EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008869 (Gene tree)
Gene ID: 102366079
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 16036 bases
Position: chrJH126713.1:374453-390488
Accession: 102366079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010062	PseudoU_synth_2	PF00849.22	7.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010139	RPUSD1-201	3551	XM_005993107	ENSLACP00000010062	302 (aa)	XP_005993169	H3AK91

Gene Model

Click here to download ENSLACG00000008869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008869	RPUSD1	99	61.039	ENSG00000007376	RPUSD1	100	72.024	Homo_sapiens
ENSLACG00000008869	RPUSD1	99	61.794	ENSAPOG00000022221	rpusd1	98	61.794	Acanthochromis_polyacanthus
ENSLACG00000008869	RPUSD1	99	62.914	ENSAMEG00000007461	RPUSD1	99	62.914	Ailuropoda_melanoleuca
ENSLACG00000008869	RPUSD1	99	61.311	ENSACIG00000015863	rpusd1	98	62.623	Amphilophus_citrinellus
ENSLACG00000008869	RPUSD1	99	60.197	ENSAOCG00000021975	rpusd1	95	60.855	Amphiprion_ocellaris
ENSLACG00000008869	RPUSD1	99	60.526	ENSAPEG00000001316	rpusd1	95	61.184	Amphiprion_percula
ENSLACG00000008869	RPUSD1	99	60.855	ENSATEG00000002984	rpusd1	98	61.184	Anabas_testudineus
ENSLACG00000008869	RPUSD1	77	71.849	ENSAPLG00000012316	RPUSD1	98	71.849	Anas_platyrhynchos
ENSLACG00000008869	RPUSD1	99	72.517	ENSACAG00000008953	RPUSD1	99	72.517	Anolis_carolinensis
ENSLACG00000008869	RPUSD1	99	61.364	ENSANAG00000024709	RPUSD1	99	61.364	Aotus_nancymaae
ENSLACG00000008869	RPUSD1	99	59.048	ENSACLG00000013692	rpusd1	98	61.765	Astatotilapia_calliptera
ENSLACG00000008869	RPUSD1	99	62.914	ENSAMXG00000019802	rpusd1	100	62.914	Astyanax_mexicanus
ENSLACG00000008869	RPUSD1	99	64.474	ENSBTAG00000000179	RPUSD1	99	64.474	Bos_taurus
ENSLACG00000008869	RPUSD1	99	61.165	ENSCJAG00000012253	RPUSD1	99	60.129	Callithrix_jacchus
ENSLACG00000008869	RPUSD1	99	60.855	ENSCAFG00000019614	RPUSD1	99	60.841	Canis_familiaris
ENSLACG00000008869	RPUSD1	99	60.855	ENSCAFG00020008891	RPUSD1	99	60.841	Canis_lupus_dingo
ENSLACG00000008869	RPUSD1	99	64.803	ENSCHIG00000012872	RPUSD1	99	64.803	Capra_hircus
ENSLACG00000008869	RPUSD1	99	61.842	ENSTSYG00000036934	RPUSD1	99	61.842	Carlito_syrichta
ENSLACG00000008869	RPUSD1	99	61.589	ENSCAPG00000014219	RPUSD1	99	61.589	Cavia_aperea
ENSLACG00000008869	RPUSD1	99	61.589	ENSCPOG00000034604	RPUSD1	99	61.589	Cavia_porcellus
ENSLACG00000008869	RPUSD1	99	61.688	ENSCCAG00000034385	RPUSD1	99	61.688	Cebus_capucinus
ENSLACG00000008869	RPUSD1	99	61.364	ENSCATG00000042983	RPUSD1	99	60.772	Cercocebus_atys
