581	POP4	98	68.203	ENSGALG00000041972	POP4	91	68.203	Gallus_gallus
ENSLACG00000008581	POP4	77	47.126	ENSGAFG00000003571	pop4	96	46.552	Gambusia_affinis
ENSLACG00000008581	POP4	95	56.075	ENSGACG00000014510	pop4	96	56.075	Gasterosteus_aculeatus
ENSLACG00000008581	POP4	98	69.585	ENSGAGG00000024544	POP4	78	69.585	Gopherus_agassizii
ENSLACG00000008581	POP4	98	64.516	ENSGGOG00000038346	POP4	99	64.516	Gorilla_gorilla
ENSLACG00000008581	POP4	98	57.078	ENSHBUG00000021821	pop4	96	57.944	Haplochromis_burtoni
ENSLACG00000008581	POP4	98	62.673	ENSHGLG00000015798	POP4	99	62.673	Heterocephalus_glaber_female
ENSLACG00000008581	POP4	98	62.673	ENSHGLG00100009737	POP4	99	62.673	Heterocephalus_glaber_male
ENSLACG00000008581	POP4	98	55.455	ENSHCOG00000020937	pop4	98	55.455	Hippocampus_comes
ENSLACG00000008581	POP4	99	55.909	ENSIPUG00000013652	pop4	100	55.909	Ictalurus_punctatus
ENSLACG00000008581	POP4	98	65.438	ENSSTOG00000011016	POP4	99	65.438	Ictidomys_tridecemlineatus
ENSLACG00000008581	POP4	98	63.134	ENSJJAG00000013376	Pop4	99	63.134	Jaculus_jaculus
ENSLACG00000008581	POP4	97	56.881	ENSKMAG00000012250	pop4	98	55.963	Kryptolebias_marmoratus
ENSLACG00000008581	POP4	98	49.772	ENSLBEG00000018846	-	98	50.228	Labrus_bergylta
ENSLACG00000008581	POP4	98	49.772	ENSLBEG00000014139	pop4	98	50.228	Labrus_bergylta
ENSLACG00000008581	POP4	99	68.636	ENSLOCG00000005597	pop4	100	68.636	Lepisosteus_oculatus
ENSLACG00000008581	POP4	98	66.359	ENSLAFG00000000084	POP4	99	66.359	Loxodonta_africana
ENSLACG00000008581	POP4	98	64.977	ENSMFAG00000029606	POP4	100	64.091	Macaca_fascicularis
ENSLACG00000008581	POP4	98	64.679	ENSMMUG00000017424	POP4	100	63.801	Macaca_mulatta
ENSLACG00000008581	POP4	98	64.679	ENSMNEG00000031374	POP4	100	63.801	Macaca_nemestrina
ENSLACG00000008581	POP4	98	64.516	ENSMLEG00000043454	POP4	100	63.636	Mandrillus_leucophaeus
ENSLACG00000008581	POP4	98	57.078	ENSMAMG00000011716	pop4	98	56.164	Mastacembelus_armatus
ENSLACG00000008581	POP4	98	57.991	ENSMZEG00005002360	pop4	98	57.991	Maylandia_zebra
ENSLACG00000008581	POP4	99	68.493	ENSMGAG00000005337	POP4	98	68.493	Meleagris_gallopavo
ENSLACG00000008581	POP4	98	63.594	ENSMAUG00000020110	Pop4	99	63.594	Mesocricetus_auratus
ENSLACG00000008581	POP4	98	63.594	ENSMICG00000035730	POP4	97	63.594	Microcebus_murinus
ENSLACG00000008581	POP4	98	55.760	ENSMMOG00000015321	pop4	98	54.839	Mola_mola
ENSLACG00000008581	POP4	97	67.130	ENSMODG00000029406	POP4	94	67.130	Monodelphis_domestica
ENSLACG00000008581	POP4	98	57.143	ENSMALG00000012571	pop4	98	57.143	Monopterus_albus
ENSLACG00000008581	POP4	98	63.303	MGP_CAROLIEiJ_G0029600	Pop4	99	63.303	Mus_caroli
