EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000008870 (Gene tree)
Gene ID: -
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 18043 bases
Position: chrJH128114.1:376695-394737
Accession: 26565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010063	zf-U11-48K	PF05253.12	1.9e-21	1	2
ENSLACP00000010063	zf-U11-48K	PF05253.12	1.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010140	GTSF1-201	579	-	ENSLACP00000010063	193 (aa)	-	H3AK92

Gene Model

Click here to download ENSLACG00000008870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000008870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000008870	GTSF1	83	60.625	ENSG00000170627	GTSF1	96	60.625	Homo_sapiens
ENSLACG00000008870	GTSF1	76	50.000	ENSAPOG00000022724	-	95	50.000	Acanthochromis_polyacanthus
ENSLACG00000008870	GTSF1	82	60.759	ENSAMEG00000000939	GTSF1	94	60.759	Ailuropoda_melanoleuca
ENSLACG00000008870	GTSF1	76	49.315	ENSAOCG00000022214	-	68	49.315	Amphiprion_ocellaris
ENSLACG00000008870	GTSF1	70	52.941	ENSAPLG00000004814	GTSF1	98	52.941	Anas_platyrhynchos
ENSLACG00000008870	GTSF1	79	58.824	ENSACAG00000014260	-	88	58.824	Anolis_carolinensis
ENSLACG00000008870	GTSF1	59	44.737	ENSACAG00000029590	-	93	44.737	Anolis_carolinensis
ENSLACG00000008870	GTSF1	83	60.000	ENSANAG00000024529	GTSF1	96	60.000	Aotus_nancymaae
ENSLACG00000008870	GTSF1	82	60.759	ENSBTAG00000018085	GTSF1	95	60.759	Bos_taurus
ENSLACG00000008870	GTSF1	83	60.000	ENSCJAG00000039915	-	85	60.000	Callithrix_jacchus
ENSLACG00000008870	GTSF1	83	60.625	ENSCJAG00000018968	-	96	60.625	Callithrix_jacchus
ENSLACG00000008870	GTSF1	82	61.392	ENSCAFG00000006465	-	95	61.392	Canis_familiaris
ENSLACG00000008870	GTSF1	82	61.392	ENSCAFG00020020373	-	89	61.688	Canis_lupus_dingo
ENSLACG00000008870	GTSF1	82	61.392	ENSCHIG00000012215	-	92	61.392	Capra_hircus
ENSLACG00000008870	GTSF1	82	60.759	ENSTSYG00000004679	-	95	60.759	Carlito_syrichta
ENSLACG00000008870	GTSF1	82	50.633	ENSTSYG00000035266	-	94	50.633	Carlito_syrichta
ENSLACG00000008870	GTSF1	87	58.333	ENSCPOG00000008743	GTSF1	95	60.759	Cavia_porcellus
ENSLACG00000008870	GTSF1	82	53.416	ENSCCAG00000032808	GTSF1	99	53.416	Cebus_capucinus
ENSLACG00000008870	GTSF1	83	60.625	ENSCATG00000036328	GTSF1	96	60.625	Cercocebus_atys
ENSLACG00000008870	GTSF1	95	54.645	ENSCLAG00000012811	GTSF1	95	60.759	Chinchilla_lanigera
ENSLACG00000008870	GTSF1	80	60.645	ENSCSAG00000005394	GTSF1	98	60.645	Chlorocebus_sabaeus
ENSLACG00000008870	GTSF1	82	62.025	ENSCHOG00000001659	GTSF1	95	62.025	Choloepus_hoffmanni
ENSLACG00000008870	GTSF1	82	52.147	ENSCPBG00000024905	-	89	52.147	Chrysemys_picta_bellii
