EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009075 (Gene tree)
Gene ID: 102361351
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 186034 bases
Position: chrJH127011.1:392152-578185
Accession: 102361351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010303	rRNA_proc-arch	PF13234.6	2.2e-89	1	1
ENSLACP00000010303	DEAD	PF00270.29	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010381	MTREX-201	6980	XM_005998438	ENSLACP00000010303	1031 (aa)	XP_005998500	H3AKY2

Gene Model

Click here to download ENSLACG00000009075's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009075	MTREX	100	88.157	ENSG00000039123	MTREX	100	88.602	Homo_sapiens
ENSLACG00000009075	MTREX	100	84.519	ENSAPOG00000007814	mtrex	100	84.423	Acanthochromis_polyacanthus
ENSLACG00000009075	MTREX	100	88.517	ENSAMEG00000013856	MTREX	100	88.517	Ailuropoda_melanoleuca
ENSLACG00000009075	MTREX	100	83.607	ENSACIG00000015117	mtrex	100	83.607	Amphilophus_citrinellus
ENSLACG00000009075	MTREX	100	84.645	ENSAOCG00000011884	mtrex	100	84.645	Amphiprion_ocellaris
ENSLACG00000009075	MTREX	100	84.453	ENSAPEG00000019384	mtrex	100	84.453	Amphiprion_percula
ENSLACG00000009075	MTREX	100	84.402	ENSATEG00000015117	mtrex	100	84.402	Anabas_testudineus
ENSLACG00000009075	MTREX	94	91.546	ENSAPLG00000009694	MTREX	98	91.546	Anas_platyrhynchos
ENSLACG00000009075	MTREX	100	89.337	ENSACAG00000015200	MTREX	96	89.337	Anolis_carolinensis
ENSLACG00000009075	MTREX	100	87.966	ENSANAG00000023095	MTREX	100	88.506	Aotus_nancymaae
ENSLACG00000009075	MTREX	100	84.630	ENSACLG00000001921	mtrex	100	84.630	Astatotilapia_calliptera
ENSLACG00000009075	MTREX	95	86.525	ENSAMXG00000018751	mtrex	99	86.613	Astyanax_mexicanus
ENSLACG00000009075	MTREX	100	88.230	ENSBTAG00000010518	MTREX	100	88.473	Bos_taurus
ENSLACG00000009075	MTREX	92	54.469	WBGene00012342	mtr-4	99	51.988	Caenorhabditis_elegans
ENSLACG00000009075	MTREX	100	87.524	ENSCJAG00000001773	MTREX	100	87.905	Callithrix_jacchus
ENSLACG00000009075	MTREX	100	88.157	ENSCAFG00000006818	MTREX	100	88.410	Canis_familiaris
ENSLACG00000009075	MTREX	100	88.157	ENSCAFG00020024352	MTREX	100	88.410	Canis_lupus_dingo
ENSLACG00000009075	MTREX	100	88.157	ENSCHIG00000024413	MTREX	100	88.399	Capra_hircus
ENSLACG00000009075	MTREX	94	90.664	ENSTSYG00000007389	MTREX	100	90.664	Carlito_syrichta
ENSLACG00000009075	MTREX	97	67.700	ENSCAPG00000008696	MTREX	100	67.700	Cavia_aperea
ENSLACG00000009075	MTREX	100	88.337	ENSCPOG00000009797	MTREX	100	88.697	Cavia_porcellus
ENSLACG00000009075	MTREX	100	87.966	ENSCCAG00000014177	MTREX	100	88.410	Cebus_capucinus
ENSLACG00000009075	MTREX	100	88.157	ENSCATG00000042153	MTREX	100	88.602	Cercocebus_atys
ENSLACG00000009075	MTREX	100	88.061	ENSCLAG00000006622	MTREX	100	88.506	Chinchilla_lanigera
