EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000008723 (Gene tree)
Gene ID: 102350804
Gene Symbol: PUM2
Alias: KIAA0235|PUMH2
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 142624 bases
Position: chrJH127230.1:366046-508669
Accession: 102350804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	1	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	2	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	3	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	4	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	5	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	6	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	7	8
ENSLACP00000009896	PUF	PF00806.19	8.6e-74	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000009972	PUM2-201	6809	XM_006001092	ENSLACP00000009896	1203 (aa)	XP_006001154	H3AJS5

Gene Model

Click here to download ENSLACG00000008723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000008723	PUM2	93	75.950	ENSLACG00000017188	PUM1	95	74.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008723	PUM2	89	90.476	ENSG00000055917	PUM2	100	91.176	Homo_sapiens
ENSLACG00000008723	PUM2	89	90.587	ENSAMEG00000002823	PUM2	100	89.469	Ailuropoda_melanoleuca
ENSLACG00000008723	PUM2	91	86.694	ENSACIG00000010646	pum2	95	89.979	Amphilophus_citrinellus
ENSLACG00000008723	PUM2	99	71.953	ENSAOCG00000016619	pum2	98	73.274	Amphiprion_ocellaris
ENSLACG00000008723	PUM2	100	73.426	ENSAPEG00000019924	pum2	100	74.632	Amphiprion_percula
ENSLACG00000008723	PUM2	100	74.223	ENSATEG00000015030	pum2	100	74.836	Anabas_testudineus
ENSLACG00000008723	PUM2	100	87.126	ENSAPLG00000010496	PUM2	100	87.209	Anas_platyrhynchos
ENSLACG00000008723	PUM2	89	90.178	ENSACAG00000010491	PUM2	100	89.242	Anolis_carolinensis
ENSLACG00000008723	PUM2	89	90.756	ENSANAG00000021807	PUM2	100	89.636	Aotus_nancymaae
ENSLACG00000008723	PUM2	100	72.757	ENSACLG00000022532	pum2	100	73.430	Astatotilapia_calliptera
ENSLACG00000008723	PUM2	89	90.392	ENSBTAG00000011155	PUM2	100	92.535	Bos_taurus
ENSLACG00000008723	PUM2	89	90.570	ENSCJAG00000007450	PUM2	100	89.449	Callithrix_jacchus
ENSLACG00000008723	PUM2	89	90.765	ENSCAFG00000003839	PUM2	100	89.646	Canis_familiaris
ENSLACG00000008723	PUM2	89	89.888	ENSCAFG00020025689	PUM2	100	88.619	Canis_lupus_dingo
ENSLACG00000008723	PUM2	89	90.392	ENSCHIG00000022180	PUM2	100	89.272	Capra_hircus
ENSLACG00000008723	PUM2	89	90.289	ENSTSYG00000014463	PUM2	100	89.542	Carlito_syrichta
ENSLACG00000008723	PUM2	85	85.057	ENSCAPG00000016888	PUM2	96	96.842	Cavia_aperea
ENSLACG00000008723	PUM2	89	89.851	ENSCPOG00000031996	PUM2	100	88.920	Cavia_porcellus
ENSLACG00000008723	PUM2	89	90.756	ENSCCAG00000037035	PUM2	100	89.636	Cebus_capucinus
ENSLACG00000008723	PUM2	89	90.850	ENSCATG00000043826	PUM2	100	89.729	Cercocebus_atys
ENSLACG00000008723	PUM2	89	90.765	ENSCLAG00000006048	PUM2	100	89.832	Chinchilla_lanigera
ENSLACG00000008723	PUM2	89	90.850	ENSCSAG00000008087	PUM2	100	89.729	Chlorocebus_sabaeus
ENSLACG00000008723	PUM2	63	89.655	ENSCHOG00000004575	PUM2	79	89.655	Choloepus_hoffmanni
ENSLACG00000008723	PUM2	89	90.850	ENSCANG00000032797	PUM2	100	89.729	Colobus_angolensis_palliatus
ENSLACG00000008723	PUM2	89	90.196	ENSCGRG00001025023	Pum2	100	89.076	Cricetulus_griseus_chok1gshd