ENSLACG00000008870	GTSF1	79	60.784	ENSCPBG00000005134	-	66	60.784	Chrysemys_picta_bellii
ENSLACG00000008870	GTSF1	83	56.250	ENSCANG00000031776	-	96	56.250	Colobus_angolensis_palliatus
ENSLACG00000008870	GTSF1	83	59.375	ENSCANG00000033118	GTSF1	96	59.375	Colobus_angolensis_palliatus
ENSLACG00000008870	GTSF1	82	61.392	ENSCGRG00001013814	Gtsf1	95	61.392	Cricetulus_griseus_chok1gshd
ENSLACG00000008870	GTSF1	82	61.392	ENSCGRG00000007733	Gtsf1	95	61.392	Cricetulus_griseus_crigri
ENSLACG00000008870	GTSF1	81	61.783	ENSDNOG00000001438	-	79	61.783	Dasypus_novemcinctus
ENSLACG00000008870	GTSF1	82	62.025	ENSDORG00000003228	Gtsf1	95	62.025	Dipodomys_ordii
ENSLACG00000008870	GTSF1	82	62.025	ENSETEG00000009310	GTSF1	95	62.025	Echinops_telfairi
ENSLACG00000008870	GTSF1	82	60.759	ENSEASG00005010260	GTSF1	85	60.759	Equus_asinus_asinus
ENSLACG00000008870	GTSF1	82	60.759	ENSECAG00000013618	GTSF1	95	60.759	Equus_caballus
ENSLACG00000008870	GTSF1	82	62.025	ENSEEUG00000005185	GTSF1	95	62.025	Erinaceus_europaeus
ENSLACG00000008870	GTSF1	82	48.734	ENSFCAG00000023672	-	86	48.734	Felis_catus
ENSLACG00000008870	GTSF1	82	61.392	ENSFCAG00000010156	-	95	61.392	Felis_catus
ENSLACG00000008870	GTSF1	63	48.780	ENSFALG00000007613	-	98	48.780	Ficedula_albicollis
ENSLACG00000008870	GTSF1	95	54.098	ENSFDAG00000009383	GTSF1	95	60.127	Fukomys_damarensis
ENSLACG00000008870	GTSF1	79	54.194	ENSGALG00000001109	GTSF1	94	54.194	Gallus_gallus
ENSLACG00000008870	GTSF1	81	46.835	ENSGACG00000010783	-	85	46.835	Gasterosteus_aculeatus
ENSLACG00000008870	GTSF1	51	51.485	ENSGAGG00000016342	-	94	51.485	Gopherus_agassizii
ENSLACG00000008870	GTSF1	82	54.088	ENSGAGG00000011062	GTSF1	82	54.088	Gopherus_agassizii
ENSLACG00000008870	GTSF1	83	60.625	ENSGGOG00000016063	GTSF1	96	60.625	Gorilla_gorilla
ENSLACG00000008870	GTSF1	95	53.552	ENSHGLG00000002436	GTSF1	95	59.494	Heterocephalus_glaber_female
ENSLACG00000008870	GTSF1	95	53.552	ENSHGLG00100017301	GTSF1	95	59.494	Heterocephalus_glaber_male
ENSLACG00000008870	GTSF1	77	46.753	ENSIPUG00000002483	-	80	46.753	Ictalurus_punctatus
ENSLACG00000008870	GTSF1	82	61.392	ENSSTOG00000025170	GTSF1	95	61.392	Ictidomys_tridecemlineatus
ENSLACG00000008870	GTSF1	79	56.579	ENSJJAG00000017442	-	96	56.579	Jaculus_jaculus
ENSLACG00000008870	GTSF1	88	56.213	ENSJJAG00000003323	-	99	59.375	Jaculus_jaculus
ENSLACG00000008870	GTSF1	80	50.000	ENSKMAG00000006038	-	81	50.000	Kryptolebias_marmoratus
ENSLACG00000008870	GTSF1	82	61.392	ENSLAFG00000016318	GTSF1	95	61.392	Loxodonta_africana
ENSLACG00000008870	GTSF1	83	60.625	ENSMFAG00000041178	GTSF1	96	60.625	Macaca_fascicularis