ENSLACG00000009075	MTREX	100	83.905	ENSCSAG00000016445	MTREX	100	84.336	Chlorocebus_sabaeus
ENSLACG00000009075	MTREX	62	97.222	ENSCHOG00000010936	-	70	97.222	Choloepus_hoffmanni
ENSLACG00000009075	MTREX	100	89.672	ENSCPBG00000026551	MTREX	94	90.637	Chrysemys_picta_bellii
ENSLACG00000009075	MTREX	99	67.212	ENSCING00000003239	-	99	66.890	Ciona_intestinalis
ENSLACG00000009075	MTREX	99	66.346	ENSCSAVG00000009304	-	100	70.538	Ciona_savignyi
ENSLACG00000009075	MTREX	100	88.410	ENSCANG00000035770	MTREX	100	88.410	Colobus_angolensis_palliatus
ENSLACG00000009075	MTREX	100	88.325	ENSCGRG00001024680	Mtrex	100	88.782	Cricetulus_griseus_chok1gshd
ENSLACG00000009075	MTREX	100	88.325	ENSCGRG00000000307	Mtrex	100	88.782	Cricetulus_griseus_crigri
ENSLACG00000009075	MTREX	100	83.381	ENSCSEG00000018621	mtrex	98	83.381	Cynoglossus_semilaevis
ENSLACG00000009075	MTREX	100	84.312	ENSCVAG00000004556	mtrex	100	84.297	Cyprinodon_variegatus
ENSLACG00000009075	MTREX	100	87.367	ENSDARG00000013457	mtrex	100	87.367	Danio_rerio
ENSLACG00000009075	MTREX	100	88.073	ENSDNOG00000015375	MTREX	100	88.073	Dasypus_novemcinctus
ENSLACG00000009075	MTREX	100	87.931	ENSDORG00000006782	Mtrex	100	88.314	Dipodomys_ordii
ENSLACG00000009075	MTREX	99	63.138	FBgn0001986	Mtr4	99	63.422	Drosophila_melanogaster
ENSLACG00000009075	MTREX	90	71.781	ENSETEG00000000727	MTREX	90	72.215	Echinops_telfairi
ENSLACG00000009075	MTREX	99	75.388	ENSEBUG00000012869	mtrex	99	75.388	Eptatretus_burgeri
ENSLACG00000009075	MTREX	100	88.410	ENSEASG00005013270	MTREX	100	88.697	Equus_asinus_asinus
ENSLACG00000009075	MTREX	100	88.506	ENSECAG00000023723	MTREX	100	93.981	Equus_caballus
ENSLACG00000009075	MTREX	98	79.902	ENSEEUG00000000527	MTREX	100	80.390	Erinaceus_europaeus
ENSLACG00000009075	MTREX	98	87.757	ENSELUG00000004898	mtrex	100	91.071	Esox_lucius
ENSLACG00000009075	MTREX	100	88.697	ENSFCAG00000010575	MTREX	100	88.697	Felis_catus
ENSLACG00000009075	MTREX	100	87.861	ENSFALG00000010850	MTREX	100	87.958	Ficedula_albicollis
ENSLACG00000009075	MTREX	100	87.896	ENSFDAG00000011199	MTREX	100	87.896	Fukomys_damarensis
ENSLACG00000009075	MTREX	100	84.741	ENSFHEG00000023014	mtrex	100	83.815	Fundulus_heteroclitus
ENSLACG00000009075	MTREX	100	80.829	ENSGMOG00000014702	mtrex	100	81.214	Gadus_morhua
ENSLACG00000009075	MTREX	100	88.910	ENSGALG00000014709	MTREX	86	88.910	Gallus_gallus
ENSLACG00000009075	MTREX	100	84.586	ENSGAFG00000012425	mtrex	100	84.682	Gambusia_affinis
ENSLACG00000009075	MTREX	100	80.172	ENSGACG00000016260	mtrex	96	85.870	Gasterosteus_aculeatus
ENSLACG00000009075	MTREX	100	90.251	ENSGAGG00000020036	MTREX	100	90.541	Gopherus_agassizii
ENSLACG00000009075	MTREX	100	88.157	ENSGGOG00000001867	MTREX	100	88.602	Gorilla_gorilla
