EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008852 (Gene tree)
Gene ID: 102357929
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 27711 bases
Position: chrJH128532.1:374578-402288
Accession: 102357929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010041	Exo_endo_phos	PF03372.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010118	TDP2-201	5590	XM_006009189	ENSLACP00000010041	366 (aa)	XP_006009251	H3AK70

Gene Model

Click here to download ENSLACG00000008852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008852	TDP2	95	58.857	ENSG00000111802	TDP2	91	63.669	Homo_sapiens
ENSLACG00000008852	TDP2	69	52.756	ENSAPOG00000018379	-	89	52.756	Acanthochromis_polyacanthus
ENSLACG00000008852	TDP2	76	63.701	ENSAMEG00000010230	TDP2	100	63.701	Ailuropoda_melanoleuca
ENSLACG00000008852	TDP2	57	47.847	ENSAOCG00000010081	-	84	47.847	Amphiprion_ocellaris
ENSLACG00000008852	TDP2	69	51.172	ENSAPEG00000004208	-	91	51.172	Amphiprion_percula
ENSLACG00000008852	TDP2	81	46.644	ENSATEG00000010663	-	94	46.644	Anabas_testudineus
ENSLACG00000008852	TDP2	94	62.139	ENSACAG00000002332	TDP2	93	61.932	Anolis_carolinensis
ENSLACG00000008852	TDP2	95	59.312	ENSANAG00000020033	TDP2	94	59.312	Aotus_nancymaae
ENSLACG00000008852	TDP2	79	48.123	ENSACLG00000016132	tdp2b	99	48.123	Astatotilapia_calliptera
ENSLACG00000008852	TDP2	69	53.937	ENSACLG00000016148	tdp2b	90	53.937	Astatotilapia_calliptera
ENSLACG00000008852	TDP2	79	48.464	ENSACLG00000016174	tdp2b	99	48.464	Astatotilapia_calliptera
ENSLACG00000008852	TDP2	95	52.520	ENSAMXG00000011775	tdp2b	97	52.520	Astyanax_mexicanus
ENSLACG00000008852	TDP2	72	52.060	ENSAMXG00000036549	tdp2a	86	52.060	Astyanax_mexicanus
ENSLACG00000008852	TDP2	95	59.259	ENSBTAG00000000365	TDP2	94	59.259	Bos_taurus
ENSLACG00000008852	TDP2	92	33.333	WBGene00013405	tdpt-1	86	33.528	Caenorhabditis_elegans
ENSLACG00000008852	TDP2	95	60.286	ENSCJAG00000006074	TDP2	91	64.748	Callithrix_jacchus
ENSLACG00000008852	TDP2	95	60.114	ENSCJAG00000021963	-	94	60.114	Callithrix_jacchus
ENSLACG00000008852	TDP2	95	59.714	ENSCAFG00000010428	TDP2	96	64.769	Canis_familiaris
ENSLACG00000008852	TDP2	76	64.769	ENSCAFG00020009994	TDP2	96	64.769	Canis_lupus_dingo
ENSLACG00000008852	TDP2	76	64.413	ENSCHIG00000015294	-	95	64.311	Capra_hircus
ENSLACG00000008852	TDP2	86	59.434	ENSTSYG00000037199	TDP2	100	59.434	Carlito_syrichta
ENSLACG00000008852	TDP2	95	59.375	ENSCPOG00000006390	TDP2	95	59.375	Cavia_porcellus
ENSLACG00000008852	TDP2	95	59.714	ENSCCAG00000022734	TDP2	91	64.029	Cebus_capucinus
ENSLACG00000008852	TDP2	95	59.143	ENSCATG00000022076	TDP2	91	64.029	Cercocebus_atys
ENSLACG00000008852	TDP2	95	59.091	ENSCLAG00000002072	TDP2	95	59.091	Chinchilla_lanigera
ENSLACG00000008852	TDP2	95	59.143	ENSCSAG00000007769	TDP2	95	59.143	Chlorocebus_sabaeus
ENSLACG00000008852	TDP2	95	63.099	ENSCPBG00000006551	TDP2	88	62.396	Chrysemys_picta_bellii
ENSLACG00000008852	TDP2	95	58.857	ENSCANG00000040122	TDP2	92	63.669	Colobus_angolensis_palliatus