ENSLACG00000008870	GTSF1	83	60.625	ENSMMUG00000003758	GTSF1	96	60.625	Macaca_mulatta
ENSLACG00000008870	GTSF1	83	60.625	ENSMNEG00000036779	GTSF1	96	60.625	Macaca_nemestrina
ENSLACG00000008870	GTSF1	83	60.625	ENSMLEG00000028375	GTSF1	96	60.625	Mandrillus_leucophaeus
ENSLACG00000008870	GTSF1	70	52.899	ENSMGAG00000000685	GTSF1	94	52.899	Meleagris_gallopavo
ENSLACG00000008870	GTSF1	87	43.713	ENSMAUG00000018746	Gtsf1	99	43.713	Mesocricetus_auratus
ENSLACG00000008870	GTSF1	82	62.025	ENSMICG00000008444	-	95	62.025	Microcebus_murinus
ENSLACG00000008870	GTSF1	82	61.392	ENSMOCG00000018889	Gtsf1	95	61.392	Microtus_ochrogaster
ENSLACG00000008870	GTSF1	82	63.924	ENSMODG00000019422	GTSF1	95	63.924	Monodelphis_domestica
ENSLACG00000008870	GTSF1	98	54.450	MGP_CAROLIEiJ_G0020379	Gtsf1	94	63.333	Mus_caroli
ENSLACG00000008870	GTSF1	98	54.450	ENSMUSG00000022487	Gtsf1	94	63.333	Mus_musculus
ENSLACG00000008870	GTSF1	98	54.974	MGP_PahariEiJ_G0020378	Gtsf1	94	64.167	Mus_pahari
ENSLACG00000008870	GTSF1	98	54.450	MGP_SPRETEiJ_G0021272	Gtsf1	94	63.333	Mus_spretus
ENSLACG00000008870	GTSF1	82	60.127	ENSMPUG00000019323	-	95	60.127	Mustela_putorius_furo
ENSLACG00000008870	GTSF1	82	59.119	ENSMPUG00000019140	-	95	59.119	Mustela_putorius_furo
ENSLACG00000008870	GTSF1	82	61.392	ENSMPUG00000005669	-	95	61.392	Mustela_putorius_furo
ENSLACG00000008870	GTSF1	82	62.658	ENSMLUG00000012961	-	95	62.658	Myotis_lucifugus
ENSLACG00000008870	GTSF1	82	60.127	ENSMLUG00000026557	-	95	60.127	Myotis_lucifugus
ENSLACG00000008870	GTSF1	82	60.759	ENSNGAG00000014213	Gtsf1	95	60.759	Nannospalax_galili
ENSLACG00000008870	GTSF1	83	61.250	ENSNLEG00000017635	GTSF1	96	61.250	Nomascus_leucogenys
ENSLACG00000008870	GTSF1	75	59.722	ENSMEUG00000016206	GTSF1	86	59.722	Notamacropus_eugenii
ENSLACG00000008870	GTSF1	82	48.101	ENSOPRG00000017277	GTSF1	95	48.101	Ochotona_princeps
ENSLACG00000008870	GTSF1	82	62.025	ENSODEG00000014220	GTSF1	95	62.025	Octodon_degus
ENSLACG00000008870	GTSF1	81	56.962	ENSOANG00000011386	GTSF1	94	56.962	Ornithorhynchus_anatinus
ENSLACG00000008870	GTSF1	82	60.127	ENSOCUG00000024495	GTSF1	95	60.127	Oryctolagus_cuniculus
ENSLACG00000008870	GTSF1	60	52.137	ENSORLG00015005017	-	72	52.137	Oryzias_latipes_hsok
ENSLACG00000008870	GTSF1	80	61.039	ENSOGAG00000017227	GTSF1	91	61.039	Otolemur_garnettii
ENSLACG00000008870	GTSF1	82	60.759	ENSOARG00000016162	GTSF1	95	60.759	Ovis_aries
ENSLACG00000008870	GTSF1	83	60.625	ENSPPAG00000028506	GTSF1	96	60.625	Pan_paniscus
ENSLACG00000008870	GTSF1	82	61.392	ENSPPRG00000004344	-	95	61.392	Panthera_pardus
ENSLACG00000008870	GTSF1	82	56.962	ENSPPRG00000017612	-	85	56.962	Panthera_pardus