ENSLACG00000008723	PUM2	89	90.383	ENSCGRG00000001580	Pum2	100	89.262	Cricetulus_griseus_crigri
ENSLACG00000008723	PUM2	100	73.633	ENSCSEG00000020899	pum2	100	73.792	Cynoglossus_semilaevis
ENSLACG00000008723	PUM2	100	73.077	ENSCVAG00000002426	pum2	100	75.023	Cyprinodon_variegatus
ENSLACG00000008723	PUM2	100	73.835	ENSDARG00000061040	pum2	100	72.313	Danio_rerio
ENSLACG00000008723	PUM2	89	88.301	ENSDNOG00000006733	PUM2	100	88.208	Dasypus_novemcinctus
ENSLACG00000008723	PUM2	89	85.475	ENSDORG00000011453	Pum2	100	84.358	Dipodomys_ordii
ENSLACG00000008723	PUM2	77	96.797	ENSETEG00000017683	PUM2	85	96.797	Echinops_telfairi
ENSLACG00000008723	PUM2	85	67.251	ENSEBUG00000004435	pum2	96	65.302	Eptatretus_burgeri
ENSLACG00000008723	PUM2	64	63.014	ENSEBUG00000014828	pum2	54	74.514	Eptatretus_burgeri
ENSLACG00000008723	PUM2	89	90.392	ENSEASG00005009429	PUM2	100	89.272	Equus_asinus_asinus
ENSLACG00000008723	PUM2	89	90.392	ENSECAG00000021930	PUM2	100	92.691	Equus_caballus
ENSLACG00000008723	PUM2	67	88.679	ENSEEUG00000003224	-	74	88.679	Erinaceus_europaeus
ENSLACG00000008723	PUM2	100	71.556	ENSELUG00000014997	pum2	100	72.883	Esox_lucius
ENSLACG00000008723	PUM2	89	90.485	ENSFCAG00000027520	PUM2	100	89.366	Felis_catus
ENSLACG00000008723	PUM2	89	90.841	ENSFALG00000001759	PUM2	100	90.654	Ficedula_albicollis
ENSLACG00000008723	PUM2	89	90.214	ENSFDAG00000019685	PUM2	100	89.189	Fukomys_damarensis
ENSLACG00000008723	PUM2	100	71.783	ENSFHEG00000021596	pum2	100	72.342	Fundulus_heteroclitus
ENSLACG00000008723	PUM2	89	73.077	ENSGMOG00000006903	pum2	100	73.144	Gadus_morhua
ENSLACG00000008723	PUM2	89	90.645	ENSGALG00000016481	PUM2	100	91.020	Gallus_gallus
ENSLACG00000008723	PUM2	100	72.386	ENSGAFG00000013691	pum2	100	84.632	Gambusia_affinis
ENSLACG00000008723	PUM2	89	74.539	ENSGACG00000009670	pum2	100	75.069	Gasterosteus_aculeatus
ENSLACG00000008723	PUM2	100	89.369	ENSGAGG00000020698	PUM2	100	90.467	Gopherus_agassizii
ENSLACG00000008723	PUM2	89	90.756	ENSGGOG00000011374	PUM2	100	89.823	Gorilla_gorilla
ENSLACG00000008723	PUM2	100	86.920	ENSHBUG00000016453	pum2	100	66.775	Haplochromis_burtoni
ENSLACG00000008723	PUM2	89	88.609	ENSHGLG00000007892	PUM2	100	87.582	Heterocephalus_glaber_female
ENSLACG00000008723	PUM2	89	88.340	ENSHGLG00100015510	PUM2	100	87.313	Heterocephalus_glaber_male
ENSLACG00000008723	PUM2	100	75.738	ENSHCOG00000010119	pum2	100	74.897	Hippocampus_comes
ENSLACG00000008723	PUM2	89	90.578	ENSSTOG00000006262	PUM2	100	89.739	Ictidomys_tridecemlineatus
ENSLACG00000008723	PUM2	89	90.121	ENSJJAG00000020969	Pum2	100	89.282	Jaculus_jaculus
ENSLACG00000008723	PUM2	100	72.571	ENSKMAG00000017216	pum2	100	73.659	Kryptolebias_marmoratus
ENSLACG00000008723	PUM2	100	73.361	ENSLBEG00000020488	pum2	100	74.487	Labrus_bergylta
ENSLACG00000008723	PUM2	100	87.479	ENSLOCG00000017196	pum2	100	86.899	Lepisosteus_oculatus
ENSLACG00000008723	PUM2	89	90.503	ENSLAFG00000009278	PUM2	100	89.665	Loxodonta_africana
ENSLACG00000008723	PUM2	89	90.756	ENSMFAG00000000492	PUM2	100	89.636	Macaca_fascicularis
ENSLACG00000008723	PUM2	89	90.756	ENSMMUG00000023181	PUM2	100	89.636	Macaca_mulatta
ENSLACG00000008723	PUM2	89	90.756	ENSMNEG00000039659	PUM2	100	89.636	Macaca_nemestrina
