EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009217 (Gene tree)
Gene ID: 102355213
Gene Symbol: EXOSC4
Alias: FLJ20591|RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A
Full Name: exosome component 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3911 bases
Position: chrJH126894.1:403706-407616
Accession: 102355213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010463	RNase_PH	PF01138.21	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010542	EXOSC4-201	580	XM_005996802	ENSLACP00000010463	129 (aa)	XP_005996864	H3ALE2

Gene Model

Click here to download ENSLACG00000009217's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009217	EXOSC4	98	89.764	ENSG00000178896	EXOSC4	56	88.636	Homo_sapiens
ENSLACG00000009217	EXOSC4	98	86.614	ENSAPOG00000000255	exosc4	52	86.614	Acanthochromis_polyacanthus
ENSLACG00000009217	EXOSC4	98	89.764	ENSAMEG00000006093	EXOSC4	52	89.764	Ailuropoda_melanoleuca
ENSLACG00000009217	EXOSC4	98	85.827	ENSACIG00000017924	exosc4	52	85.827	Amphilophus_citrinellus
ENSLACG00000009217	EXOSC4	98	87.402	ENSAOCG00000005105	exosc4	52	87.402	Amphiprion_ocellaris
ENSLACG00000009217	EXOSC4	98	88.189	ENSAPEG00000003972	exosc4	52	87.402	Amphiprion_percula
ENSLACG00000009217	EXOSC4	98	88.189	ENSATEG00000007766	exosc4	52	88.189	Anabas_testudineus
ENSLACG00000009217	EXOSC4	89	30.435	ENSATEG00000008886	exosc5	51	30.435	Anabas_testudineus
ENSLACG00000009217	EXOSC4	82	31.481	ENSANAG00000022449	EXOSC5	51	31.481	Aotus_nancymaae
ENSLACG00000009217	EXOSC4	98	89.764	ENSANAG00000026123	EXOSC4	52	89.764	Aotus_nancymaae
ENSLACG00000009217	EXOSC4	98	85.827	ENSACLG00000020071	exosc4	52	85.827	Astatotilapia_calliptera
ENSLACG00000009217	EXOSC4	98	87.402	ENSAMXG00000030867	exosc4	52	87.402	Astyanax_mexicanus
ENSLACG00000009217	EXOSC4	98	89.764	ENSBTAG00000014607	EXOSC4	52	89.764	Bos_taurus
ENSLACG00000009217	EXOSC4	96	46.774	WBGene00007201	exos-4.1	51	46.774	Caenorhabditis_elegans
ENSLACG00000009217	EXOSC4	98	89.764	ENSCJAG00000021458	EXOSC4	52	89.764	Callithrix_jacchus
ENSLACG00000009217	EXOSC4	98	90.551	ENSCAFG00000001521	EXOSC4	52	90.551	Canis_familiaris
ENSLACG00000009217	EXOSC4	98	90.551	ENSCAFG00020018820	EXOSC4	52	90.551	Canis_lupus_dingo
ENSLACG00000009217	EXOSC4	98	90.551	ENSCHIG00000021121	EXOSC4	52	90.551	Capra_hircus
ENSLACG00000009217	EXOSC4	98	89.764	ENSTSYG00000029697	EXOSC4	52	89.764	Carlito_syrichta
ENSLACG00000009217	EXOSC4	98	89.764	ENSCPOG00000022671	EXOSC4	52	89.764	Cavia_porcellus
ENSLACG00000009217	EXOSC4	98	89.764	ENSCATG00000029965	EXOSC4	52	89.764	Cercocebus_atys
ENSLACG00000009217	EXOSC4	98	90.551	ENSCLAG00000014676	EXOSC4	52	90.551	Chinchilla_lanigera
ENSLACG00000009217	EXOSC4	98	89.764	ENSCSAG00000008802	EXOSC4	52	89.764	Chlorocebus_sabaeus
ENSLACG00000009217	EXOSC4	98	92.913	ENSCPBG00000018860	EXOSC4	52	92.913	Chrysemys_picta_bellii
ENSLACG00000009217	EXOSC4	96	61.600	ENSCING00000009562	-	51	61.600	Ciona_intestinalis
