EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000009187 (Gene tree)
Gene ID
102361181
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
187924 bases
Position
chrJH127078.1:401243-589166
Accession
102361181
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000010429zf-C2H2PF00096.265.9e-69111
ENSLACP00000010429zf-C2H2PF00096.265.9e-69211
ENSLACP00000010429zf-C2H2PF00096.265.9e-69311
ENSLACP00000010429zf-C2H2PF00096.265.9e-69411
ENSLACP00000010429zf-C2H2PF00096.265.9e-69511
ENSLACP00000010429zf-C2H2PF00096.265.9e-69611
ENSLACP00000010429zf-C2H2PF00096.265.9e-69711
ENSLACP00000010429zf-C2H2PF00096.265.9e-69811
ENSLACP00000010429zf-C2H2PF00096.265.9e-69911
ENSLACP00000010429zf-C2H2PF00096.265.9e-691011
ENSLACP00000010429zf-C2H2PF00096.265.9e-691111
ENSLACP00000010429zf-metPF12874.78.5e-2614
ENSLACP00000010429zf-metPF12874.78.5e-2624
ENSLACP00000010429zf-metPF12874.78.5e-2634
ENSLACP00000010429zf-metPF12874.78.5e-2644
ENSLACP00000010429zf-C2H2_jazPF12171.86.1e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000010508PRDM5-2015214XM_005999344ENSLACP00000010429578 (aa)XP_005999406H3ALA8
Gene Model
Click here to download ENSLACG00000009187's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009187's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000009187PRDM58232.227ENSLACG00000001147ZNF1315432.227
ENSLACG00000009187PRDM58037.427ENSLACG00000010161MAZ7632.524
ENSLACG00000009187PRDM58837.500ENSLACG00000003588SCRT15737.500
ENSLACG00000009187PRDM57940.404ENSLACG00000017381-9932.075
ENSLACG00000009187PRDM58033.754ENSLACG00000009005-10034.539
ENSLACG00000009187PRDM58434.902ENSLACG00000009642-10034.902
ENSLACG00000009187PRDM58037.037ENSLACG00000005264-9830.814
ENSLACG00000009187PRDM58536.449ENSLACG00000012406ZNF4239232.418
ENSLACG00000009187PRDM57630.734ENSLACG00000003626ZBTB416130.734
ENSLACG00000009187PRDM58931.716ENSLACG00000014708-6134.211
ENSLACG00000009187PRDM56241.509ENSLACG00000010025ZNF5819041.176
ENSLACG00000009187PRDM57536.842ENSLACG00000010551ZFAT5536.842
ENSLACG00000009187PRDM58642.982ENSLACG00000010627ZNF2366542.982
ENSLACG00000009187PRDM58339.752ENSLACG00000012207GFI1B6139.752
ENSLACG00000009187PRDM58536.165ENSLACG00000004191-8336.165
ENSLACG00000009187PRDM58737.383ENSLACG00000007021ZNF5219830.851
ENSLACG00000009187PRDM59346.939ENSLACG00000009283RREB15646.939
ENSLACG00000009187PRDM58437.079ENSLACG00000007310-9937.079
ENSLACG00000009187PRDM59240.789ENSLACG00000017560PRDM125440.789
ENSLACG00000009187PRDM58039.286ENSLACG00000017590-5439.286
ENSLACG00000009187PRDM57937.059ENSLACG00000010143ZNF3845037.059
ENSLACG00000009187PRDM55640.876ENSLACG00000005413snai25240.876
ENSLACG00000009187PRDM58037.224ENSLACG00000022211-7637.224
ENSLACG00000009187PRDM56231.496ENSLACG00000011247OVOL25530.496
ENSLACG00000009187PRDM55740.288ENSLACG00000017707SNAI15640.288
ENSLACG00000009187PRDM55756.757ENSLACG00000011466ZBTB245455.000
