EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009168 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 4370 bases
Position: chrJH127987.1:399761-404130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010408	RVT_1	PF00078.27	6.3e-19	1	1
ENSLACP00000010407	RVT_1	PF00078.27	8.4e-19	1	1
ENSLACP00000010406	RVT_1	PF00078.27	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010487	-	1797	-	ENSLACP00000010408	599 (aa)	-	H3AL87
ENSLACT00000010486	-	1833	-	ENSLACP00000010407	611 (aa)	-	H3AL86
ENSLACT00000010485	-	2511	-	ENSLACP00000010406	837 (aa)	-	H3AL85

Gene Model

Click here to download ENSLACG00000009168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009168	-	66	36.117	ENSLACG00000010367	-	56	39.474
ENSLACG00000009168	-	89	33.731	ENSLACG00000007131	-	72	37.973
ENSLACG00000009168	-	88	41.003	ENSLACG00000001186	-	100	41.003
ENSLACG00000009168	-	93	37.264	ENSLACG00000010862	-	86	37.264
ENSLACG00000009168	-	96	37.785	ENSLACG00000016284	-	99	49.545
ENSLACG00000009168	-	82	46.667	ENSLACG00000010776	-	95	39.464
ENSLACG00000009168	-	92	41.256	ENSLACG00000003314	-	61	43.020
ENSLACG00000009168	-	78	32.201	ENSLACG00000008355	-	99	32.201
ENSLACG00000009168	-	87	35.846	ENSLACG00000002169	-	88	41.606
ENSLACG00000009168	-	92	31.624	ENSLACG00000014947	-	63	31.624
ENSLACG00000009168	-	98	39.748	ENSLACG00000017143	-	100	39.748
ENSLACG00000009168	-	67	30.464	ENSLACG00000003991	-	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009168	-	54	32.520	ENSAOCG00000003030	-	50	36.585	Amphiprion_ocellaris
ENSLACG00000009168	-	66	31.707	ENSAPEG00000014936	-	59	32.236	Amphiprion_percula
ENSLACG00000009168	-	50	31.473	ENSAPEG00000006765	-	68	31.473	Amphiprion_percula
ENSLACG00000009168	-	86	32.409	ENSATEG00000008091	-	53	32.539	Anabas_testudineus
ENSLACG00000009168	-	86	32.470	ENSATEG00000019692	-	64	32.773	Anabas_testudineus
ENSLACG00000009168	-	64	35.714	ENSACLG00000005526	-	51	35.714	Astatotilapia_calliptera
ENSLACG00000009168	-	85	32.123	ENSACLG00000007712	-	92	32.123	Astatotilapia_calliptera
ENSLACG00000009168	-	61	30.476	ENSACLG00000013847	-	94	33.333	Astatotilapia_calliptera
ENSLACG00000009168	-	90	32.000	ENSACLG00000004561	-	69	32.486	Astatotilapia_calliptera
ENSLACG00000009168	-	64	31.628	ENSACLG00000014740	-	50	35.814	Astatotilapia_calliptera
ENSLACG00000009168	-	71	32.068	ENSACLG00000001380	-	79	34.249	Astatotilapia_calliptera
ENSLACG00000009168	-	57	30.616	ENSACLG00000009861	-	100	31.138	Astatotilapia_calliptera
ENSLACG00000009168	-	56	33.333	ENSAMXG00000040471	-	71	32.196	Astyanax_mexicanus
ENSLACG00000009168	-	50	30.580	ENSAMXG00000038480	-	62	30.580	Astyanax_mexicanus
ENSLACG00000009168	-	53	30.753	ENSAMXG00000030761	-	62	30.753	Astyanax_mexicanus
ENSLACG00000009168	-	86	32.750	ENSAMXG00000032571	-	52	32.184	Astyanax_mexicanus