ENSLACG00000008852	TDP2	95	53.846	ENSCGRG00001000384	Tdp2	91	53.846	Cricetulus_griseus_chok1gshd
ENSLACG00000008852	TDP2	95	52.450	ENSCGRG00000010250	Tdp2	93	53.890	Cricetulus_griseus_crigri
ENSLACG00000008852	TDP2	93	53.672	ENSCVAG00000003114	tdp2b	94	53.390	Cyprinodon_variegatus
ENSLACG00000008852	TDP2	67	53.878	ENSDARG00000069941	tdp2a	55	53.878	Danio_rerio
ENSLACG00000008852	TDP2	95	53.406	ENSDARG00000035954	tdp2b	96	53.406	Danio_rerio
ENSLACG00000008852	TDP2	95	59.714	ENSDNOG00000044082	TDP2	93	59.714	Dasypus_novemcinctus
ENSLACG00000008852	TDP2	76	63.830	ENSETEG00000019096	TDP2	100	63.830	Echinops_telfairi
ENSLACG00000008852	TDP2	69	49.213	ENSEBUG00000006535	tdp2a	59	49.213	Eptatretus_burgeri
ENSLACG00000008852	TDP2	95	60.684	ENSEASG00005007656	TDP2	94	60.684	Equus_asinus_asinus
ENSLACG00000008852	TDP2	95	60.684	ENSECAG00000014264	TDP2	94	60.684	Equus_caballus
ENSLACG00000008852	TDP2	95	58.453	ENSEEUG00000010776	TDP2	94	58.621	Erinaceus_europaeus
ENSLACG00000008852	TDP2	93	39.589	ENSELUG00000009321	tdp2a	77	48.594	Esox_lucius
ENSLACG00000008852	TDP2	94	53.887	ENSELUG00000016449	tdp2b	96	53.887	Esox_lucius
ENSLACG00000008852	TDP2	95	59.885	ENSFCAG00000025612	TDP2	94	59.885	Felis_catus
ENSLACG00000008852	TDP2	95	58.621	ENSFALG00000004710	TDP2	96	56.389	Ficedula_albicollis
ENSLACG00000008852	TDP2	76	64.184	ENSFDAG00000006512	TDP2	96	64.184	Fukomys_damarensis
ENSLACG00000008852	TDP2	72	50.000	ENSFHEG00000013560	-	92	50.000	Fundulus_heteroclitus
ENSLACG00000008852	TDP2	95	59.599	ENSGALG00000013637	TDP2	92	60.286	Gallus_gallus
ENSLACG00000008852	TDP2	99	60.106	ENSGAGG00000002853	TDP2	93	60.106	Gopherus_agassizii
ENSLACG00000008852	TDP2	95	58.857	ENSGGOG00000014237	TDP2	91	63.669	Gorilla_gorilla
ENSLACG00000008852	TDP2	54	54.315	ENSHBUG00000005421	-	82	54.315	Haplochromis_burtoni
ENSLACG00000008852	TDP2	95	54.039	ENSHBUG00000002714	tdp2b	96	54.039	Haplochromis_burtoni
ENSLACG00000008852	TDP2	95	59.885	ENSHGLG00000008655	TDP2	95	59.885	Heterocephalus_glaber_female
ENSLACG00000008852	TDP2	95	59.885	ENSHGLG00100019087	TDP2	95	59.885	Heterocephalus_glaber_male
ENSLACG00000008852	TDP2	95	53.804	ENSIPUG00000013691	tdp2b	96	53.804	Ictalurus_punctatus
ENSLACG00000008852	TDP2	95	53.448	ENSJJAG00000021685	Tdp2	97	53.448	Jaculus_jaculus
ENSLACG00000008852	TDP2	69	53.725	ENSKMAG00000015485	-	82	53.725	Kryptolebias_marmoratus
ENSLACG00000008852	TDP2	75	61.372	ENSLOCG00000005817	tdp2b	99	61.372	Lepisosteus_oculatus
ENSLACG00000008852	TDP2	95	60.458	ENSLAFG00000002567	TDP2	97	60.458	Loxodonta_africana
ENSLACG00000008852	TDP2	95	59.429	ENSMFAG00000045296	TDP2	91	64.388	Macaca_fascicularis
ENSLACG00000008852	TDP2	95	59.429	ENSMMUG00000009803	TDP2	95	59.429	Macaca_mulatta
ENSLACG00000008852	TDP2	95	59.429	ENSMNEG00000038003	TDP2	91	64.388	Macaca_nemestrina
ENSLACG00000008852	TDP2	95	59.429	ENSMLEG00000028883	TDP2	91	64.029	Mandrillus_leucophaeus
ENSLACG00000008852	TDP2	94	53.736	ENSMAMG00000013654	tdp2b	95	53.736	Mastacembelus_armatus