ENSLACG00000008723	PUM2	89	90.850	ENSMLEG00000039243	PUM2	100	89.729	Mandrillus_leucophaeus
ENSLACG00000008723	PUM2	100	74.159	ENSMAMG00000006121	pum2	100	74.795	Mastacembelus_armatus
ENSLACG00000008723	PUM2	100	72.595	ENSMZEG00005000791	pum2	100	73.269	Maylandia_zebra
ENSLACG00000008723	PUM2	89	90.645	ENSMGAG00000014040	PUM2	100	91.020	Meleagris_gallopavo
ENSLACG00000008723	PUM2	89	90.570	ENSMAUG00000000311	Pum2	100	89.449	Mesocricetus_auratus
ENSLACG00000008723	PUM2	89	91.036	ENSMICG00000011647	PUM2	100	90.103	Microcebus_murinus
ENSLACG00000008723	PUM2	89	90.103	ENSMOCG00000013663	Pum2	100	88.982	Microtus_ochrogaster
ENSLACG00000008723	PUM2	89	74.816	ENSMMOG00000002975	pum2	100	75.713	Mola_mola
ENSLACG00000008723	PUM2	89	87.094	ENSMODG00000009811	PUM2	100	86.630	Monodelphis_domestica
ENSLACG00000008723	PUM2	85	90.754	ENSMALG00000022313	pum2	100	83.369	Monopterus_albus
ENSLACG00000008723	PUM2	89	89.376	MGP_CAROLIEiJ_G0017603	Pum2	100	88.350	Mus_caroli
ENSLACG00000008723	PUM2	89	89.282	ENSMUSG00000020594	Pum2	100	88.444	Mus_musculus
ENSLACG00000008723	PUM2	89	90.205	MGP_PahariEiJ_G0029361	Pum2	100	89.179	Mus_pahari
ENSLACG00000008723	PUM2	89	89.376	MGP_SPRETEiJ_G0018447	Pum2	100	88.537	Mus_spretus
ENSLACG00000008723	PUM2	89	90.578	ENSMPUG00000013734	PUM2	100	89.459	Mustela_putorius_furo
ENSLACG00000008723	PUM2	89	89.944	ENSMLUG00000007362	PUM2	100	88.734	Myotis_lucifugus
ENSLACG00000008723	PUM2	89	61.075	ENSNGAG00000016239	-	99	69.985	Nannospalax_galili
ENSLACG00000008723	PUM2	89	90.103	ENSNGAG00000016665	-	100	89.169	Nannospalax_galili
ENSLACG00000008723	PUM2	81	66.899	ENSNBRG00000020737	pum2	100	65.646	Neolamprologus_brichardi
ENSLACG00000008723	PUM2	89	90.756	ENSNLEG00000002509	PUM2	100	89.636	Nomascus_leucogenys
ENSLACG00000008723	PUM2	83	84.167	ENSMEUG00000016567	PUM2	93	83.333	Notamacropus_eugenii
ENSLACG00000008723	PUM2	67	81.432	ENSOPRG00000001963	PUM2	92	81.432	Ochotona_princeps
ENSLACG00000008723	PUM2	89	89.366	ENSODEG00000007823	PUM2	100	88.899	Octodon_degus
ENSLACG00000008723	PUM2	100	73.551	ENSONIG00000006119	pum2	100	74.228	Oreochromis_niloticus
ENSLACG00000008723	PUM2	89	90.485	ENSOCUG00000017908	PUM2	100	89.552	Oryctolagus_cuniculus
ENSLACG00000008723	PUM2	100	72.563	ENSORLG00000012611	pum2	100	73.115	Oryzias_latipes
ENSLACG00000008723	PUM2	100	72.727	ENSORLG00020014452	pum2	100	73.197	Oryzias_latipes_hni
ENSLACG00000008723	PUM2	100	72.727	ENSORLG00015009427	pum2	100	73.197	Oryzias_latipes_hsok
ENSLACG00000008723	PUM2	84	84.435	ENSOMEG00000005889	pum2	100	83.582	Oryzias_melastigma
ENSLACG00000008723	PUM2	89	90.223	ENSOARG00000017236	PUM2	100	89.106	Ovis_aries
ENSLACG00000008723	PUM2	89	90.756	ENSPPAG00000023095	PUM2	100	89.823	Pan_paniscus
ENSLACG00000008723	PUM2	89	90.485	ENSPPRG00000021443	PUM2	100	89.366	Panthera_pardus
ENSLACG00000008723	PUM2	89	90.485	ENSPTIG00000018982	PUM2	100	89.366	Panthera_tigris_altaica
ENSLACG00000008723	PUM2	89	90.756	ENSPTRG00000011692	PUM2	100	89.823	Pan_troglodytes
ENSLACG00000008723	PUM2	89	80.000	ENSPANG00000009393	PUM2	100	95.775	Papio_anubis
ENSLACG00000008723	PUM2	100	89.203	ENSPSIG00000011626	PUM2	99	89.037	Pelodiscus_sinensis