ENSLACG00000009217	EXOSC4	98	65.625	ENSCSAVG00000008006	-	52	65.625	Ciona_savignyi
ENSLACG00000009217	EXOSC4	98	89.764	ENSCANG00000035733	EXOSC4	52	89.764	Colobus_angolensis_palliatus
ENSLACG00000009217	EXOSC4	98	89.764	ENSCGRG00001020452	Exosc4	52	89.764	Cricetulus_griseus_chok1gshd
ENSLACG00000009217	EXOSC4	98	89.764	ENSCGRG00000016505	Exosc4	52	89.764	Cricetulus_griseus_crigri
ENSLACG00000009217	EXOSC4	98	85.827	ENSCSEG00000010906	exosc4	52	85.827	Cynoglossus_semilaevis
ENSLACG00000009217	EXOSC4	98	86.614	ENSCVAG00000006625	exosc4	52	86.614	Cyprinodon_variegatus
ENSLACG00000009217	EXOSC4	98	88.976	ENSDARG00000103432	exosc4	53	88.976	Danio_rerio
ENSLACG00000009217	EXOSC4	86	34.513	ENSDARG00000040557	exosc5	78	34.513	Danio_rerio
ENSLACG00000009217	EXOSC4	98	89.764	ENSDNOG00000009800	EXOSC4	52	89.764	Dasypus_novemcinctus
ENSLACG00000009217	EXOSC4	98	90.551	ENSDORG00000008461	Exosc4	52	90.551	Dipodomys_ordii
ENSLACG00000009217	EXOSC4	98	79.528	ENSEBUG00000014277	exosc4	52	79.528	Eptatretus_burgeri
ENSLACG00000009217	EXOSC4	98	89.764	ENSEASG00005010166	EXOSC4	52	89.764	Equus_asinus_asinus
ENSLACG00000009217	EXOSC4	98	89.764	ENSECAG00000013658	EXOSC4	52	89.764	Equus_caballus
ENSLACG00000009217	EXOSC4	98	86.614	ENSELUG00000021011	exosc4	52	86.614	Esox_lucius
ENSLACG00000009217	EXOSC4	98	89.764	ENSFCAG00000034465	EXOSC4	52	89.764	Felis_catus
ENSLACG00000009217	EXOSC4	98	90.551	ENSFDAG00000006708	EXOSC4	52	90.551	Fukomys_damarensis
ENSLACG00000009217	EXOSC4	98	85.827	ENSFHEG00000013533	exosc4	52	85.827	Fundulus_heteroclitus
ENSLACG00000009217	EXOSC4	98	85.827	ENSGMOG00000002113	exosc4	51	85.827	Gadus_morhua
ENSLACG00000009217	EXOSC4	98	86.614	ENSGAFG00000021407	exosc4	52	86.614	Gambusia_affinis
ENSLACG00000009217	EXOSC4	98	83.465	ENSGACG00000017838	exosc4	50	83.465	Gasterosteus_aculeatus
ENSLACG00000009217	EXOSC4	98	89.764	ENSGGOG00000044212	-	52	89.764	Gorilla_gorilla
ENSLACG00000009217	EXOSC4	98	89.764	ENSGGOG00000040193	-	52	89.764	Gorilla_gorilla
ENSLACG00000009217	EXOSC4	98	86.614	ENSHBUG00000006605	exosc4	52	85.827	Haplochromis_burtoni
ENSLACG00000009217	EXOSC4	98	90.551	ENSHGLG00000016299	EXOSC4	52	90.551	Heterocephalus_glaber_female
ENSLACG00000009217	EXOSC4	98	90.551	ENSHGLG00100018786	EXOSC4	52	90.551	Heterocephalus_glaber_male
ENSLACG00000009217	EXOSC4	98	87.402	ENSIPUG00000011922	Exosc4	52	87.402	Ictalurus_punctatus
ENSLACG00000009217	EXOSC4	98	85.938	ENSSTOG00000002632	EXOSC4	52	85.938	Ictidomys_tridecemlineatus
ENSLACG00000009217	EXOSC4	98	89.764	ENSJJAG00000009655	Exosc4	52	89.764	Jaculus_jaculus
ENSLACG00000009217	EXOSC4	98	86.614	ENSKMAG00000015373	exosc4	52	86.614	Kryptolebias_marmoratus
ENSLACG00000009217	EXOSC4	98	84.252	ENSLBEG00000012754	exosc4	52	84.252	Labrus_bergylta
ENSLACG00000009217	EXOSC4	98	85.039	ENSLOCG00000008878	exosc4	52	85.039	Lepisosteus_oculatus
ENSLACG00000009217	EXOSC4	98	89.764	ENSLAFG00000030187	EXOSC4	52	89.764	Loxodonta_africana