ENSLACG00000008852	TDP2	79	47.945	ENSMZEG00005004126	tdp2b	99	47.945	Maylandia_zebra
ENSLACG00000008852	TDP2	69	50.000	ENSMZEG00005004103	tdp2b	85	50.000	Maylandia_zebra
ENSLACG00000008852	TDP2	69	53.150	ENSMZEG00005004153	tdp2b	89	53.150	Maylandia_zebra
ENSLACG00000008852	TDP2	95	53.760	ENSMZEG00005003950	tdp2b	96	53.760	Maylandia_zebra
ENSLACG00000008852	TDP2	67	52.227	ENSMZEG00005004055	tdp2b	82	52.227	Maylandia_zebra
ENSLACG00000008852	TDP2	69	45.914	ENSMZEG00005003980	-	83	45.914	Maylandia_zebra
ENSLACG00000008852	TDP2	71	53.558	ENSMZEG00005004077	tdp2b	90	53.558	Maylandia_zebra
ENSLACG00000008852	TDP2	95	59.714	ENSMGAG00000008014	TDP2	92	59.714	Meleagris_gallopavo
ENSLACG00000008852	TDP2	95	55.398	ENSMAUG00000014451	Tdp2	91	55.398	Mesocricetus_auratus
ENSLACG00000008852	TDP2	95	59.599	ENSMICG00000000039	TDP2	95	63.214	Microcebus_murinus
ENSLACG00000008852	TDP2	95	55.747	ENSMOCG00000002823	Tdp2	91	55.747	Microtus_ochrogaster
ENSLACG00000008852	TDP2	88	58.333	ENSMODG00000011653	TDP2	98	58.333	Monodelphis_domestica
ENSLACG00000008852	TDP2	68	53.360	ENSMALG00000005368	-	85	53.360	Monopterus_albus
ENSLACG00000008852	TDP2	95	54.755	MGP_CAROLIEiJ_G0018354	Tdp2	91	54.755	Mus_caroli
ENSLACG00000008852	TDP2	95	55.043	ENSMUSG00000035958	Tdp2	91	55.043	Mus_musculus
ENSLACG00000008852	TDP2	95	53.890	MGP_PahariEiJ_G0019417	Tdp2	91	53.890	Mus_pahari
ENSLACG00000008852	TDP2	95	55.747	MGP_SPRETEiJ_G0019220	Tdp2	91	55.747	Mus_spretus
ENSLACG00000008852	TDP2	95	59.429	ENSMPUG00000004516	TDP2	95	59.714	Mustela_putorius_furo
ENSLACG00000008852	TDP2	93	56.686	ENSMLUG00000013506	TDP2	93	56.977	Myotis_lucifugus
ENSLACG00000008852	TDP2	93	53.333	ENSNGAG00000001375	Tdp2	90	53.333	Nannospalax_galili
ENSLACG00000008852	TDP2	95	59.143	ENSNLEG00000002447	TDP2	96	59.143	Nomascus_leucogenys
ENSLACG00000008852	TDP2	95	60.684	ENSOPRG00000016299	TDP2	97	60.684	Ochotona_princeps
ENSLACG00000008852	TDP2	76	64.748	ENSODEG00000014018	TDP2	95	64.748	Octodon_degus
ENSLACG00000008852	TDP2	95	60.571	ENSOCUG00000013773	TDP2	94	60.571	Oryctolagus_cuniculus
ENSLACG00000008852	TDP2	73	50.735	ENSORLG00000001661	-	98	50.735	Oryzias_latipes
ENSLACG00000008852	TDP2	73	51.111	ENSORLG00020004634	-	97	51.111	Oryzias_latipes_hni
ENSLACG00000008852	TDP2	74	46.350	ENSORLG00015008190	-	98	46.350	Oryzias_latipes_hsok
ENSLACG00000008852	TDP2	75	51.264	ENSOMEG00000015899	-	95	52.140	Oryzias_melastigma
ENSLACG00000008852	TDP2	95	60.458	ENSOGAG00000025303	TDP2	93	60.458	Otolemur_garnettii
ENSLACG00000008852	TDP2	95	59.143	ENSPPAG00000029023	TDP2	92	64.029	Pan_paniscus
ENSLACG00000008852	TDP2	95	59.312	ENSPPRG00000015398	TDP2	94	59.312	Panthera_pardus
ENSLACG00000008852	TDP2	76	63.441	ENSPTIG00000018574	TDP2	95	63.441	Panthera_tigris_altaica
ENSLACG00000008852	TDP2	95	59.143	ENSPTRG00000017778	TDP2	91	64.029	Pan_troglodytes
ENSLACG00000008852	TDP2	95	59.143	ENSPANG00000017590	TDP2	91	64.029	Papio_anubis
