EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009001 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: tetratricopeptide repeat domain 31
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 21629 bases
Position: chrJH127146.1:386458-408086
Accession: 102359964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010217	RRM_1	PF00076.22	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010294	-	1323	XM_006000199	ENSLACP00000010217	440 (aa)	-	H3AKP6

Gene Model

Click here to download ENSLACG00000009001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009001	zgc:123010	64	38.602	ENSLACG00000004602	-	72	36.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009001	zgc:123010	88	45.663	ENSAPOG00000001034	-	72	52.508	Acanthochromis_polyacanthus
ENSLACG00000009001	zgc:123010	79	60.111	ENSAPOG00000019633	zgc:123010	68	60.111	Acanthochromis_polyacanthus
ENSLACG00000009001	zgc:123010	78	61.850	ENSACIG00000021684	zgc:123010	88	61.671	Amphilophus_citrinellus
ENSLACG00000009001	zgc:123010	90	35.338	ENSAOCG00000020066	si:dkey-33c12.4	65	35.338	Amphiprion_ocellaris
ENSLACG00000009001	zgc:123010	84	57.552	ENSAOCG00000005910	zgc:123010	68	60.111	Amphiprion_ocellaris
ENSLACG00000009001	zgc:123010	79	59.834	ENSAPEG00000014305	zgc:123010	72	59.834	Amphiprion_percula
ENSLACG00000009001	zgc:123010	71	40.426	ENSATEG00000018885	si:dkey-33c12.4	59	30.990	Anabas_testudineus
ENSLACG00000009001	zgc:123010	81	58.649	ENSATEG00000001220	zgc:123010	86	52.550	Anabas_testudineus
ENSLACG00000009001	zgc:123010	92	48.815	ENSATEG00000022160	-	86	47.253	Anabas_testudineus
ENSLACG00000009001	zgc:123010	95	47.235	ENSACLG00000012346	-	79	48.395	Astatotilapia_calliptera
ENSLACG00000009001	zgc:123010	94	53.226	ENSACLG00000010188	zgc:123010	70	59.229	Astatotilapia_calliptera
ENSLACG00000009001	zgc:123010	99	31.250	ENSAMXG00000010871	si:dkey-33c12.4	63	33.915	Astyanax_mexicanus
ENSLACG00000009001	zgc:123010	85	57.067	ENSAMXG00000041967	zgc:123010	86	52.735	Astyanax_mexicanus
ENSLACG00000009001	zgc:123010	74	39.500	ENSCPBG00000024454	-	53	38.197	Chrysemys_picta_bellii
ENSLACG00000009001	zgc:123010	55	38.372	ENSCSEG00000002755	-	55	36.709	Cynoglossus_semilaevis
ENSLACG00000009001	zgc:123010	57	59.922	ENSCSEG00000006468	zgc:123010	54	50.000	Cynoglossus_semilaevis
ENSLACG00000009001	zgc:123010	79	59.280	ENSCVAG00000013288	zgc:123010	69	59.280	Cyprinodon_variegatus
ENSLACG00000009001	zgc:123010	64	36.620	ENSCVAG00000004187	-	51	36.620	Cyprinodon_variegatus
ENSLACG00000009001	zgc:123010	79	58.739	ENSDARG00000039082	zgc:123010	91	52.715	Danio_rerio
ENSLACG00000009001	zgc:123010	77	34.321	ENSDARG00000057890	si:dkey-33c12.4	77	31.141	Danio_rerio
ENSLACG00000009001	zgc:123010	71	36.000	ENSEBUG00000001368	-	56	38.037	Eptatretus_burgeri
ENSLACG00000009001	zgc:123010	79	58.774	ENSELUG00000022008	zgc:123010	86	56.497	Esox_lucius
ENSLACG00000009001	zgc:123010	77	31.398	ENSELUG00000002009	si:dkey-33c12.4	88	35.897	Esox_lucius
ENSLACG00000009001	zgc:123010	74	37.500	ENSELUG00000001633	-	53	37.500	Esox_lucius
ENSLACG00000009001	zgc:123010	79	54.366	ENSELUG00000021447	-	71	54.366	Esox_lucius
ENSLACG00000009001	zgc:123010	71	36.158	ENSFHEG00000005521	si:dkey-33c12.4	69	34.074	Fundulus_heteroclitus
ENSLACG00000009001	zgc:123010	79	59.053	ENSFHEG00000002306	zgc:123010	86	51.106	Fundulus_heteroclitus
ENSLACG00000009001	zgc:123010	79	57.865	ENSGMOG00000018473	zgc:123010	95	58.708	Gadus_morhua