ENSLACG00000009168	-	61	35.252	ENSAMXG00000038502	-	83	39.329	Astyanax_mexicanus
ENSLACG00000009168	-	57	31.620	ENSAMXG00000039106	-	75	34.190	Astyanax_mexicanus
ENSLACG00000009168	-	67	40.308	ENSAMXG00000043469	-	98	44.493	Astyanax_mexicanus
ENSLACG00000009168	-	52	32.591	ENSAMXG00000031032	-	95	35.933	Astyanax_mexicanus
ENSLACG00000009168	-	53	30.753	ENSAMXG00000043631	-	57	30.753	Astyanax_mexicanus
ENSLACG00000009168	-	66	32.511	ENSCPBG00000001119	-	97	35.570	Chrysemys_picta_bellii
ENSLACG00000009168	-	93	48.908	ENSCSEG00000010442	-	88	48.908	Cynoglossus_semilaevis
ENSLACG00000009168	-	89	40.986	ENSCVAG00000019870	-	93	42.671	Cyprinodon_variegatus
ENSLACG00000009168	-	55	32.292	ENSELUG00000022230	-	60	32.292	Esox_lucius
ENSLACG00000009168	-	90	39.160	ENSGAGG00000007173	-	100	42.031	Gopherus_agassizii
ENSLACG00000009168	-	70	40.135	ENSGAGG00000011063	-	100	43.505	Gopherus_agassizii
ENSLACG00000009168	-	50	31.469	ENSGAGG00000013650	-	75	31.469	Gopherus_agassizii
ENSLACG00000009168	-	91	39.101	ENSGAGG00000022002	-	83	41.810	Gopherus_agassizii
ENSLACG00000009168	-	64	32.028	ENSGAGG00000002613	-	58	33.871	Gopherus_agassizii
ENSLACG00000009168	-	71	41.372	ENSHCOG00000019997	-	96	44.403	Hippocampus_comes
ENSLACG00000009168	-	73	40.289	ENSIPUG00000003645	-	99	43.802	Ictalurus_punctatus
ENSLACG00000009168	-	89	32.269	ENSKMAG00000013568	-	92	31.250	Kryptolebias_marmoratus
ENSLACG00000009168	-	71	31.352	ENSKMAG00000007574	-	95	34.016	Kryptolebias_marmoratus
ENSLACG00000009168	-	99	30.091	ENSKMAG00000003188	-	92	30.091	Kryptolebias_marmoratus
ENSLACG00000009168	-	51	32.386	ENSLBEG00000003912	-	90	36.648	Labrus_bergylta
ENSLACG00000009168	-	88	45.156	ENSMAMG00000019918	-	99	47.438	Mastacembelus_armatus
ENSLACG00000009168	-	71	30.952	ENSMAMG00000016004	-	74	30.140	Mastacembelus_armatus
ENSLACG00000009168	-	73	30.533	ENSMZEG00005024252	-	65	32.000	Maylandia_zebra
ENSLACG00000009168	-	67	37.654	ENSMZEG00005017878	-	72	32.640	Maylandia_zebra
ENSLACG00000009168	-	57	30.815	ENSMZEG00005023829	-	100	31.337	Maylandia_zebra
ENSLACG00000009168	-	64	35.714	ENSMZEG00005004899	-	52	35.714	Maylandia_zebra
ENSLACG00000009168	-	66	30.045	ENSMZEG00005008378	-	64	33.264	Maylandia_zebra
ENSLACG00000009168	-	91	31.086	ENSORLG00000028879	-	63	33.882	Oryzias_latipes
ENSLACG00000009168	-	69	32.969	ENSORLG00000027869	-	98	37.037	Oryzias_latipes
ENSLACG00000009168	-	87	31.661	ENSORLG00000027590	-	53	30.889	Oryzias_latipes
ENSLACG00000009168	-	86	31.349	ENSORLG00000023375	-	53	31.660	Oryzias_latipes
ENSLACG00000009168	-	69	32.900	ENSORLG00000027231	-	87	36.580	Oryzias_latipes
ENSLACG00000009168	-	71	32.432	ENSORLG00000027443	-	87	35.019	Oryzias_latipes
ENSLACG00000009168	-	89	30.151	ENSORLG00000026053	-	53	30.210	Oryzias_latipes