ENSLACG00000008852	TDP2	95	54.318	ENSPKIG00000006483	tdp2b	96	54.318	Paramormyrops_kingsleyae
ENSLACG00000008852	TDP2	76	66.547	ENSPSIG00000004948	TDP2	96	66.547	Pelodiscus_sinensis
ENSLACG00000008852	TDP2	95	55.840	ENSPEMG00000001788	Tdp2	91	56.484	Peromyscus_maniculatus_bairdii
ENSLACG00000008852	TDP2	69	47.940	ENSPMAG00000001570	tdp2b	97	48.689	Petromyzon_marinus
ENSLACG00000008852	TDP2	95	59.155	ENSPCIG00000007316	TDP2	89	59.155	Phascolarctos_cinereus
ENSLACG00000008852	TDP2	76	47.518	ENSPFOG00000017990	-	95	47.518	Poecilia_formosa
ENSLACG00000008852	TDP2	68	50.988	ENSPLAG00000019439	-	80	50.988	Poecilia_latipinna
ENSLACG00000008852	TDP2	70	50.385	ENSPMEG00000010824	-	91	49.259	Poecilia_mexicana
ENSLACG00000008852	TDP2	95	59.143	ENSPPYG00000016282	TDP2	87	59.143	Pongo_abelii
ENSLACG00000008852	TDP2	95	60.458	ENSPCOG00000021415	TDP2	98	64.029	Propithecus_coquereli
ENSLACG00000008852	TDP2	95	54.039	ENSPNYG00000011532	tdp2b	96	54.039	Pundamilia_nyererei
ENSLACG00000008852	TDP2	78	46.053	ENSPNYG00000011504	tdp2b	99	46.053	Pundamilia_nyererei
ENSLACG00000008852	TDP2	53	45.876	ENSPNYG00000001944	-	68	50.909	Pundamilia_nyererei
ENSLACG00000008852	TDP2	67	55.285	ENSPNAG00000022162	tdp2a	79	47.742	Pygocentrus_nattereri
ENSLACG00000008852	TDP2	92	55.325	ENSRNOG00000018246	Tdp2	90	55.325	Rattus_norvegicus
ENSLACG00000008852	TDP2	95	59.312	ENSRBIG00000037119	TDP2	92	63.669	Rhinopithecus_bieti
ENSLACG00000008852	TDP2	95	58.571	ENSRROG00000005025	TDP2	92	63.309	Rhinopithecus_roxellana
ENSLACG00000008852	TDP2	95	60.172	ENSSBOG00000028734	TDP2	91	63.669	Saimiri_boliviensis_boliviensis
ENSLACG00000008852	TDP2	95	59.091	ENSSHAG00000002506	TDP2	92	59.091	Sarcophilus_harrisii
ENSLACG00000008852	TDP2	70	54.510	ENSSFOG00015011322	-	72	54.510	Scleropages_formosus
ENSLACG00000008852	TDP2	76	61.290	ENSSARG00000013547	TDP2	100	61.290	Sorex_araneus
ENSLACG00000008852	TDP2	95	60.942	ENSSPUG00000008288	TDP2	97	60.274	Sphenodon_punctatus
ENSLACG00000008852	TDP2	95	60.172	ENSSSCG00000001092	TDP2	94	60.172	Sus_scrofa
ENSLACG00000008852	TDP2	70	67.059	ENSTGUG00000009035	TDP2	98	67.059	Taeniopygia_guttata
ENSLACG00000008852	TDP2	94	51.955	ENSTRUG00000014347	tdp2b	96	51.955	Takifugu_rubripes
ENSLACG00000008852	TDP2	68	52.191	ENSTRUG00000012218	-	87	52.191	Takifugu_rubripes
ENSLACG00000008852	TDP2	95	52.825	ENSTNIG00000017792	tdp2b	96	52.825	Tetraodon_nigroviridis
ENSLACG00000008852	TDP2	69	53.725	ENSTNIG00000010260	TDP2	97	53.725	Tetraodon_nigroviridis
ENSLACG00000008852	TDP2	95	59.312	ENSTTRG00000016376	TDP2	94	59.714	Tursiops_truncatus
ENSLACG00000008852	TDP2	93	58.551	ENSUAMG00000025939	TDP2	93	58.551	Ursus_americanus
ENSLACG00000008852	TDP2	76	63.345	ENSUMAG00000020111	TDP2	93	63.345	Ursus_maritimus
ENSLACG00000008852	TDP2	98	60.763	ENSXETG00000014826	tdp2	98	60.763	Xenopus_tropicalis
ENSLACG00000008852	TDP2	76	48.070	ENSXCOG00000010778	-	79	48.070	Xiphophorus_couchianus
ENSLACG00000008852	TDP2	70	50.382	ENSXMAG00000022252	-	75	50.382	Xiphophorus_maculatus