ENSLACG00000008869	RPUSD1	99	60.927	ENSCLAG00000013966	RPUSD1	99	60.656	Chinchilla_lanigera
ENSLACG00000008869	RPUSD1	99	61.039	ENSCSAG00000012121	RPUSD1	99	61.039	Chlorocebus_sabaeus
ENSLACG00000008869	RPUSD1	99	76.490	ENSCPBG00000021101	RPUSD1	99	76.490	Chrysemys_picta_bellii
ENSLACG00000008869	RPUSD1	84	68.627	ENSCANG00000028576	RPUSD1	91	68.627	Colobus_angolensis_palliatus
ENSLACG00000008869	RPUSD1	99	63.607	ENSCGRG00001014253	Rpusd1	99	63.607	Cricetulus_griseus_chok1gshd
ENSLACG00000008869	RPUSD1	99	63.607	ENSCGRG00000017995	Rpusd1	99	63.607	Cricetulus_griseus_crigri
ENSLACG00000008869	RPUSD1	99	61.538	ENSCSEG00000018512	rpusd1	99	61.538	Cynoglossus_semilaevis
ENSLACG00000008869	RPUSD1	99	62.207	ENSCVAG00000022746	rpusd1	98	62.207	Cyprinodon_variegatus
ENSLACG00000008869	RPUSD1	99	68.000	ENSDARG00000060192	rpusd1	99	68.000	Danio_rerio
ENSLACG00000008869	RPUSD1	99	61.513	ENSDNOG00000003721	RPUSD1	99	61.513	Dasypus_novemcinctus
ENSLACG00000008869	RPUSD1	99	62.583	ENSDORG00000026656	Rpusd1	99	62.583	Dipodomys_ordii
ENSLACG00000008869	RPUSD1	97	46.667	ENSEBUG00000008767	rpusd1	92	46.667	Eptatretus_burgeri
ENSLACG00000008869	RPUSD1	99	60.256	ENSEASG00005018421	RPUSD1	75	61.538	Equus_asinus_asinus
ENSLACG00000008869	RPUSD1	99	59.211	ENSELUG00000014307	rpusd1	88	60.855	Esox_lucius
ENSLACG00000008869	RPUSD1	99	61.589	ENSFCAG00000010359	RPUSD1	99	61.589	Felis_catus
ENSLACG00000008869	RPUSD1	99	73.000	ENSFALG00000003211	RPUSD1	99	73.000	Ficedula_albicollis
ENSLACG00000008869	RPUSD1	99	60.328	ENSFDAG00000013398	RPUSD1	99	60.328	Fukomys_damarensis
ENSLACG00000008869	RPUSD1	99	60.927	ENSFHEG00000004736	rpusd1	98	60.927	Fundulus_heteroclitus
ENSLACG00000008869	RPUSD1	99	62.376	ENSGMOG00000010756	rpusd1	98	63.487	Gadus_morhua
ENSLACG00000008869	RPUSD1	99	75.497	ENSGALG00000005315	RPUSD1	99	75.497	Gallus_gallus
ENSLACG00000008869	RPUSD1	99	62.829	ENSGAFG00000009886	rpusd1	98	62.829	Gambusia_affinis
ENSLACG00000008869	RPUSD1	98	60.596	ENSGACG00000014276	rpusd1	98	60.927	Gasterosteus_aculeatus
ENSLACG00000008869	RPUSD1	99	76.159	ENSGAGG00000004181	RPUSD1	99	76.159	Gopherus_agassizii
ENSLACG00000008869	RPUSD1	99	62.013	ENSGGOG00000013997	RPUSD1	99	61.812	Gorilla_gorilla
ENSLACG00000008869	RPUSD1	99	59.365	ENSHBUG00000023728	rpusd1	98	62.092	Haplochromis_burtoni
ENSLACG00000008869	RPUSD1	99	60.927	ENSHGLG00000002595	RPUSD1	99	60.656	Heterocephalus_glaber_female
ENSLACG00000008869	RPUSD1	99	60.927	ENSHGLG00100014303	RPUSD1	99	60.656	Heterocephalus_glaber_male
ENSLACG00000008869	RPUSD1	99	61.538	ENSHCOG00000002390	rpusd1	99	61.538	Hippocampus_comes