ENSLACG00000009168	-	86	32.635	ENSORLG00000024164	-	53	32.587	Oryzias_latipes
ENSLACG00000009168	-	91	31.086	ENSORLG00000028266	-	53	31.077	Oryzias_latipes
ENSLACG00000009168	-	69	33.117	ENSORLG00000026235	-	60	32.753	Oryzias_latipes
ENSLACG00000009168	-	89	30.486	ENSORLG00000028233	-	53	30.490	Oryzias_latipes
ENSLACG00000009168	-	86	32.286	ENSORLG00000022583	-	53	32.308	Oryzias_latipes
ENSLACG00000009168	-	51	35.112	ENSORLG00020012706	-	89	40.169	Oryzias_latipes_hni
ENSLACG00000009168	-	87	31.122	ENSORLG00020002002	-	90	34.694	Oryzias_latipes_hni
ENSLACG00000009168	-	69	31.739	ENSORLG00020009401	-	56	31.661	Oryzias_latipes_hni
ENSLACG00000009168	-	82	30.714	ENSORLG00020019030	-	84	31.825	Oryzias_latipes_hni
ENSLACG00000009168	-	75	31.434	ENSORLG00020000592	-	59	34.510	Oryzias_latipes_hni
ENSLACG00000009168	-	85	34.877	ENSORLG00020014981	-	53	31.461	Oryzias_latipes_hni
ENSLACG00000009168	-	52	35.556	ENSORLG00020000154	-	88	40.556	Oryzias_latipes_hni
ENSLACG00000009168	-	52	31.498	ENSORLG00020001433	-	55	31.971	Oryzias_latipes_hni
ENSLACG00000009168	-	74	33.000	ENSORLG00020009084	-	67	35.400	Oryzias_latipes_hni
ENSLACG00000009168	-	90	31.063	ENSORLG00020021465	-	56	31.232	Oryzias_latipes_hni
ENSLACG00000009168	-	59	33.167	ENSORLG00020016924	-	94	36.908	Oryzias_latipes_hni
ENSLACG00000009168	-	63	35.036	ENSORLG00020009127	-	83	36.891	Oryzias_latipes_hni
ENSLACG00000009168	-	86	31.349	ENSORLG00020012971	-	58	31.461	Oryzias_latipes_hni
ENSLACG00000009168	-	55	30.388	ENSORLG00015017579	-	54	30.388	Oryzias_latipes_hsok
ENSLACG00000009168	-	87	31.542	ENSORLG00015003846	-	73	31.127	Oryzias_latipes_hsok
ENSLACG00000009168	-	64	30.269	ENSORLG00015010510	-	71	34.305	Oryzias_latipes_hsok
ENSLACG00000009168	-	82	30.714	ENSORLG00015017997	-	70	31.825	Oryzias_latipes_hsok
ENSLACG00000009168	-	73	31.951	ENSORLG00015022314	-	74	31.951	Oryzias_latipes_hsok
ENSLACG00000009168	-	52	35.180	ENSORLG00015021822	-	97	40.270	Oryzias_latipes_hsok
ENSLACG00000009168	-	59	30.380	ENSORLG00015013109	-	63	34.684	Oryzias_latipes_hsok
ENSLACG00000009168	-	68	31.579	ENSORLG00015008138	-	85	35.948	Oryzias_latipes_hsok
ENSLACG00000009168	-	60	33.661	ENSORLG00015009803	-	96	36.207	Oryzias_latipes_hsok
ENSLACG00000009168	-	97	30.284	ENSORLG00015013369	-	77	33.828	Oryzias_latipes_hsok
ENSLACG00000009168	-	76	32.708	ENSOMEG00000013437	-	94	34.608	Oryzias_melastigma
ENSLACG00000009168	-	69	31.808	ENSOMEG00000013073	-	91	31.754	Oryzias_melastigma
ENSLACG00000009168	-	91	38.693	ENSOMEG00000005634	-	93	39.620	Oryzias_melastigma
ENSLACG00000009168	-	59	31.841	ENSOMEG00000013479	-	64	36.070	Oryzias_melastigma
ENSLACG00000009168	-	99	31.175	ENSOMEG00000017295	-	68	33.286	Oryzias_melastigma
ENSLACG00000009168	-	61	32.048	ENSPKIG00000007140	-	93	36.386	Paramormyrops_kingsleyae