ENSLACG00000009217	EXOSC4	98	89.764	ENSMFAG00000000161	EXOSC4	52	89.764	Macaca_fascicularis
ENSLACG00000009217	EXOSC4	98	89.764	ENSMMUG00000007160	EXOSC4	52	89.764	Macaca_mulatta
ENSLACG00000009217	EXOSC4	98	89.764	ENSMNEG00000033938	EXOSC4	52	89.764	Macaca_nemestrina
ENSLACG00000009217	EXOSC4	98	89.764	ENSMLEG00000041197	EXOSC4	52	89.764	Mandrillus_leucophaeus
ENSLACG00000009217	EXOSC4	98	86.614	ENSMAMG00000014749	exosc4	52	86.614	Mastacembelus_armatus
ENSLACG00000009217	EXOSC4	98	85.827	ENSMZEG00005025086	exosc4	52	85.827	Maylandia_zebra
ENSLACG00000009217	EXOSC4	98	89.764	ENSMAUG00000007911	Exosc4	52	89.764	Mesocricetus_auratus
ENSLACG00000009217	EXOSC4	98	89.764	ENSMOCG00000020295	Exosc4	52	89.764	Microtus_ochrogaster
ENSLACG00000009217	EXOSC4	98	86.614	ENSMMOG00000016779	exosc4	52	86.614	Mola_mola
ENSLACG00000009217	EXOSC4	98	90.551	ENSMODG00000010435	EXOSC4	59	90.551	Monodelphis_domestica
ENSLACG00000009217	EXOSC4	98	85.039	ENSMALG00000020564	exosc4	52	85.039	Monopterus_albus
ENSLACG00000009217	EXOSC4	98	89.764	MGP_CAROLIEiJ_G0019919	Exosc4	52	89.764	Mus_caroli
ENSLACG00000009217	EXOSC4	98	89.764	ENSMUSG00000034259	Exosc4	84	94.737	Mus_musculus
ENSLACG00000009217	EXOSC4	98	89.764	MGP_PahariEiJ_G0019929	Exosc4	52	89.764	Mus_pahari
ENSLACG00000009217	EXOSC4	98	89.764	MGP_SPRETEiJ_G0020822	Exosc4	52	89.764	Mus_spretus
ENSLACG00000009217	EXOSC4	98	90.551	ENSNGAG00000022428	Exosc4	52	90.551	Nannospalax_galili
ENSLACG00000009217	EXOSC4	98	86.614	ENSNBRG00000012326	exosc4	52	85.827	Neolamprologus_brichardi
ENSLACG00000009217	EXOSC4	98	89.764	ENSNLEG00000010449	EXOSC4	52	89.764	Nomascus_leucogenys
ENSLACG00000009217	EXOSC4	98	90.551	ENSMEUG00000011002	EXOSC4	52	90.551	Notamacropus_eugenii
ENSLACG00000009217	EXOSC4	98	90.551	ENSODEG00000013951	EXOSC4	52	90.551	Octodon_degus
ENSLACG00000009217	EXOSC4	98	85.827	ENSONIG00000009617	exosc4	52	85.827	Oreochromis_niloticus
ENSLACG00000009217	EXOSC4	98	85.827	ENSOANG00000014904	EXOSC4	52	85.827	Ornithorhynchus_anatinus
ENSLACG00000009217	EXOSC4	98	88.976	ENSOCUG00000021243	EXOSC4	52	88.976	Oryctolagus_cuniculus
ENSLACG00000009217	EXOSC4	98	88.189	ENSORLG00000017295	exosc4	52	88.189	Oryzias_latipes
ENSLACG00000009217	EXOSC4	98	88.189	ENSORLG00020009788	exosc4	52	88.189	Oryzias_latipes_hni
ENSLACG00000009217	EXOSC4	98	88.189	ENSORLG00015009754	exosc4	52	88.189	Oryzias_latipes_hsok
ENSLACG00000009217	EXOSC4	98	88.976	ENSOMEG00000005800	exosc4	52	88.976	Oryzias_melastigma
ENSLACG00000009217	EXOSC4	98	89.764	ENSOGAG00000007411	EXOSC4	52	89.764	Otolemur_garnettii
ENSLACG00000009217	EXOSC4	98	89.147	ENSOARG00000015188	EXOSC4	52	89.147	Ovis_aries
ENSLACG00000009217	EXOSC4	98	89.764	ENSPPAG00000035746	EXOSC4	52	89.764	Pan_paniscus
ENSLACG00000009217	EXOSC4	98	89.764	ENSPPRG00000019782	EXOSC4	52	89.764	Panthera_pardus
ENSLACG00000009217	EXOSC4	98	89.764	ENSPTRG00000020677	EXOSC4	52	89.764	Pan_troglodytes