ENSLACG00000008870	GTSF1	82	61.392	ENSPTIG00000020415	-	95	61.392	Panthera_tigris_altaica
ENSLACG00000008870	GTSF1	82	56.329	ENSPTIG00000010868	-	85	56.329	Panthera_tigris_altaica
ENSLACG00000008870	GTSF1	83	60.625	ENSPTRG00000005041	GTSF1	96	60.625	Pan_troglodytes
ENSLACG00000008870	GTSF1	83	60.625	ENSPANG00000020579	GTSF1	96	60.625	Papio_anubis
ENSLACG00000008870	GTSF1	81	56.688	ENSPSIG00000009968	GTSF1	76	58.065	Pelodiscus_sinensis
ENSLACG00000008870	GTSF1	79	40.000	ENSPSIG00000009839	-	98	40.000	Pelodiscus_sinensis
ENSLACG00000008870	GTSF1	82	61.392	ENSPEMG00000009595	Gtsf1	95	61.392	Peromyscus_maniculatus_bairdii
ENSLACG00000008870	GTSF1	82	60.127	ENSPCIG00000006731	GTSF1	95	60.127	Phascolarctos_cinereus
ENSLACG00000008870	GTSF1	83	60.625	ENSPPYG00000004605	GTSF1	96	60.625	Pongo_abelii
ENSLACG00000008870	GTSF1	82	61.392	ENSPCOG00000016907	-	95	61.392	Propithecus_coquereli
ENSLACG00000008870	GTSF1	84	51.235	ENSPCOG00000015201	-	93	52.632	Propithecus_coquereli
ENSLACG00000008870	GTSF1	82	62.025	ENSPVAG00000000333	GTSF1	95	62.025	Pteropus_vampyrus
ENSLACG00000008870	GTSF1	76	50.676	ENSPNAG00000005737	-	80	50.676	Pygocentrus_nattereri
ENSLACG00000008870	GTSF1	87	57.485	ENSRNOG00000036831	Gtsf1	88	57.485	Rattus_norvegicus
ENSLACG00000008870	GTSF1	83	60.625	ENSRBIG00000043438	-	96	60.625	Rhinopithecus_bieti
ENSLACG00000008870	GTSF1	83	53.750	ENSRBIG00000039916	-	85	53.750	Rhinopithecus_bieti
ENSLACG00000008870	GTSF1	83	60.625	ENSRROG00000008137	GTSF1	96	60.625	Rhinopithecus_roxellana
ENSLACG00000008870	GTSF1	83	60.625	ENSSBOG00000029460	GTSF1	96	60.625	Saimiri_boliviensis_boliviensis
ENSLACG00000008870	GTSF1	82	63.924	ENSSHAG00000011633	GTSF1	95	63.924	Sarcophilus_harrisii
ENSLACG00000008870	GTSF1	62	64.706	ENSSARG00000004928	GTSF1	71	64.706	Sorex_araneus
ENSLACG00000008870	GTSF1	82	48.101	ENSSPUG00000010064	GTSF1	91	65.421	Sphenodon_punctatus
ENSLACG00000008870	GTSF1	82	62.658	ENSSSCG00000026333	GTSF1	95	62.658	Sus_scrofa
ENSLACG00000008870	GTSF1	63	47.967	ENSTGUG00000002008	-	96	47.967	Taeniopygia_guttata
ENSLACG00000008870	GTSF1	82	60.759	ENSTBEG00000006154	GTSF1	98	60.759	Tupaia_belangeri
ENSLACG00000008870	GTSF1	82	60.127	ENSTTRG00000004470	GTSF1	95	60.127	Tursiops_truncatus
ENSLACG00000008870	GTSF1	82	61.392	ENSUAMG00000021669	GTSF1	89	61.688	Ursus_americanus
ENSLACG00000008870	GTSF1	82	61.392	ENSUMAG00000011279	GTSF1	95	61.392	Ursus_maritimus
ENSLACG00000008870	GTSF1	82	60.759	ENSVPAG00000007016	GTSF1	95	60.759	Vicugna_pacos
ENSLACG00000008870	GTSF1	82	61.392	ENSVVUG00000023687	-	80	61.392	Vulpes_vulpes
ENSLACG00000008870	GTSF1	91	51.429	ENSXETG00000033546	gtsf1	75	51.429	Xenopus_tropicalis