ENSLACG00000008869	RPUSD1	99	66.225	ENSIPUG00000001570	rpusd1	99	66.225	Ictalurus_punctatus
ENSLACG00000008869	RPUSD1	99	63.245	ENSSTOG00000004276	RPUSD1	99	63.245	Ictidomys_tridecemlineatus
ENSLACG00000008869	RPUSD1	99	61.921	ENSJJAG00000015696	Rpusd1	99	61.921	Jaculus_jaculus
ENSLACG00000008869	RPUSD1	99	61.716	ENSKMAG00000017287	rpusd1	98	61.513	Kryptolebias_marmoratus
ENSLACG00000008869	RPUSD1	99	62.623	ENSLBEG00000013354	RPUSD1	98	61.842	Labrus_bergylta
ENSLACG00000008869	RPUSD1	99	62.623	ENSLBEG00000022502	rpusd1	98	61.842	Labrus_bergylta
ENSLACG00000008869	RPUSD1	71	78.505	ENSLOCG00000005682	rpusd1	99	78.505	Lepisosteus_oculatus
ENSLACG00000008869	RPUSD1	99	61.513	ENSLAFG00000002115	RPUSD1	99	61.513	Loxodonta_africana
ENSLACG00000008869	RPUSD1	99	61.364	ENSMFAG00000003961	RPUSD1	99	61.364	Macaca_fascicularis
ENSLACG00000008869	RPUSD1	99	61.364	ENSMMUG00000000842	RPUSD1	99	61.364	Macaca_mulatta
ENSLACG00000008869	RPUSD1	99	61.364	ENSMNEG00000042712	RPUSD1	99	61.364	Macaca_nemestrina
ENSLACG00000008869	RPUSD1	99	61.364	ENSMLEG00000030591	RPUSD1	99	61.364	Mandrillus_leucophaeus
ENSLACG00000008869	RPUSD1	99	60.000	ENSMAMG00000004735	rpusd1	98	60.328	Mastacembelus_armatus
ENSLACG00000008869	RPUSD1	99	59.048	ENSMZEG00005003214	rpusd1	98	61.765	Maylandia_zebra
ENSLACG00000008869	RPUSD1	98	74.000	ENSMGAG00000005447	RPUSD1	99	74.000	Meleagris_gallopavo
ENSLACG00000008869	RPUSD1	84	61.868	ENSMAUG00000019998	Rpusd1	98	61.868	Mesocricetus_auratus
ENSLACG00000008869	RPUSD1	99	62.500	ENSMICG00000017561	RPUSD1	99	62.500	Microcebus_murinus
ENSLACG00000008869	RPUSD1	99	62.583	ENSMOCG00000014082	Rpusd1	99	62.583	Microtus_ochrogaster
ENSLACG00000008869	RPUSD1	99	58.086	ENSMMOG00000012569	rpusd1	99	59.866	Mola_mola
ENSLACG00000008869	RPUSD1	99	67.657	ENSMODG00000016882	RPUSD1	98	67.657	Monodelphis_domestica
ENSLACG00000008869	RPUSD1	99	60.000	ENSMALG00000017818	rpusd1	98	60.714	Monopterus_albus
ENSLACG00000008869	RPUSD1	99	62.252	MGP_CAROLIEiJ_G0021244	Rpusd1	99	62.252	Mus_caroli
ENSLACG00000008869	RPUSD1	99	62.583	ENSMUSG00000041199	Rpusd1	99	62.583	Mus_musculus
ENSLACG00000008869	RPUSD1	99	61.842	MGP_PahariEiJ_G0023562	Rpusd1	99	62.171	Mus_pahari
ENSLACG00000008869	RPUSD1	99	62.583	MGP_SPRETEiJ_G0022155	Rpusd1	99	62.583	Mus_spretus
ENSLACG00000008869	RPUSD1	99	60.596	ENSMPUG00000015897	RPUSD1	99	61.111	Mustela_putorius_furo
ENSLACG00000008869	RPUSD1	99	60.912	ENSMLUG00000001089	RPUSD1	99	60.912	Myotis_lucifugus
ENSLACG00000008869	RPUSD1	99	63.245	ENSNGAG00000003595	Rpusd1	99	63.245	Nannospalax_galili