ENSLACG00000008581	POP4	98	63.303	ENSMUSG00000030423	Pop4	99	63.303	Mus_musculus
ENSLACG00000008581	POP4	98	63.134	MGP_SPRETEiJ_G0030699	Pop4	99	62.673	Mus_spretus
ENSLACG00000008581	POP4	98	64.977	ENSMPUG00000008041	-	100	64.091	Mustela_putorius_furo
ENSLACG00000008581	POP4	98	57.798	ENSMPUG00000008063	-	99	57.798	Mustela_putorius_furo
ENSLACG00000008581	POP4	98	53.211	ENSMLUG00000010774	POP4	99	53.211	Myotis_lucifugus
ENSLACG00000008581	POP4	56	71.200	ENSMEUG00000003636	-	100	71.200	Notamacropus_eugenii
ENSLACG00000008581	POP4	89	67.172	ENSOPRG00000004736	POP4	99	67.172	Ochotona_princeps
ENSLACG00000008581	POP4	98	62.212	ENSODEG00000013025	POP4	99	63.636	Octodon_degus
ENSLACG00000008581	POP4	100	56.250	ENSONIG00000003458	pop4	99	56.250	Oreochromis_niloticus
ENSLACG00000008581	POP4	98	64.516	ENSOCUG00000015974	POP4	100	63.636	Oryctolagus_cuniculus
ENSLACG00000008581	POP4	98	56.164	ENSORLG00000020317	pop4	98	55.251	Oryzias_latipes
ENSLACG00000008581	POP4	98	55.708	ENSORLG00015011624	pop4	98	54.795	Oryzias_latipes_hsok
ENSLACG00000008581	POP4	98	56.164	ENSOMEG00000002538	pop4	98	55.251	Oryzias_melastigma
ENSLACG00000008581	POP4	99	61.644	ENSOGAG00000011168	POP4	99	61.644	Otolemur_garnettii
ENSLACG00000008581	POP4	99	64.706	ENSOARG00000004041	POP4	100	64.706	Ovis_aries
ENSLACG00000008581	POP4	98	64.516	ENSPPAG00000040372	POP4	99	64.516	Pan_paniscus
ENSLACG00000008581	POP4	98	64.516	ENSPPRG00000010502	POP4	100	63.636	Panthera_pardus
ENSLACG00000008581	POP4	98	64.516	ENSPTIG00000016598	POP4	100	63.636	Panthera_tigris_altaica
ENSLACG00000008581	POP4	98	64.516	ENSPTRG00000010779	POP4	99	64.516	Pan_troglodytes
ENSLACG00000008581	POP4	98	64.977	ENSPANG00000008546	POP4	100	64.091	Papio_anubis
ENSLACG00000008581	POP4	90	63.184	ENSPKIG00000004468	pop4	88	63.184	Paramormyrops_kingsleyae
ENSLACG00000008581	POP4	99	71.818	ENSPSIG00000015690	POP4	100	72.277	Pelodiscus_sinensis
ENSLACG00000008581	POP4	90	54.634	ENSPMGG00000008608	pop4	98	54.634	Periophthalmus_magnuspinnatus
ENSLACG00000008581	POP4	98	52.535	ENSPEMG00000019982	-	99	52.535	Peromyscus_maniculatus_bairdii
ENSLACG00000008581	POP4	99	62.896	ENSPEMG00000014034	-	97	62.896	Peromyscus_maniculatus_bairdii
ENSLACG00000008581	POP4	82	53.535	ENSPMAG00000006265	pop4	100	52.525	Petromyzon_marinus
ENSLACG00000008581	POP4	98	67.742	ENSPCIG00000024738	POP4	94	67.742	Phascolarctos_cinereus
ENSLACG00000008581	POP4	97	52.074	ENSPFOG00000000925	pop4	98	52.074	Poecilia_formosa
ENSLACG00000008581	POP4	97	52.074	ENSPLAG00000003161	pop4	98	52.074	Poecilia_latipinna
ENSLACG00000008581	POP4	97	52.074	ENSPMEG00000002475	pop4	98	52.074	Poecilia_mexicana