ENSLACG00000009001	zgc:123010	59	31.419	ENSGALG00000036747	TTC31	62	31.098	Gallus_gallus
ENSLACG00000009001	zgc:123010	66	39.130	ENSGAFG00000017596	si:dkey-33c12.4	53	34.815	Gambusia_affinis
ENSLACG00000009001	zgc:123010	80	58.583	ENSGAFG00000009373	zgc:123010	85	51.209	Gambusia_affinis
ENSLACG00000009001	zgc:123010	71	35.276	ENSGACG00000004936	-	98	35.276	Gasterosteus_aculeatus
ENSLACG00000009001	zgc:123010	79	58.172	ENSGACG00000007620	zgc:123010	95	58.172	Gasterosteus_aculeatus
ENSLACG00000009001	zgc:123010	95	47.575	ENSHBUG00000016720	-	79	48.762	Haplochromis_burtoni
ENSLACG00000009001	zgc:123010	99	30.285	ENSIPUG00000005998	si:dkey-33c12.4	77	30.815	Ictalurus_punctatus
ENSLACG00000009001	zgc:123010	96	53.394	ENSKMAG00000021350	zgc:123010	86	52.328	Kryptolebias_marmoratus
ENSLACG00000009001	zgc:123010	78	52.394	ENSLBEG00000013518	-	70	52.394	Labrus_bergylta
ENSLACG00000009001	zgc:123010	72	34.135	ENSLBEG00000028046	-	51	34.135	Labrus_bergylta
ENSLACG00000009001	zgc:123010	98	52.370	ENSLBEG00000023984	zgc:123010	69	59.944	Labrus_bergylta
ENSLACG00000009001	zgc:123010	71	41.538	ENSLOCG00000001861	-	63	35.381	Lepisosteus_oculatus
ENSLACG00000009001	zgc:123010	79	62.604	ENSLOCG00000008967	zgc:123010	85	55.066	Lepisosteus_oculatus
ENSLACG00000009001	zgc:123010	72	53.583	ENSMAMG00000003439	-	90	53.583	Mastacembelus_armatus
ENSLACG00000009001	zgc:123010	79	59.322	ENSMAMG00000001145	zgc:123010	85	59.322	Mastacembelus_armatus
ENSLACG00000009001	zgc:123010	75	52.226	ENSMAMG00000003394	-	94	52.226	Mastacembelus_armatus
ENSLACG00000009001	zgc:123010	79	54.802	ENSMAMG00000002460	-	89	53.533	Mastacembelus_armatus
ENSLACG00000009001	zgc:123010	79	55.085	ENSMAMG00000002377	-	81	55.271	Mastacembelus_armatus
ENSLACG00000009001	zgc:123010	94	53.226	ENSMZEG00005027733	zgc:123010	70	59.229	Maylandia_zebra
ENSLACG00000009001	zgc:123010	88	47.772	ENSMZEG00005014740	-	99	48.139	Maylandia_zebra
ENSLACG00000009001	zgc:123010	81	55.738	ENSMMOG00000010544	zgc:123010	76	55.738	Mola_mola
ENSLACG00000009001	zgc:123010	78	47.911	ENSMMOG00000017955	-	86	47.911	Mola_mola
ENSLACG00000009001	zgc:123010	69	39.735	ENSMALG00000002265	si:dkey-33c12.4	52	39.053	Monopterus_albus
ENSLACG00000009001	zgc:123010	84	58.031	ENSMALG00000017698	zgc:123010	86	53.084	Monopterus_albus
ENSLACG00000009001	zgc:123010	79	58.543	ENSNBRG00000021157	zgc:123010	80	58.543	Neolamprologus_brichardi
ENSLACG00000009001	zgc:123010	98	51.991	ENSONIG00000018353	zgc:123010	77	55.959	Oreochromis_niloticus
ENSLACG00000009001	zgc:123010	64	52.508	ENSONIG00000000297	-	99	52.508	Oreochromis_niloticus
ENSLACG00000009001	zgc:123010	55	41.071	ENSONIG00000007538	-	97	37.698	Oreochromis_niloticus
ENSLACG00000009001	zgc:123010	67	35.000	ENSONIG00000012263	-	99	34.906	Oreochromis_niloticus
ENSLACG00000009001	zgc:123010	84	50.262	ENSORLG00000007675	zgc:123010	71	54.762	Oryzias_latipes
ENSLACG00000009001	zgc:123010	84	50.000	ENSORLG00020003457	zgc:123010	71	54.464	Oryzias_latipes_hni
ENSLACG00000009001	zgc:123010	94	53.037	ENSORLG00015008373	zgc:123010	85	51.435	Oryzias_latipes_hsok
ENSLACG00000009001	zgc:123010	96	52.511	ENSOMEG00000003408	zgc:123010	69	59.444	Oryzias_melastigma
ENSLACG00000009001	zgc:123010	84	53.316	ENSPKIG00000015521	zgc:123010	94	49.220	Paramormyrops_kingsleyae
ENSLACG00000009001	zgc:123010	99	32.049	ENSPKIG00000011819	-	73	31.237	Paramormyrops_kingsleyae