ENSLACG00000008869	RPUSD1	99	63.667	ENSNBRG00000006457	rpusd1	98	63.087	Neolamprologus_brichardi
ENSLACG00000008869	RPUSD1	54	51.163	ENSNLEG00000008424	-	98	49.724	Nomascus_leucogenys
ENSLACG00000008869	RPUSD1	99	70.000	ENSMEUG00000016049	RPUSD1	99	70.000	Notamacropus_eugenii
ENSLACG00000008869	RPUSD1	99	55.960	ENSOPRG00000008340	RPUSD1	99	55.960	Ochotona_princeps
ENSLACG00000008869	RPUSD1	99	61.258	ENSODEG00000016945	RPUSD1	99	61.258	Octodon_degus
ENSLACG00000008869	RPUSD1	98	59.554	ENSONIG00000015672	rpusd1	99	61.967	Oreochromis_niloticus
ENSLACG00000008869	RPUSD1	99	62.951	ENSORLG00000013009	rpusd1	99	62.951	Oryzias_latipes
ENSLACG00000008869	RPUSD1	99	62.295	ENSORLG00020010382	rpusd1	99	62.295	Oryzias_latipes_hni
ENSLACG00000008869	RPUSD1	99	62.951	ENSORLG00015021354	rpusd1	99	62.951	Oryzias_latipes_hsok
ENSLACG00000008869	RPUSD1	99	63.758	ENSOMEG00000021426	rpusd1	98	63.366	Oryzias_melastigma
ENSLACG00000008869	RPUSD1	99	62.662	ENSOGAG00000003795	RPUSD1	99	61.514	Otolemur_garnettii
ENSLACG00000008869	RPUSD1	99	64.474	ENSOARG00000014254	RPUSD1	99	63.259	Ovis_aries
ENSLACG00000008869	RPUSD1	99	61.364	ENSPPAG00000034797	RPUSD1	99	61.165	Pan_paniscus
ENSLACG00000008869	RPUSD1	99	61.921	ENSPPRG00000012389	RPUSD1	99	61.921	Panthera_pardus
ENSLACG00000008869	RPUSD1	99	61.258	ENSPTIG00000008545	RPUSD1	91	61.258	Panthera_tigris_altaica
ENSLACG00000008869	RPUSD1	99	61.364	ENSPTRG00000007565	RPUSD1	99	61.165	Pan_troglodytes
ENSLACG00000008869	RPUSD1	99	61.688	ENSPANG00000024401	RPUSD1	99	61.688	Papio_anubis
ENSLACG00000008869	RPUSD1	99	66.885	ENSPKIG00000018890	rpusd1	91	66.885	Paramormyrops_kingsleyae
ENSLACG00000008869	RPUSD1	99	77.152	ENSPSIG00000013945	RPUSD1	99	77.152	Pelodiscus_sinensis
ENSLACG00000008869	RPUSD1	99	63.087	ENSPMGG00000014950	rpusd1	98	63.087	Periophthalmus_magnuspinnatus
ENSLACG00000008869	RPUSD1	99	63.245	ENSPEMG00000000497	Rpusd1	99	63.245	Peromyscus_maniculatus_bairdii
ENSLACG00000008869	RPUSD1	86	55.769	ENSPMAG00000001563	rpusd1	99	51.466	Petromyzon_marinus
ENSLACG00000008869	RPUSD1	99	70.333	ENSPCIG00000021216	-	93	70.333	Phascolarctos_cinereus
ENSLACG00000008869	RPUSD1	99	64.026	ENSPFOG00000007946	rpusd1	98	64.026	Poecilia_formosa
ENSLACG00000008869	RPUSD1	99	64.026	ENSPLAG00000011925	rpusd1	98	64.026	Poecilia_latipinna
ENSLACG00000008869	RPUSD1	99	64.026	ENSPMEG00000002910	rpusd1	98	64.026	Poecilia_mexicana
ENSLACG00000008869	RPUSD1	99	63.816	ENSPREG00000019851	rpusd1	98	63.816	Poecilia_reticulata