ENSLACG00000009168	-	88	32.657	ENSPKIG00000006845	-	67	32.887	Paramormyrops_kingsleyae
ENSLACG00000009168	-	73	52.759	ENSPKIG00000015048	-	96	44.200	Paramormyrops_kingsleyae
ENSLACG00000009168	-	87	30.662	ENSPKIG00000016590	-	55	30.411	Paramormyrops_kingsleyae
ENSLACG00000009168	-	89	41.809	ENSPKIG00000013778	-	88	42.980	Paramormyrops_kingsleyae
ENSLACG00000009168	-	78	39.139	ENSPKIG00000005406	-	100	39.901	Paramormyrops_kingsleyae
ENSLACG00000009168	-	61	30.657	ENSPSIG00000001757	-	99	34.063	Pelodiscus_sinensis
ENSLACG00000009168	-	55	31.624	ENSPSIG00000000367	-	92	31.961	Pelodiscus_sinensis
ENSLACG00000009168	-	61	32.367	ENSPSIG00000001197	-	100	35.749	Pelodiscus_sinensis
ENSLACG00000009168	-	56	42.939	ENSPSIG00000000007	-	90	43.855	Pelodiscus_sinensis
ENSLACG00000009168	-	61	31.566	ENSPSIG00000001205	-	88	34.699	Pelodiscus_sinensis
ENSLACG00000009168	-	61	30.657	ENSPSIG00000000193	-	80	34.307	Pelodiscus_sinensis
ENSLACG00000009168	-	65	30.752	ENSPSIG00000001614	-	65	33.843	Pelodiscus_sinensis
ENSLACG00000009168	-	55	33.120	ENSPSIG00000001150	-	62	33.120	Pelodiscus_sinensis
ENSLACG00000009168	-	52	33.426	ENSPSIG00000001800	-	80	37.604	Pelodiscus_sinensis
ENSLACG00000009168	-	84	43.761	ENSPMEG00000017235	-	90	43.761	Poecilia_mexicana
ENSLACG00000009168	-	55	34.656	ENSPMEG00000018862	-	75	39.153	Poecilia_mexicana
ENSLACG00000009168	-	60	37.681	ENSPMEG00000019465	-	92	41.787	Poecilia_mexicana
ENSLACG00000009168	-	93	31.029	ENSPMEG00000005690	-	70	31.072	Poecilia_mexicana
ENSLACG00000009168	-	65	30.413	ENSPREG00000006122	-	78	30.413	Poecilia_reticulata
ENSLACG00000009168	-	54	38.728	ENSPREG00000022349	-	83	39.062	Poecilia_reticulata
ENSLACG00000009168	-	54	30.909	ENSPREG00000006496	-	52	34.536	Poecilia_reticulata
ENSLACG00000009168	-	69	44.635	ENSPNAG00000010299	-	92	49.356	Pygocentrus_nattereri
ENSLACG00000009168	-	53	37.330	ENSPNAG00000015949	-	95	41.417	Pygocentrus_nattereri
ENSLACG00000009168	-	56	30.339	ENSPNAG00000009767	-	50	30.339	Pygocentrus_nattereri
ENSLACG00000009168	-	74	40.241	ENSPNAG00000009058	-	99	43.461	Pygocentrus_nattereri
ENSLACG00000009168	-	58	31.852	ENSSFOG00015024061	-	85	31.852	Scleropages_formosus
ENSLACG00000009168	-	61	37.470	ENSSFOG00015016168	-	95	42.105	Scleropages_formosus
ENSLACG00000009168	-	69	30.240	ENSSDUG00000010009	-	61	30.240	Seriola_dumerili
ENSLACG00000009168	-	57	34.200	ENSSDUG00000011043	-	63	34.200	Seriola_dumerili
ENSLACG00000009168	-	86	31.022	ENSSPAG00000008169	-	85	31.022	Stegastes_partitus
ENSLACG00000009168	-	69	44.589	ENSTRUG00000024803	-	99	47.961	Takifugu_rubripes
ENSLACG00000009168	-	71	31.134	ENSXMAG00000023507	-	92	33.402	Xiphophorus_maculatus
ENSLACG00000009168	-	67	30.736	ENSXMAG00000025957	-	80	34.698	Xiphophorus_maculatus