ENSLACG00000009187PRDM57932.808ENSLACG00000000891ZNF3199433.056
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000009187PRDM59983.362ENSG00000138738PRDM59283.016Homo_sapiens
ENSLACG00000009187PRDM59981.391ENSAPOG00000023220prdm59181.174Acanthochromis_polyacanthus
ENSLACG00000009187PRDM59978.646ENSAMEG00000003050PRDM510078.472Ailuropoda_melanoleuca
ENSLACG00000009187PRDM59882.478ENSACIG00000000406prdm59182.655Amphilophus_citrinellus
ENSLACG00000009187PRDM59982.261ENSAOCG00000014806prdm59181.897Amphiprion_ocellaris
ENSLACG00000009187PRDM59972.315ENSAPEG00000016846prdm59073.702Amphiprion_percula
ENSLACG00000009187PRDM59985.565ENSATEG00000013829prdm59284.974Anabas_testudineus
ENSLACG00000009187PRDM59992.561ENSAPLG00000013828PRDM59692.561Anas_platyrhynchos
ENSLACG00000009187PRDM59985.913ENSACAG00000012999PRDM59185.913Anolis_carolinensis
ENSLACG00000009187PRDM59990.823ENSANAG00000027411PRDM58790.823Aotus_nancymaae
ENSLACG00000009187PRDM59982.261ENSACLG00000017996prdm59182.038Astatotilapia_calliptera
ENSLACG00000009187PRDM59284.515ENSAMXG00000041864prdm59984.701Astyanax_mexicanus
ENSLACG00000009187PRDM59982.842ENSBTAG00000012111PRDM59282.842Bos_taurus
ENSLACG00000009187PRDM59990.190ENSCJAG00000003133PRDM58790.190Callithrix_jacchus
ENSLACG00000009187PRDM59975.172ENSCAFG00000004179PRDM59975.043Canis_familiaris
ENSLACG00000009187PRDM59982.842ENSCAFG00020017685PRDM59282.322Canis_lupus_dingo
ENSLACG00000009187PRDM59982.292ENSCHIG00000018772PRDM59182.118Capra_hircus
ENSLACG00000009187PRDM59983.556ENSTSYG00000009630PRDM59183.556Carlito_syrichta
ENSLACG00000009187PRDM59989.333ENSCAPG00000015217PRDM510089.333Cavia_aperea
ENSLACG00000009187PRDM59989.873ENSCPOG00000012883PRDM510089.333Cavia_porcellus
ENSLACG00000009187PRDM59990.506ENSCCAG00000023157PRDM58790.506Cebus_capucinus
ENSLACG00000009187PRDM59990.506ENSCATG00000042510PRDM58790.506Cercocebus_atys
ENSLACG00000009187PRDM59989.557ENSCLAG00000005392PRDM510089.333Chinchilla_lanigera
ENSLACG00000009187PRDM59980.069ENSCSAG00000003729PRDM59179.549Chlorocebus_sabaeus
ENSLACG00000009187PRDM59979.371ENSCHOG00000007801PRDM58279.371Choloepus_hoffmanni
ENSLACG00000009187PRDM59991.610ENSCPBG00000024735PRDM59191.610Chrysemys_picta_bellii
ENSLACG00000009187PRDM59990.506ENSCANG00000036807PRDM58790.506Colobus_angolensis_palliatus
ENSLACG00000009187PRDM59990.190ENSCGRG00001010581Prdm58790.190Cricetulus_griseus_chok1gshd
ENSLACG00000009187PRDM59971.453ENSCGRG00000010996-9570.934Cricetulus_griseus_crigri
ENSLACG00000009187PRDM59983.130ENSCSEG00000019979prdm59182.211Cynoglossus_semilaevis
ENSLACG00000009187PRDM59980.000ENSCVAG00000013692prdm59280.138Cyprinodon_variegatus
ENSLACG00000009187PRDM59983.536ENSDARG00000006288prdm59183.536Danio_rerio
ENSLACG00000009187PRDM59982.957ENSDNOG00000002009PRDM510082.435Dasypus_novemcinctus
ENSLACG00000009187PRDM59989.241ENSDORG00000007739Prdm58789.241Dipodomys_ordii