ENSLACG00000008869	RPUSD1	99	50.327	ENSPCAG00000002258	RPUSD1	99	50.327	Procavia_capensis
ENSLACG00000008869	RPUSD1	99	61.812	ENSPCOG00000022582	RPUSD1	99	61.812	Propithecus_coquereli
ENSLACG00000008869	RPUSD1	99	58.442	ENSPVAG00000013104	RPUSD1	99	57.556	Pteropus_vampyrus
ENSLACG00000008869	RPUSD1	99	62.416	ENSPNYG00000024076	rpusd1	98	62.092	Pundamilia_nyererei
ENSLACG00000008869	RPUSD1	99	59.136	ENSPNAG00000013806	rpusd1	100	59.136	Pygocentrus_nattereri
ENSLACG00000008869	RPUSD1	99	62.914	ENSRNOG00000023639	Rpusd1	99	62.914	Rattus_norvegicus
ENSLACG00000008869	RPUSD1	99	59.871	ENSRBIG00000030238	RPUSD1	99	60.841	Rhinopithecus_bieti
ENSLACG00000008869	RPUSD1	99	59.871	ENSRROG00000036663	RPUSD1	99	60.841	Rhinopithecus_roxellana
ENSLACG00000008869	RPUSD1	99	62.252	ENSSBOG00000033063	RPUSD1	99	62.252	Saimiri_boliviensis_boliviensis
ENSLACG00000008869	RPUSD1	99	69.333	ENSSHAG00000013500	RPUSD1	99	69.333	Sarcophilus_harrisii
ENSLACG00000008869	RPUSD1	99	69.103	ENSSFOG00015014394	rpusd1	100	69.103	Scleropages_formosus
ENSLACG00000008869	RPUSD1	99	60.526	ENSSMAG00000008045	rpusd1	91	61.184	Scophthalmus_maximus
ENSLACG00000008869	RPUSD1	83	68.924	ENSSDUG00000001829	rpusd1	95	61.842	Seriola_dumerili
ENSLACG00000008869	RPUSD1	83	68.924	ENSSLDG00000020853	rpusd1	95	61.842	Seriola_lalandi_dorsalis
ENSLACG00000008869	RPUSD1	55	73.653	ENSSARG00000011187	-	100	73.653	Sorex_araneus
ENSLACG00000008869	RPUSD1	63	66.138	ENSSPUG00000005119	-	99	66.138	Sphenodon_punctatus
ENSLACG00000008869	RPUSD1	99	61.842	ENSSPAG00000012708	rpusd1	98	62.171	Stegastes_partitus
ENSLACG00000008869	RPUSD1	99	61.688	ENSSSCG00000008000	RPUSD1	98	69.291	Sus_scrofa
ENSLACG00000008869	RPUSD1	84	80.237	ENSTGUG00000015375	RPUSD1	100	80.237	Taeniopygia_guttata
ENSLACG00000008869	RPUSD1	99	59.211	ENSTRUG00000003041	rpusd1	98	59.211	Takifugu_rubripes
ENSLACG00000008869	RPUSD1	99	57.383	ENSTNIG00000002660	rpusd1	99	57.383	Tetraodon_nigroviridis
ENSLACG00000008869	RPUSD1	99	62.662	ENSTTRG00000010167	RPUSD1	99	62.460	Tursiops_truncatus
ENSLACG00000008869	RPUSD1	99	62.583	ENSUAMG00000012736	RPUSD1	99	62.583	Ursus_americanus
ENSLACG00000008869	RPUSD1	99	62.171	ENSUMAG00000021174	RPUSD1	99	62.583	Ursus_maritimus
ENSLACG00000008869	RPUSD1	99	61.564	ENSVVUG00000012357	RPUSD1	99	61.564	Vulpes_vulpes
ENSLACG00000008869	RPUSD1	99	70.000	ENSXETG00000007184	rpusd1	99	70.000	Xenopus_tropicalis
ENSLACG00000008869	RPUSD1	99	62.171	ENSXCOG00000017930	rpusd1	98	62.171	Xiphophorus_couchianus
ENSLACG00000008869	RPUSD1	99	62.829	ENSXMAG00000024084	rpusd1	98	62.829	Xiphophorus_maculatus