EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009011 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2707 bases
Position: chrJH128607.1:387113-389819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010231	RVT_1	PF00078.27	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010308	-	1968	-	ENSLACP00000010231	656 (aa)	-	H3AKR0

Gene Model

Click here to download ENSLACG00000009011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009011	-	88	37.708	ENSLACG00000018380	-	100	33.784
ENSLACG00000009011	-	64	44.574	ENSLACG00000002665	-	56	45.038
ENSLACG00000009011	-	75	46.262	ENSLACG00000011272	-	69	46.262
ENSLACG00000009011	-	99	35.549	ENSLACG00000004343	-	90	35.549
ENSLACG00000009011	-	86	34.370	ENSLACG00000008366	-	99	34.370
ENSLACG00000009011	-	73	52.018	ENSLACG00000016980	-	59	52.018
ENSLACG00000009011	-	89	30.964	ENSLACG00000015558	-	89	30.903
ENSLACG00000009011	-	81	38.021	ENSLACG00000002512	-	98	38.021
ENSLACG00000009011	-	98	71.662	ENSLACG00000005007	-	97	74.841
ENSLACG00000009011	-	76	30.040	ENSLACG00000006413	-	77	30.040
ENSLACG00000009011	-	79	33.190	ENSLACG00000007522	-	84	33.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009011	-	86	32.039	ENSATEG00000018698	-	53	31.935	Anabas_testudineus
ENSLACG00000009011	-	90	31.541	ENSACLG00000013947	-	61	31.541	Astatotilapia_calliptera
ENSLACG00000009011	-	71	30.403	ENSAMXG00000033197	-	70	30.403	Astyanax_mexicanus
ENSLACG00000009011	-	85	32.154	ENSAMXG00000032559	-	52	32.154	Astyanax_mexicanus
ENSLACG00000009011	-	84	32.372	ENSAMXG00000038033	-	61	32.372	Astyanax_mexicanus
ENSLACG00000009011	-	66	30.612	ENSAMXG00000043821	-	66	30.612	Astyanax_mexicanus
ENSLACG00000009011	-	94	31.418	ENSCVAG00000020907	-	80	31.418	Cyprinodon_variegatus
ENSLACG00000009011	-	55	34.667	ENSGALG00000044734	-	70	34.667	Gallus_gallus
ENSLACG00000009011	-	55	32.749	ENSGALG00000050454	-	56	32.749	Gallus_gallus
ENSLACG00000009011	-	64	31.613	ENSGAGG00000002613	-	60	31.613	Gopherus_agassizii
ENSLACG00000009011	-	55	30.000	ENSGAGG00000007552	-	60	30.000	Gopherus_agassizii
ENSLACG00000009011	-	95	30.479	ENSKMAG00000022204	-	51	30.479	Kryptolebias_marmoratus
ENSLACG00000009011	-	95	30.479	ENSKMAG00000010491	-	51	30.479	Kryptolebias_marmoratus
ENSLACG00000009011	-	95	30.479	ENSKMAG00000003018	-	51	30.479	Kryptolebias_marmoratus
ENSLACG00000009011	-	98	33.191	ENSLOCG00000009957	-	82	33.191	Lepisosteus_oculatus
ENSLACG00000009011	-	86	30.261	ENSMAMG00000021634	-	95	30.261	Mastacembelus_armatus
ENSLACG00000009011	-	71	32.407	ENSORLG00000025397	-	50	32.407	Oryzias_latipes
ENSLACG00000009011	-	75	33.891	ENSORLG00020016695	-	70	33.891	Oryzias_latipes_hni
ENSLACG00000009011	-	84	30.686	ENSORLG00015000130	-	52	30.686	Oryzias_latipes_hsok
ENSLACG00000009011	-	81	30.403	ENSPKIG00000007924	-	60	30.403	Paramormyrops_kingsleyae
ENSLACG00000009011	-	91	31.081	ENSPKIG00000021090	-	76	31.081	Paramormyrops_kingsleyae
ENSLACG00000009011	-	87	31.034	ENSPKIG00000013293	-	54	31.034	Paramormyrops_kingsleyae
ENSLACG00000009011	-	61	33.446	ENSPSIG00000001614	-	61	33.446	Pelodiscus_sinensis
ENSLACG00000009011	-	77	33.473	ENSPREG00000006122	-	70	33.473	Poecilia_reticulata
ENSLACG00000009011	-	53	30.769	ENSPREG00000006650	-	69	30.769	Poecilia_reticulata
ENSLACG00000009011	-	78	31.159	ENSPREG00000006052	-	50	31.159	Poecilia_reticulata
ENSLACG00000009011	-	85	31.922	ENSSDUG00000010009	-	58	31.922	Seriola_dumerili
ENSLACG00000009011	-	93	31.250	ENSSLDG00000003503	-	63	31.250	Seriola_lalandi_dorsalis
ENSLACG00000009011	-	73	30.256	ENSXMAG00000029360	-	53	30.256	Xiphophorus_maculatus