ENSLACG00000009187PRDM59963.258ENSETEG00000020268PRDM58185.333Echinops_telfairi
ENSLACG00000009187PRDM59970.681ENSEBUG00000004301prdm59171.030Eptatretus_burgeri
ENSLACG00000009187PRDM59990.823ENSEASG00005018365PRDM58790.823Equus_asinus_asinus
ENSLACG00000009187PRDM59968.519ENSECAG00000024747-8678.505Equus_caballus
ENSLACG00000009187PRDM59981.466ENSECAG00000011516PRDM58180.855Equus_caballus
ENSLACG00000009187PRDM59976.099ENSEEUG00000010306PRDM59176.099Erinaceus_europaeus
ENSLACG00000009187PRDM59982.752ENSELUG00000005894prdm58382.752Esox_lucius
ENSLACG00000009187PRDM59982.842ENSFCAG00000025656PRDM59282.322Felis_catus
ENSLACG00000009187PRDM59484.586ENSFALG00000008381PRDM58384.586Ficedula_albicollis
ENSLACG00000009187PRDM59989.873ENSFDAG00000021361PRDM58789.873Fukomys_damarensis
ENSLACG00000009187PRDM59982.783ENSFHEG00000013040prdm59181.067Fundulus_heteroclitus
ENSLACG00000009187PRDM59375.658ENSGMOG00000012038prdm58775.658Gadus_morhua
ENSLACG00000009187PRDM59992.042ENSGALG00000011963PRDM59192.042Gallus_gallus
ENSLACG00000009187PRDM59984.568ENSGAFG00000019233prdm58584.362Gambusia_affinis
ENSLACG00000009187PRDM59989.722ENSGAGG00000020362PRDM58889.722Gopherus_agassizii
ENSLACG00000009187PRDM59990.506ENSGGOG00000013562PRDM58790.506Gorilla_gorilla
ENSLACG00000009187PRDM59982.609ENSHBUG00000023375prdm59180.829Haplochromis_burtoni
ENSLACG00000009187PRDM59976.423ENSHGLG00000003010PRDM58681.646Heterocephalus_glaber_female
ENSLACG00000009187PRDM59990.190ENSHGLG00100003696PRDM58790.190Heterocephalus_glaber_male
ENSLACG00000009187PRDM59984.722ENSHCOG00000012131prdm59184.722Hippocampus_comes
ENSLACG00000009187PRDM59984.896ENSIPUG00000001248prdm59184.749Ictalurus_punctatus
ENSLACG00000009187PRDM59988.000ENSSTOG00000004741PRDM510088.000Ictidomys_tridecemlineatus
ENSLACG00000009187PRDM59989.557ENSJJAG00000011464Prdm510088.667Jaculus_jaculus
ENSLACG00000009187PRDM59982.783ENSKMAG00000013663prdm59181.034Kryptolebias_marmoratus
ENSLACG00000009187PRDM59985.739ENSLBEG00000022736prdm59284.974Labrus_bergylta
ENSLACG00000009187PRDM59989.024ENSLOCG00000009778prdm59188.850Lepisosteus_oculatus
ENSLACG00000009187PRDM59980.069ENSLAFG00000006532PRDM510084.810Loxodonta_africana
ENSLACG00000009187PRDM59990.506ENSMFAG00000045845PRDM58790.506Macaca_fascicularis
ENSLACG00000009187PRDM59990.506ENSMMUG00000003249PRDM58790.506Macaca_mulatta
ENSLACG00000009187PRDM59990.506ENSMNEG00000019018PRDM58790.506Macaca_nemestrina
ENSLACG00000009187PRDM59983.362ENSMLEG00000023145PRDM59683.362Mandrillus_leucophaeus
ENSLACG00000009187PRDM59984.000ENSMAMG00000013419prdm59183.652Mastacembelus_armatus
ENSLACG00000009187PRDM59982.609ENSMZEG00005020645prdm59180.829Maylandia_zebra
ENSLACG00000009187PRDM59992.215ENSMGAG00000010710PRDM59692.215Meleagris_gallopavo
ENSLACG00000009187PRDM59990.190ENSMAUG00000006768Prdm58790.190Mesocricetus_auratus
ENSLACG00000009187PRDM59989.873ENSMICG00000001459PRDM58789.873Microcebus_murinus