ENSLACG00000009075	MTREX	100	84.630	ENSHBUG00000006229	mtrex	100	84.630	Haplochromis_burtoni
ENSLACG00000009075	MTREX	100	88.100	ENSHGLG00000019445	SKIV2L2	100	88.100	Heterocephalus_glaber_female
ENSLACG00000009075	MTREX	100	88.100	ENSHGLG00100011833	SKIV2L2	100	88.100	Heterocephalus_glaber_male
ENSLACG00000009075	MTREX	92	85.438	ENSHCOG00000019995	mtrex	100	85.438	Hippocampus_comes
ENSLACG00000009075	MTREX	100	86.873	ENSIPUG00000024348	skiv2l2	100	86.873	Ictalurus_punctatus
ENSLACG00000009075	MTREX	100	88.634	ENSSTOG00000010802	MTREX	100	88.697	Ictidomys_tridecemlineatus
ENSLACG00000009075	MTREX	100	83.638	ENSJJAG00000020975	Mtrex	100	83.638	Jaculus_jaculus
ENSLACG00000009075	MTREX	100	84.200	ENSKMAG00000012642	mtrex	100	84.200	Kryptolebias_marmoratus
ENSLACG00000009075	MTREX	100	85.000	ENSLBEG00000019367	mtrex	99	86.757	Labrus_bergylta
ENSLACG00000009075	MTREX	100	89.942	ENSLOCG00000010186	mtrex	100	89.942	Lepisosteus_oculatus
ENSLACG00000009075	MTREX	99	86.194	ENSLAFG00000010497	MTREX	100	86.481	Loxodonta_africana
ENSLACG00000009075	MTREX	100	88.157	ENSMFAG00000031610	MTREX	100	88.602	Macaca_fascicularis
ENSLACG00000009075	MTREX	100	87.644	ENSMMUG00000010379	MTREX	100	87.835	Macaca_mulatta
ENSLACG00000009075	MTREX	100	88.157	ENSMNEG00000032746	MTREX	100	88.602	Macaca_nemestrina
ENSLACG00000009075	MTREX	100	88.157	ENSMLEG00000041051	MTREX	100	88.602	Mandrillus_leucophaeus
ENSLACG00000009075	MTREX	100	84.170	ENSMAMG00000016753	mtrex	98	86.774	Mastacembelus_armatus
ENSLACG00000009075	MTREX	100	84.630	ENSMZEG00005000414	mtrex	100	84.630	Maylandia_zebra
ENSLACG00000009075	MTREX	95	65.688	ENSMGAG00000003980	MTREX	99	65.688	Meleagris_gallopavo
ENSLACG00000009075	MTREX	100	88.038	ENSMAUG00000010727	Mtrex	100	88.591	Mesocricetus_auratus
ENSLACG00000009075	MTREX	100	88.443	ENSMICG00000012779	MTREX	100	88.889	Microcebus_murinus
ENSLACG00000009075	MTREX	100	87.691	ENSMOCG00000019886	Mtrex	100	88.230	Microtus_ochrogaster
ENSLACG00000009075	MTREX	100	82.835	ENSMMOG00000002476	mtrex	100	82.835	Mola_mola
ENSLACG00000009075	MTREX	100	88.696	ENSMODG00000019494	MTREX	100	88.889	Monodelphis_domestica
ENSLACG00000009075	MTREX	92	83.368	ENSMALG00000002917	mtrex	98	83.368	Monopterus_albus
ENSLACG00000009075	MTREX	100	87.751	MGP_CAROLIEiJ_G0018896	Mtrex	100	88.184	Mus_caroli
ENSLACG00000009075	MTREX	100	87.847	ENSMUSG00000016018	Mtrex	100	88.280	Mus_musculus
ENSLACG00000009075	MTREX	100	87.656	MGP_PahariEiJ_G0015967	Mtrex	100	88.088	Mus_pahari
ENSLACG00000009075	MTREX	100	87.847	MGP_SPRETEiJ_G0019775	Mtrex	100	88.280	Mus_spretus
ENSLACG00000009075	MTREX	100	88.348	ENSMPUG00000007619	MTREX	100	88.697	Mustela_putorius_furo
