EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009107 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 3967 bases
Position: chrJH128110.1:394540-398506
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010341	PARP	PF00644.20	9.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010419	-	591	-	ENSLACP00000010341	197 (aa)	-	H3AL20

Gene Model

Click here to download ENSLACG00000009107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009107	-	96	35.211	ENSLACG00000016902	PARP11	63	35.211
ENSLACG00000009107	-	59	47.541	ENSLACG00000000311	-	98	47.541
ENSLACG00000009107	-	97	72.680	ENSLACG00000008565	-	63	72.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009107	-	77	44.654	ENSAPOG00000007412	-	59	44.654	Acanthochromis_polyacanthus
ENSLACG00000009107	-	96	46.667	ENSACIG00000020176	-	70	46.667	Amphilophus_citrinellus
ENSLACG00000009107	-	98	41.791	ENSACIG00000003944	si:ch211-219a4.3	53	41.791	Amphilophus_citrinellus
ENSLACG00000009107	-	99	43.350	ENSACIG00000009927	-	98	43.350	Amphilophus_citrinellus
ENSLACG00000009107	-	97	43.216	ENSACIG00000009912	-	62	43.216	Amphilophus_citrinellus
ENSLACG00000009107	-	89	41.989	ENSAOCG00000002980	-	58	41.989	Amphiprion_ocellaris
ENSLACG00000009107	-	97	42.211	ENSACLG00000013093	-	60	42.211	Astatotilapia_calliptera
ENSLACG00000009107	-	95	37.949	ENSACLG00000005418	-	54	40.805	Astatotilapia_calliptera
ENSLACG00000009107	-	95	41.026	ENSACLG00000013170	-	89	41.026	Astatotilapia_calliptera
ENSLACG00000009107	-	91	48.370	ENSCSEG00000020071	-	53	48.370	Cynoglossus_semilaevis
ENSLACG00000009107	-	96	40.722	ENSCSEG00000017936	si:ch211-219a4.3	50	40.722	Cynoglossus_semilaevis
ENSLACG00000009107	-	95	45.596	ENSCVAG00000017520	-	82	45.596	Cyprinodon_variegatus
ENSLACG00000009107	-	97	40.201	ENSCVAG00000014329	-	62	40.201	Cyprinodon_variegatus
ENSLACG00000009107	-	96	45.408	ENSFHEG00000008820	-	86	45.408	Fundulus_heteroclitus
ENSLACG00000009107	-	98	39.904	ENSGMOG00000011231	-	61	40.594	Gadus_morhua
ENSLACG00000009107	-	97	42.211	ENSGAFG00000002533	-	63	42.211	Gambusia_affinis
ENSLACG00000009107	-	96	46.154	ENSGAFG00000001814	-	52	47.179	Gambusia_affinis
ENSLACG00000009107	-	98	40.000	ENSHBUG00000005369	-	58	40.000	Haplochromis_burtoni
ENSLACG00000009107	-	93	42.857	ENSKMAG00000012870	-	57	42.857	Kryptolebias_marmoratus
ENSLACG00000009107	-	93	42.328	ENSKMAG00000003908	-	61	42.328	Kryptolebias_marmoratus
ENSLACG00000009107	-	99	44.335	ENSMZEG00005026601	-	70	44.335	Maylandia_zebra
ENSLACG00000009107	-	98	41.294	ENSMZEG00005025678	si:ch211-219a4.3	57	41.294	Maylandia_zebra
ENSLACG00000009107	-	95	39.896	ENSMODG00000007157	-	62	39.896	Monodelphis_domestica
ENSLACG00000009107	-	76	46.405	ENSMALG00000017146	-	76	46.405	Monopterus_albus
ENSLACG00000009107	-	85	39.535	ENSMALG00000000434	-	84	39.535	Monopterus_albus
ENSLACG00000009107	-	89	43.478	ENSNBRG00000004048	-	96	43.478	Neolamprologus_brichardi
ENSLACG00000009107	-	93	45.312	ENSNBRG00000004017	-	89	45.312	Neolamprologus_brichardi
ENSLACG00000009107	-	97	43.719	ENSNBRG00000003877	-	67	43.719	Neolamprologus_brichardi
ENSLACG00000009107	-	83	46.471	ENSONIG00000017776	-	50	46.471	Oreochromis_niloticus
ENSLACG00000009107	-	95	40.513	ENSORLG00015021971	si:ch211-219a4.3	55	40.513	Oryzias_latipes_hsok
ENSLACG00000009107	-	97	43.500	ENSORLG00015003387	-	58	43.500	Oryzias_latipes_hsok
ENSLACG00000009107	-	96	43.939	ENSOMEG00000016408	-	60	43.939	Oryzias_melastigma
ENSLACG00000009107	-	97	45.000	ENSOMEG00000016380	-	58	45.000	Oryzias_melastigma
ENSLACG00000009107	-	85	47.701	ENSOMEG00000016369	-	54	47.701	Oryzias_melastigma
ENSLACG00000009107	-	97	45.000	ENSOMEG00000016395	-	62	45.000	Oryzias_melastigma
ENSLACG00000009107	-	95	45.361	ENSPKIG00000004135	-	55	45.361	Paramormyrops_kingsleyae
ENSLACG00000009107	-	99	47.264	ENSPMGG00000004482	-	51	46.073	Periophthalmus_magnuspinnatus
ENSLACG00000009107	-	96	35.751	ENSPMGG00000017987	-	90	35.751	Periophthalmus_magnuspinnatus
ENSLACG00000009107	-	95	38.974	ENSPFOG00000021893	-	50	38.974	Poecilia_formosa
ENSLACG00000009107	-	95	45.596	ENSPLAG00000023515	-	68	45.596	Poecilia_latipinna
ENSLACG00000009107	-	90	41.530	ENSPLAG00000004362	-	65	41.530	Poecilia_latipinna
ENSLACG00000009107	-	95	45.596	ENSPMEG00000004356	-	68	45.596	Poecilia_mexicana
ENSLACG00000009107	-	97	41.709	ENSPREG00000003560	-	61	41.709	Poecilia_reticulata
ENSLACG00000009107	-	95	44.560	ENSPREG00000007470	-	90	44.199	Poecilia_reticulata
ENSLACG00000009107	-	97	41.709	ENSPNYG00000021303	-	62	41.709	Pundamilia_nyererei
ENSLACG00000009107	-	98	40.796	ENSPNYG00000013937	-	57	40.796	Pundamilia_nyererei
ENSLACG00000009107	-	97	44.724	ENSPNYG00000021378	-	61	44.724	Pundamilia_nyererei
ENSLACG00000009107	-	95	43.147	ENSSFOG00015001605	-	67	43.147	Scleropages_formosus
ENSLACG00000009107	-	96	46.701	ENSSLDG00000005960	-	54	46.701	Seriola_lalandi_dorsalis
ENSLACG00000009107	-	95	41.538	ENSTRUG00000004579	-	56	41.538	Takifugu_rubripes
ENSLACG00000009107	-	98	42.714	ENSUAMG00000004120	-	52	42.714	Ursus_americanus
ENSLACG00000009107	-	95	44.615	ENSXETG00000010161	parp14.3	65	44.615	Xenopus_tropicalis
ENSLACG00000009107	-	95	36.923	ENSXCOG00000014707	-	54	36.923	Xiphophorus_couchianus
ENSLACG00000009107	-	83	34.940	ENSXCOG00000014714	-	79	34.940	Xiphophorus_couchianus
ENSLACG00000009107	-	94	42.105	ENSXMAG00000010352	-	82	42.105	Xiphophorus_maculatus