ENSLACG00000009187PRDM59990.190ENSMOCG00000016267Prdm58790.190Microtus_ochrogaster
ENSLACG00000009187PRDM510082.211ENSMMOG00000006035prdm59181.693Mola_mola
ENSLACG00000009187PRDM510082.616ENSMODG00000018942PRDM59282.444Monodelphis_domestica
ENSLACG00000009187PRDM59979.826ENSMALG00000013934prdm59178.756Monopterus_albus
ENSLACG00000009187PRDM59989.873MGP_CAROLIEiJ_G0028463Prdm58789.873Mus_caroli
ENSLACG00000009187PRDM59989.557ENSMUSG00000029913Prdm58789.557Mus_musculus
ENSLACG00000009187PRDM59989.873MGP_PahariEiJ_G0022203Prdm58789.873Mus_pahari
ENSLACG00000009187PRDM59989.557MGP_SPRETEiJ_G0029467Prdm58789.557Mus_spretus
ENSLACG00000009187PRDM59982.842ENSMPUG00000017415PRDM59282.322Mustela_putorius_furo
ENSLACG00000009187PRDM59975.433ENSMLUG00000006097PRDM510075.433Myotis_lucifugus
ENSLACG00000009187PRDM59990.190ENSNGAG00000018317Prdm58790.190Nannospalax_galili
ENSLACG00000009187PRDM59972.603ENSNBRG00000004976prdm59077.990Neolamprologus_brichardi
ENSLACG00000009187PRDM59990.506ENSNLEG00000009107PRDM58790.506Nomascus_leucogenys
ENSLACG00000009187PRDM58182.479ENSMEUG00000006576-6182.479Notamacropus_eugenii
ENSLACG00000009187PRDM59269.830ENSOPRG00000011066-7769.830Ochotona_princeps
ENSLACG00000009187PRDM59989.873ENSODEG00000009133PRDM58789.873Octodon_degus
ENSLACG00000009187PRDM59985.217ENSONIG00000003111prdm59284.456Oreochromis_niloticus
ENSLACG00000009187PRDM59978.541ENSOANG00000015109PRDM58679.221Ornithorhynchus_anatinus
ENSLACG00000009187PRDM57598.889ENSOANG00000006197-10098.889Ornithorhynchus_anatinus
ENSLACG00000009187PRDM59976.430ENSOCUG00000013454PRDM59877.123Oryctolagus_cuniculus
ENSLACG00000009187PRDM59981.739ENSORLG00000016247prdm59181.865Oryzias_latipes
ENSLACG00000009187PRDM59981.913ENSORLG00020018051prdm59181.865Oryzias_latipes_hni
ENSLACG00000009187PRDM59981.739ENSORLG00015013760prdm59181.865Oryzias_latipes_hsok
ENSLACG00000009187PRDM59981.944ENSOMEG00000005143prdm59181.552Oryzias_melastigma
ENSLACG00000009187PRDM59276.083ENSOGAG00000009996PRDM59875.701Otolemur_garnettii
ENSLACG00000009187PRDM59981.939ENSOARG00000015473PRDM510081.182Ovis_aries
ENSLACG00000009187PRDM59983.362ENSPPAG00000043045PRDM59883.362Pan_paniscus
ENSLACG00000009187PRDM59983.016ENSPPRG00000001020PRDM59282.496Panthera_pardus
ENSLACG00000009187PRDM59982.669ENSPTIG00000010807PRDM59282.322Panthera_tigris_altaica
ENSLACG00000009187PRDM59990.506ENSPTRG00000016403PRDM58790.506Pan_troglodytes
ENSLACG00000009187PRDM59990.506ENSPANG00000023612PRDM58790.506Papio_anubis
ENSLACG00000009187PRDM59955.424ENSPKIG00000015492prdm59060.417Paramormyrops_kingsleyae
ENSLACG00000009187PRDM59991.349ENSPSIG00000013505PRDM59191.349Pelodiscus_sinensis
ENSLACG00000009187PRDM59979.130ENSPMGG00000012622prdm59178.584Periophthalmus_magnuspinnatus
ENSLACG00000009187PRDM58075.485ENSPMAG00000005248prdm510076.456Petromyzon_marinus
ENSLACG00000009187PRDM59874.914ENSPFOG00000018630prdm58573.926Poecilia_formosa