ENSLACG00000009075	MTREX	100	88.421	ENSMLUG00000001152	MTREX	100	88.325	Myotis_lucifugus
ENSLACG00000009075	MTREX	100	88.388	ENSNGAG00000011938	Mtrex	100	88.676	Nannospalax_galili
ENSLACG00000009075	MTREX	100	84.726	ENSNBRG00000011293	mtrex	100	84.726	Neolamprologus_brichardi
ENSLACG00000009075	MTREX	100	84.175	ENSNLEG00000001494	MTREX	100	84.608	Nomascus_leucogenys
ENSLACG00000009075	MTREX	83	98.039	ENSMEUG00000006496	-	83	98.039	Notamacropus_eugenii
ENSLACG00000009075	MTREX	100	74.521	ENSOPRG00000008009	MTREX	100	74.808	Ochotona_princeps
ENSLACG00000009075	MTREX	100	87.679	ENSODEG00000017234	MTREX	100	88.123	Octodon_degus
ENSLACG00000009075	MTREX	100	84.793	ENSONIG00000007587	mtrex	100	84.793	Oreochromis_niloticus
ENSLACG00000009075	MTREX	50	88.845	ENSOANG00000004885	-	99	88.845	Ornithorhynchus_anatinus
ENSLACG00000009075	MTREX	100	88.612	ENSOCUG00000004463	MTREX	100	88.964	Oryctolagus_cuniculus
ENSLACG00000009075	MTREX	100	83.158	ENSORLG00000005443	mtrex	100	83.158	Oryzias_latipes
ENSLACG00000009075	MTREX	100	83.062	ENSORLG00020006329	mtrex	100	83.062	Oryzias_latipes_hni
ENSLACG00000009075	MTREX	100	83.189	ENSORLG00015012924	mtrex	100	83.062	Oryzias_latipes_hsok
ENSLACG00000009075	MTREX	100	82.901	ENSOMEG00000008825	mtrex	100	82.901	Oryzias_melastigma
ENSLACG00000009075	MTREX	100	88.157	ENSOGAG00000002886	MTREX	100	88.591	Otolemur_garnettii
ENSLACG00000009075	MTREX	100	87.905	ENSOARG00000007764	MTREX	100	88.145	Ovis_aries
ENSLACG00000009075	MTREX	100	88.061	ENSPPAG00000039291	MTREX	100	88.506	Pan_paniscus
ENSLACG00000009075	MTREX	100	88.697	ENSPPRG00000019701	MTREX	100	88.697	Panthera_pardus
ENSLACG00000009075	MTREX	100	87.261	ENSPTIG00000009313	MTREX	100	87.261	Panthera_tigris_altaica
ENSLACG00000009075	MTREX	100	88.061	ENSPTRG00000016878	MTREX	100	88.506	Pan_troglodytes
ENSLACG00000009075	MTREX	100	88.061	ENSPANG00000009697	MTREX	100	88.506	Papio_anubis
ENSLACG00000009075	MTREX	100	87.548	ENSPKIG00000020833	mtrex	100	87.548	Paramormyrops_kingsleyae
ENSLACG00000009075	MTREX	100	89.652	ENSPSIG00000012150	MTREX	100	90.426	Pelodiscus_sinensis
ENSLACG00000009075	MTREX	100	82.579	ENSPMGG00000002582	mtrex	100	82.579	Periophthalmus_magnuspinnatus
ENSLACG00000009075	MTREX	95	67.003	ENSPMAG00000009668	mtrex	100	67.003	Petromyzon_marinus
ENSLACG00000009075	MTREX	92	92.503	ENSPCIG00000024730	MTREX	100	92.503	Phascolarctos_cinereus
ENSLACG00000009075	MTREX	76	87.579	ENSPFOG00000003141	mtrex	100	87.944	Poecilia_formosa
ENSLACG00000009075	MTREX	100	84.630	ENSPLAG00000021311	mtrex	100	84.712	Poecilia_latipinna
ENSLACG00000009075	MTREX	92	88.353	ENSPMEG00000010597	mtrex	99	88.458	Poecilia_mexicana
ENSLACG00000009075	MTREX	100	84.534	ENSPREG00000003089	mtrex	100	84.615	Poecilia_reticulata