ENSLACG00000009001	zgc:123010	78	51.695	ENSPMGG00000020251	zgc:123010	85	48.571	Periophthalmus_magnuspinnatus
ENSLACG00000009001	zgc:123010	50	45.333	ENSPMAG00000009352	-	86	43.254	Petromyzon_marinus
ENSLACG00000009001	zgc:123010	63	45.487	ENSPMAG00000004544	zgc:123010	99	45.487	Petromyzon_marinus
ENSLACG00000009001	zgc:123010	88	55.224	ENSPFOG00000001073	zgc:123010	85	52.088	Poecilia_formosa
ENSLACG00000009001	zgc:123010	68	36.170	ENSPFOG00000009143	si:dkey-33c12.4	56	34.074	Poecilia_formosa
ENSLACG00000009001	zgc:123010	61	34.101	ENSPFOG00000017092	-	74	30.447	Poecilia_formosa
ENSLACG00000009001	zgc:123010	68	36.170	ENSPLAG00000022537	si:dkey-33c12.4	58	34.074	Poecilia_latipinna
ENSLACG00000009001	zgc:123010	88	55.224	ENSPLAG00000007711	zgc:123010	85	52.308	Poecilia_latipinna
ENSLACG00000009001	zgc:123010	68	36.170	ENSPMEG00000015590	si:dkey-33c12.4	56	34.074	Poecilia_mexicana
ENSLACG00000009001	zgc:123010	88	55.224	ENSPMEG00000005092	zgc:123010	85	52.088	Poecilia_mexicana
ENSLACG00000009001	zgc:123010	81	57.303	ENSPREG00000019587	zgc:123010	81	57.303	Poecilia_reticulata
ENSLACG00000009001	zgc:123010	96	52.941	ENSPNYG00000007893	zgc:123010	70	59.116	Pundamilia_nyererei
ENSLACG00000009001	zgc:123010	79	49.600	ENSPNYG00000023304	-	87	49.600	Pundamilia_nyererei
ENSLACG00000009001	zgc:123010	77	33.582	ENSPNAG00000018386	si:dkey-33c12.4	63	33.582	Pygocentrus_nattereri
ENSLACG00000009001	zgc:123010	79	59.942	ENSPNAG00000007579	zgc:123010	69	59.942	Pygocentrus_nattereri
ENSLACG00000009001	zgc:123010	84	53.927	ENSSFOG00015021394	zgc:123010	75	56.111	Scleropages_formosus
ENSLACG00000009001	zgc:123010	77	31.951	ENSSFOG00015009199	-	66	32.195	Scleropages_formosus
ENSLACG00000009001	zgc:123010	77	35.121	ENSSFOG00015005186	-	65	34.518	Scleropages_formosus
ENSLACG00000009001	zgc:123010	98	52.000	ENSSMAG00000002904	zgc:123010	91	50.661	Scophthalmus_maximus
ENSLACG00000009001	zgc:123010	80	49.315	ENSSMAG00000021096	-	71	49.315	Scophthalmus_maximus
ENSLACG00000009001	zgc:123010	86	51.128	ENSSDUG00000014026	-	86	47.826	Seriola_dumerili
ENSLACG00000009001	zgc:123010	85	56.701	ENSSDUG00000008651	zgc:123010	86	52.423	Seriola_dumerili
ENSLACG00000009001	zgc:123010	70	40.602	ENSSDUG00000003213	si:dkey-33c12.4	50	40.602	Seriola_dumerili
ENSLACG00000009001	zgc:123010	61	36.709	ENSSDUG00000010976	-	51	36.709	Seriola_dumerili
ENSLACG00000009001	zgc:123010	61	36.709	ENSSLDG00000012846	-	53	36.709	Seriola_lalandi_dorsalis
ENSLACG00000009001	zgc:123010	85	56.701	ENSSLDG00000019386	zgc:123010	86	52.423	Seriola_lalandi_dorsalis
ENSLACG00000009001	zgc:123010	84	57.441	ENSSPAG00000013621	zgc:123010	72	57.441	Stegastes_partitus
ENSLACG00000009001	zgc:123010	88	30.046	ENSTRUG00000000057	-	66	33.427	Takifugu_rubripes
ENSLACG00000009001	zgc:123010	79	56.267	ENSTRUG00000024824	zgc:123010	70	56.267	Takifugu_rubripes
ENSLACG00000009001	zgc:123010	53	36.585	ENSTNIG00000001154	-	98	37.815	Tetraodon_nigroviridis
ENSLACG00000009001	zgc:123010	71	52.744	ENSTNIG00000001303	zgc:123010	99	52.744	Tetraodon_nigroviridis
ENSLACG00000009001	zgc:123010	66	37.884	ENSTNIG00000010542	-	91	37.884	Tetraodon_nigroviridis
ENSLACG00000009001	zgc:123010	65	54.035	ENSXETG00000033896	-	99	54.035	Xenopus_tropicalis
ENSLACG00000009001	zgc:123010	79	57.453	ENSXCOG00000012281	zgc:123010	83	57.453	Xiphophorus_couchianus
ENSLACG00000009001	zgc:123010	80	58.583	ENSXMAG00000002598	zgc:123010	85	51.429	Xiphophorus_maculatus