ENSLACG00000008581	POP4	97	52.995	ENSPREG00000022403	pop4	92	52.995	Poecilia_reticulata
ENSLACG00000008581	POP4	98	64.977	ENSPPYG00000009805	POP4	99	64.977	Pongo_abelii
ENSLACG00000008581	POP4	98	61.751	ENSPCAG00000007737	POP4	99	61.751	Procavia_capensis
ENSLACG00000008581	POP4	98	64.516	ENSPCOG00000018055	POP4	100	63.636	Propithecus_coquereli
ENSLACG00000008581	POP4	98	63.594	ENSPVAG00000006069	POP4	100	62.727	Pteropus_vampyrus
ENSLACG00000008581	POP4	98	57.534	ENSPNYG00000020038	pop4	98	57.534	Pundamilia_nyererei
ENSLACG00000008581	POP4	98	57.604	ENSPNAG00000005591	pop4	99	57.604	Pygocentrus_nattereri
ENSLACG00000008581	POP4	98	62.844	ENSRNOG00000027646	Pop4	99	62.844	Rattus_norvegicus
ENSLACG00000008581	POP4	79	61.364	ENSRBIG00000044769	POP4	90	64.286	Rhinopithecus_bieti
ENSLACG00000008581	POP4	98	65.438	ENSRROG00000028903	POP4	100	64.545	Rhinopithecus_roxellana
ENSLACG00000008581	POP4	64	31.818	YBR257W	-	54	31.818	Saccharomyces_cerevisiae
ENSLACG00000008581	POP4	97	64.815	ENSSBOG00000032445	POP4	98	64.815	Saimiri_boliviensis_boliviensis
ENSLACG00000008581	POP4	98	67.281	ENSSHAG00000016888	POP4	99	67.281	Sarcophilus_harrisii
ENSLACG00000008581	POP4	98	62.673	ENSSFOG00015014556	pop4	97	61.290	Scleropages_formosus
ENSLACG00000008581	POP4	97	56.881	ENSSMAG00000016611	pop4	98	55.963	Scophthalmus_maximus
ENSLACG00000008581	POP4	100	54.464	ENSSDUG00000019865	pop4	90	54.018	Seriola_dumerili
ENSLACG00000008581	POP4	100	54.018	ENSSLDG00000001763	pop4	100	53.571	Seriola_lalandi_dorsalis
ENSLACG00000008581	POP4	98	66.359	ENSSARG00000004748	POP4	100	66.359	Sorex_araneus
ENSLACG00000008581	POP4	100	56.696	ENSSPAG00000014364	pop4	100	55.357	Stegastes_partitus
ENSLACG00000008581	POP4	98	65.438	ENSSSCG00000002854	POP4	100	64.545	Sus_scrofa
ENSLACG00000008581	POP4	90	68.500	ENSTGUG00000008953	POP4	100	68.500	Taeniopygia_guttata
ENSLACG00000008581	POP4	91	57.635	ENSTNIG00000006401	pop4	100	57.635	Tetraodon_nigroviridis
ENSLACG00000008581	POP4	98	64.220	ENSTBEG00000002194	POP4	99	65.138	Tupaia_belangeri
ENSLACG00000008581	POP4	99	64.545	ENSTTRG00000005882	POP4	100	64.545	Tursiops_truncatus
ENSLACG00000008581	POP4	98	65.899	ENSUAMG00000003049	-	100	65.000	Ursus_americanus
ENSLACG00000008581	POP4	98	65.899	ENSUMAG00000007522	-	100	65.000	Ursus_maritimus
ENSLACG00000008581	POP4	93	65.385	ENSVVUG00000016876	-	73	65.385	Vulpes_vulpes
ENSLACG00000008581	POP4	98	64.679	ENSXETG00000017598	pop4	99	63.303	Xenopus_tropicalis
ENSLACG00000008581	POP4	97	52.055	ENSXCOG00000017695	pop4	92	51.598	Xiphophorus_couchianus
ENSLACG00000008581	POP4	97	52.055	ENSXMAG00000013862	pop4	92	51.598	Xiphophorus_maculatus