ENSLACG00000009075	MTREX	98	88.058	ENSPPYG00000015469	MTREX	98	88.510	Pongo_abelii
ENSLACG00000009075	MTREX	94	77.674	ENSPCAG00000013120	MTREX	94	77.674	Procavia_capensis
ENSLACG00000009075	MTREX	99	82.704	ENSPCOG00000018092	MTREX	100	83.176	Propithecus_coquereli
ENSLACG00000009075	MTREX	100	88.061	ENSPVAG00000002445	MTREX	100	88.410	Pteropus_vampyrus
ENSLACG00000009075	MTREX	100	84.534	ENSPNYG00000006164	mtrex	100	84.534	Pundamilia_nyererei
ENSLACG00000009075	MTREX	100	87.367	ENSPNAG00000008794	mtrex	100	87.367	Pygocentrus_nattereri
ENSLACG00000009075	MTREX	99	87.115	ENSRNOG00000010125	Mtrex	97	87.404	Rattus_norvegicus
ENSLACG00000009075	MTREX	100	86.437	ENSRBIG00000034930	MTREX	100	86.877	Rhinopithecus_bieti
ENSLACG00000009075	MTREX	100	88.061	ENSRROG00000039895	MTREX	100	88.506	Rhinopithecus_roxellana
ENSLACG00000009075	MTREX	94	54.564	YJL050W	MTR4	99	52.288	Saccharomyces_cerevisiae
ENSLACG00000009075	MTREX	100	87.870	ENSSBOG00000026693	MTREX	98	90.490	Saimiri_boliviensis_boliviensis
ENSLACG00000009075	MTREX	96	90.679	ENSSHAG00000004600	MTREX	99	90.679	Sarcophilus_harrisii
ENSLACG00000009075	MTREX	100	88.889	ENSSFOG00015014355	skiv2l2	100	88.889	Scleropages_formosus
ENSLACG00000009075	MTREX	100	84.231	ENSSMAG00000007572	mtrex	100	84.231	Scophthalmus_maximus
ENSLACG00000009075	MTREX	100	84.822	ENSSDUG00000023789	mtrex	100	84.822	Seriola_dumerili
ENSLACG00000009075	MTREX	100	84.630	ENSSLDG00000006301	mtrex	100	84.630	Seriola_lalandi_dorsalis
ENSLACG00000009075	MTREX	100	86.948	ENSSARG00000008387	MTREX	100	87.236	Sorex_araneus
ENSLACG00000009075	MTREX	100	79.014	ENSSPUG00000007071	MTREX	100	79.014	Sphenodon_punctatus
ENSLACG00000009075	MTREX	100	83.253	ENSSPAG00000011319	mtrex	100	83.640	Stegastes_partitus
ENSLACG00000009075	MTREX	100	88.443	ENSSSCG00000016911	MTREX	100	88.793	Sus_scrofa
ENSLACG00000009075	MTREX	100	87.283	ENSTGUG00000002480	MTREX	100	87.283	Taeniopygia_guttata
ENSLACG00000009075	MTREX	100	83.719	ENSTRUG00000014571	mtrex	100	83.719	Takifugu_rubripes
ENSLACG00000009075	MTREX	100	72.970	ENSTBEG00000007769	MTREX	100	73.372	Tupaia_belangeri
ENSLACG00000009075	MTREX	100	88.038	ENSTTRG00000008678	MTREX	100	88.088	Tursiops_truncatus
ENSLACG00000009075	MTREX	100	88.061	ENSUAMG00000023061	MTREX	100	88.495	Ursus_americanus
ENSLACG00000009075	MTREX	100	87.703	ENSUMAG00000009373	MTREX	99	93.563	Ursus_maritimus
ENSLACG00000009075	MTREX	100	78.736	ENSVPAG00000011174	MTREX	100	78.736	Vicugna_pacos
ENSLACG00000009075	MTREX	100	88.252	ENSVVUG00000021337	MTREX	100	88.602	Vulpes_vulpes
ENSLACG00000009075	MTREX	100	90.154	ENSXETG00000032798	MTREX	100	90.154	Xenopus_tropicalis
ENSLACG00000009075	MTREX	100	85.207	ENSXMAG00000004799	mtrex	100	85.385	Xiphophorus_maculatus