EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009128 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 4428 bases
Position: chrJH128645.1:396375-400802
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010363	RVT_1	PF00078.27	4.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010442	-	1008	-	ENSLACP00000010363	336 (aa)	-	H3AL42

Gene Model

Click here to download ENSLACG00000009128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009128	-	53	30.319	ENSLACG00000007362	-	81	30.319
ENSLACG00000009128	-	54	33.155	ENSLACG00000016335	-	100	33.155
ENSLACG00000009128	-	60	33.816	ENSLACG00000010360	-	63	33.816
ENSLACG00000009128	-	75	30.268	ENSLACG00000006232	-	73	30.268
ENSLACG00000009128	-	76	30.888	ENSLACG00000014709	-	66	30.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009128	-	76	40.154	ENSAPOG00000010356	-	69	40.154	Acanthochromis_polyacanthus
ENSLACG00000009128	-	76	30.651	ENSAPEG00000017357	-	58	30.651	Amphiprion_percula
ENSLACG00000009128	-	77	37.643	ENSAPEG00000001652	-	72	37.643	Amphiprion_percula
ENSLACG00000009128	-	74	54.400	ENSATEG00000004181	-	81	54.400	Anabas_testudineus
ENSLACG00000009128	-	80	36.861	ENSACLG00000009990	-	73	36.861	Astatotilapia_calliptera
ENSLACG00000009128	-	81	36.462	ENSACLG00000000577	-	52	36.462	Astatotilapia_calliptera
ENSLACG00000009128	-	81	37.545	ENSACLG00000021049	-	74	37.545	Astatotilapia_calliptera
ENSLACG00000009128	-	70	38.075	ENSEBUG00000003807	-	91	38.075	Eptatretus_burgeri
ENSLACG00000009128	-	81	34.420	ENSHBUG00000016469	-	78	34.420	Haplochromis_burtoni
ENSLACG00000009128	-	76	31.955	ENSHCOG00000002713	-	66	31.955	Hippocampus_comes
ENSLACG00000009128	-	80	35.424	ENSIPUG00000022680	-	62	35.424	Ictalurus_punctatus
ENSLACG00000009128	-	50	39.181	ENSIPUG00000006522	-	55	39.181	Ictalurus_punctatus
ENSLACG00000009128	-	76	38.697	ENSMZEG00005001407	-	74	38.697	Maylandia_zebra
ENSLACG00000009128	-	81	37.184	ENSMZEG00005027054	-	95	37.184	Maylandia_zebra
ENSLACG00000009128	-	75	39.062	ENSMZEG00005004417	-	69	39.062	Maylandia_zebra
ENSLACG00000009128	-	81	36.364	ENSMALG00000007492	-	67	36.364	Monopterus_albus
ENSLACG00000009128	-	71	33.200	ENSNBRG00000002521	-	64	33.200	Neolamprologus_brichardi
ENSLACG00000009128	-	82	36.429	ENSORLG00000015190	-	58	36.429	Oryzias_latipes
ENSLACG00000009128	-	75	38.521	ENSORLG00000029682	-	74	38.521	Oryzias_latipes
ENSLACG00000009128	-	76	38.462	ENSORLG00020012943	-	72	38.462	Oryzias_latipes_hni
ENSLACG00000009128	-	76	32.707	ENSORLG00015011564	-	53	32.707	Oryzias_latipes_hsok
ENSLACG00000009128	-	82	35.125	ENSORLG00015001080	-	68	35.125	Oryzias_latipes_hsok
ENSLACG00000009128	-	75	34.749	ENSPKIG00000022569	-	69	34.749	Paramormyrops_kingsleyae
ENSLACG00000009128	-	77	35.556	ENSPKIG00000021701	-	55	35.556	Paramormyrops_kingsleyae
ENSLACG00000009128	-	76	33.460	ENSPSIG00000001099	-	64	33.460	Pelodiscus_sinensis
ENSLACG00000009128	-	62	41.429	ENSPNYG00000007962	-	62	41.429	Pundamilia_nyererei
ENSLACG00000009128	-	58	55.612	ENSPNAG00000018609	-	50	55.612	Pygocentrus_nattereri
ENSLACG00000009128	-	71	54.583	ENSPNAG00000013035	-	82	54.583	Pygocentrus_nattereri
ENSLACG00000009128	-	79	52.830	ENSPNAG00000002794	-	67	52.830	Pygocentrus_nattereri
ENSLACG00000009128	-	63	33.488	ENSPNAG00000021600	-	69	33.488	Pygocentrus_nattereri
ENSLACG00000009128	-	58	57.653	ENSPNAG00000009857	-	57	57.653	Pygocentrus_nattereri
ENSLACG00000009128	-	77	35.094	ENSSFOG00015012021	-	73	35.094	Scleropages_formosus
ENSLACG00000009128	-	80	37.638	ENSSMAG00000002801	-	57	37.638	Scophthalmus_maximus
ENSLACG00000009128	-	77	38.258	ENSXMAG00000028373	-	83	38.258	Xiphophorus_maculatus
ENSLACG00000009128	-	65	40.090	ENSXMAG00000021563	-	70	40.090	Xiphophorus_maculatus