ENSLACG00000009187PRDM59984.522ENSPLAG00000014148prdm59184.174Poecilia_latipinna
ENSLACG00000009187PRDM59982.609ENSPMEG00000018002prdm59182.038Poecilia_mexicana
ENSLACG00000009187PRDM59982.609ENSPREG00000018366prdm59182.038Poecilia_reticulata
ENSLACG00000009187PRDM59983.362ENSPPYG00000015031PRDM59283.362Pongo_abelii
ENSLACG00000009187PRDM59977.816ENSPCAG00000011671PRDM59677.470Procavia_capensis
ENSLACG00000009187PRDM59989.873ENSPCOG00000022828PRDM58789.873Propithecus_coquereli
ENSLACG00000009187PRDM59978.028ENSPVAG00000012309PRDM59677.990Pteropus_vampyrus
ENSLACG00000009187PRDM59982.087ENSPNYG00000012194prdm59181.865Pundamilia_nyererei
ENSLACG00000009187PRDM59982.609ENSPNAG00000026181prdm59182.609Pygocentrus_nattereri
ENSLACG00000009187PRDM59981.109ENSPNAG00000023191-9881.109Pygocentrus_nattereri
ENSLACG00000009187PRDM59975.327ENSRNOG00000023679Prdm59075.327Rattus_norvegicus
ENSLACG00000009187PRDM59990.506ENSRBIG00000041307PRDM58790.506Rhinopithecus_bieti
ENSLACG00000009187PRDM59968.738ENSRROG00000035343PRDM59674.697Rhinopithecus_roxellana
ENSLACG00000009187PRDM59990.506ENSSBOG00000022100PRDM58790.506Saimiri_boliviensis_boliviensis
ENSLACG00000009187PRDM59981.967ENSSHAG00000003250PRDM510081.967Sarcophilus_harrisii
ENSLACG00000009187PRDM59981.043ENSSFOG00015020478prdm59179.896Scleropages_formosus
ENSLACG00000009187PRDM59985.739ENSSMAG00000018844prdm59285.147Scophthalmus_maximus
ENSLACG00000009187PRDM59983.951ENSSDUG00000020397prdm59182.211Seriola_dumerili
ENSLACG00000009187PRDM59984.866ENSSLDG00000013353prdm59182.211Seriola_lalandi_dorsalis
ENSLACG00000009187PRDM59790.598ENSSARG00000014129-6290.598Sorex_araneus
ENSLACG00000009187PRDM59997.468ENSSPUG00000009941PRDM58797.468Sphenodon_punctatus
ENSLACG00000009187PRDM59985.043ENSSPAG00000013866prdm59284.801Stegastes_partitus
ENSLACG00000009187PRDM59983.016ENSSSCG00000009101PRDM59580.245Sus_scrofa
ENSLACG00000009187PRDM59991.667ENSTGUG00000001920PRDM59691.667Taeniopygia_guttata
ENSLACG00000009187PRDM59981.391ENSTRUG00000013850prdm59181.379Takifugu_rubripes
ENSLACG00000009187PRDM59967.188ENSTNIG00000005901prdm59166.271Tetraodon_nigroviridis
ENSLACG00000009187PRDM59977.259ENSTBEG00000015386PRDM58276.385Tupaia_belangeri
ENSLACG00000009187PRDM59981.976ENSTTRG00000010996PRDM59281.976Tursiops_truncatus
ENSLACG00000009187PRDM59989.744ENSUAMG00000009994PRDM57189.744Ursus_americanus
ENSLACG00000009187PRDM59990.823ENSUMAG00000003733PRDM59390.823Ursus_maritimus
ENSLACG00000009187PRDM59972.964ENSVPAG00000007435PRDM59472.617Vicugna_pacos
ENSLACG00000009187PRDM59983.016ENSVVUG00000013192PRDM59882.496Vulpes_vulpes
ENSLACG00000009187PRDM59986.285ENSXETG00000002101prdm59185.938Xenopus_tropicalis
ENSLACG00000009187PRDM59983.304ENSXCOG00000008567prdm59182.038Xiphophorus_couchianus
ENSLACG00000009187PRDM59984.362ENSXMAG00000013825prdm59182.038Xiphophorus_maculatus

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