ENSLACG00000008723	PUM2	89	89.823	ENSPEMG00000008357	Pum2	100	88.702	Peromyscus_maniculatus_bairdii
ENSLACG00000008723	PUM2	89	69.490	ENSPMAG00000007038	pum2	100	66.120	Petromyzon_marinus
ENSLACG00000008723	PUM2	89	85.728	ENSPCIG00000022139	PUM2	100	85.542	Phascolarctos_cinereus
ENSLACG00000008723	PUM2	100	71.268	ENSPFOG00000019208	pum2	100	72.552	Poecilia_formosa
ENSLACG00000008723	PUM2	100	72.668	ENSPLAG00000001826	pum2	100	73.977	Poecilia_latipinna
ENSLACG00000008723	PUM2	100	72.668	ENSPMEG00000015766	pum2	100	75.413	Poecilia_mexicana
ENSLACG00000008723	PUM2	89	90.943	ENSPPYG00000012617	PUM2	100	89.823	Pongo_abelii
ENSLACG00000008723	PUM2	63	97.826	ENSPCAG00000008001	PUM2	70	97.826	Procavia_capensis
ENSLACG00000008723	PUM2	88	91.202	ENSPCOG00000019636	PUM2	100	90.066	Propithecus_coquereli
ENSLACG00000008723	PUM2	87	85.024	ENSPVAG00000002920	PUM2	100	83.886	Pteropus_vampyrus
ENSLACG00000008723	PUM2	100	72.676	ENSPNYG00000022901	pum2	100	73.349	Pundamilia_nyererei
ENSLACG00000008723	PUM2	99	73.418	ENSPNAG00000008025	pum2	99	73.390	Pygocentrus_nattereri
ENSLACG00000008723	PUM2	89	88.433	ENSRNOG00000006180	Pum2	100	88.340	Rattus_norvegicus
ENSLACG00000008723	PUM2	89	90.850	ENSRBIG00000044880	PUM2	100	89.729	Rhinopithecus_bieti
ENSLACG00000008723	PUM2	89	90.578	ENSSBOG00000022007	PUM2	100	89.459	Saimiri_boliviensis_boliviensis
ENSLACG00000008723	PUM2	89	85.018	ENSSHAG00000002778	PUM2	100	84.743	Sarcophilus_harrisii
ENSLACG00000008723	PUM2	91	80.083	ENSSFOG00015003476	pum2	100	79.753	Scleropages_formosus
ENSLACG00000008723	PUM2	100	72.712	ENSSMAG00000018236	pum2	100	74.223	Scophthalmus_maximus
ENSLACG00000008723	PUM2	92	74.074	ENSSDUG00000001800	pum2	100	76.107	Seriola_dumerili
ENSLACG00000008723	PUM2	100	73.181	ENSSLDG00000000981	pum2	100	74.795	Seriola_lalandi_dorsalis
ENSLACG00000008723	PUM2	85	81.293	ENSSARG00000010992	PUM2	86	80.612	Sorex_araneus
ENSLACG00000008723	PUM2	88	91.501	ENSSPUG00000017012	PUM2	99	91.029	Sphenodon_punctatus
ENSLACG00000008723	PUM2	100	73.753	ENSSPAG00000022948	pum2	100	74.877	Stegastes_partitus
ENSLACG00000008723	PUM2	89	90.196	ENSSSCG00000008600	PUM2	100	92.212	Sus_scrofa
ENSLACG00000008723	PUM2	89	90.841	ENSTGUG00000013149	PUM2	100	90.654	Taeniopygia_guttata
ENSLACG00000008723	PUM2	100	71.616	ENSTRUG00000018167	pum2	100	71.044	Takifugu_rubripes
ENSLACG00000008723	PUM2	100	72.876	ENSTNIG00000003116	pum2	100	73.590	Tetraodon_nigroviridis
ENSLACG00000008723	PUM2	71	95.935	ENSTBEG00000008729	PUM2	86	95.935	Tupaia_belangeri
ENSLACG00000008723	PUM2	89	90.112	ENSTTRG00000004887	PUM2	100	88.993	Tursiops_truncatus
ENSLACG00000008723	PUM2	64	92.784	ENSUAMG00000008120	PUM2	98	91.237	Ursus_americanus
ENSLACG00000008723	PUM2	89	90.578	ENSUMAG00000023198	PUM2	100	89.459	Ursus_maritimus
ENSLACG00000008723	PUM2	89	90.570	ENSVPAG00000005056	PUM2	100	89.449	Vicugna_pacos
ENSLACG00000008723	PUM2	89	90.672	ENSVVUG00000014829	PUM2	100	89.552	Vulpes_vulpes
ENSLACG00000008723	PUM2	100	78.542	ENSXETG00000008903	pum2	100	77.879	Xenopus_tropicalis
ENSLACG00000008723	PUM2	94	73.891	ENSXCOG00000002556	pum2	100	75.413	Xiphophorus_couchianus
ENSLACG00000008723	PUM2	100	72.549	ENSXMAG00000017682	pum2	100	74.020	Xiphophorus_maculatus