ENSLACG00000009217	EXOSC4	98	89.764	ENSPANG00000023276	EXOSC4	52	89.764	Papio_anubis
ENSLACG00000009217	EXOSC4	98	86.614	ENSPKIG00000018362	exosc4	52	86.614	Paramormyrops_kingsleyae
ENSLACG00000009217	EXOSC4	95	36.000	ENSPMGG00000016974	exosc6	51	36.000	Periophthalmus_magnuspinnatus
ENSLACG00000009217	EXOSC4	98	85.827	ENSPMGG00000019307	exosc4	52	85.827	Periophthalmus_magnuspinnatus
ENSLACG00000009217	EXOSC4	98	91.339	ENSPEMG00000017031	Exosc4	52	91.339	Peromyscus_maniculatus_bairdii
ENSLACG00000009217	EXOSC4	98	85.827	ENSPMAG00000001175	exosc4	52	85.827	Petromyzon_marinus
ENSLACG00000009217	EXOSC4	98	90.551	ENSPCIG00000009102	EXOSC4	52	90.551	Phascolarctos_cinereus
ENSLACG00000009217	EXOSC4	98	86.614	ENSPFOG00000015214	exosc4	52	86.614	Poecilia_formosa
ENSLACG00000009217	EXOSC4	98	86.614	ENSPLAG00000018751	exosc4	52	86.614	Poecilia_latipinna
ENSLACG00000009217	EXOSC4	98	86.614	ENSPMEG00000023116	exosc4	52	86.614	Poecilia_mexicana
ENSLACG00000009217	EXOSC4	98	88.189	ENSPREG00000009632	exosc4	52	88.189	Poecilia_reticulata
ENSLACG00000009217	EXOSC4	94	87.603	ENSPPYG00000018959	EXOSC4	51	87.603	Pongo_abelii
ENSLACG00000009217	EXOSC4	98	89.764	ENSPCAG00000014920	EXOSC4	52	89.764	Procavia_capensis
ENSLACG00000009217	EXOSC4	98	89.764	ENSPCOG00000020992	EXOSC4	52	89.764	Propithecus_coquereli
ENSLACG00000009217	EXOSC4	98	90.551	ENSPVAG00000007100	EXOSC4	52	90.551	Pteropus_vampyrus
ENSLACG00000009217	EXOSC4	82	30.556	ENSPVAG00000013083	EXOSC5	51	30.556	Pteropus_vampyrus
ENSLACG00000009217	EXOSC4	98	86.614	ENSPNYG00000014429	exosc4	52	85.827	Pundamilia_nyererei
ENSLACG00000009217	EXOSC4	98	89.764	ENSRNOG00000012348	Exosc4	52	89.764	Rattus_norvegicus
ENSLACG00000009217	EXOSC4	98	89.764	ENSRBIG00000038476	EXOSC4	52	89.764	Rhinopithecus_bieti
ENSLACG00000009217	EXOSC4	98	89.764	ENSRROG00000038556	EXOSC4	52	89.764	Rhinopithecus_roxellana
ENSLACG00000009217	EXOSC4	99	36.923	YGR195W	SKI6	52	36.923	Saccharomyces_cerevisiae
ENSLACG00000009217	EXOSC4	98	90.551	ENSSHAG00000005397	EXOSC4	52	90.551	Sarcophilus_harrisii
ENSLACG00000009217	EXOSC4	98	85.827	ENSSFOG00015004133	exosc4	52	85.827	Scleropages_formosus
ENSLACG00000009217	EXOSC4	98	88.189	ENSSMAG00000020020	exosc4	52	88.189	Scophthalmus_maximus
ENSLACG00000009217	EXOSC4	98	86.614	ENSSDUG00000018966	exosc4	52	86.614	Seriola_dumerili
ENSLACG00000009217	EXOSC4	98	86.614	ENSSLDG00000008003	exosc4	52	86.614	Seriola_lalandi_dorsalis
ENSLACG00000009217	EXOSC4	98	88.976	ENSSSCG00000005925	EXOSC4	52	88.976	Sus_scrofa
ENSLACG00000009217	EXOSC4	98	85.827	ENSTRUG00000025054	exosc4	52	85.827	Takifugu_rubripes
ENSLACG00000009217	EXOSC4	98	86.614	ENSTNIG00000008519	exosc4	52	86.614	Tetraodon_nigroviridis
ENSLACG00000009217	EXOSC4	98	89.764	ENSUAMG00000020173	EXOSC4	52	89.764	Ursus_americanus
ENSLACG00000009217	EXOSC4	98	90.551	ENSVVUG00000009675	EXOSC4	52	90.551	Vulpes_vulpes
ENSLACG00000009217	EXOSC4	98	85.827	ENSXCOG00000015017	exosc4	52	85.827	Xiphophorus_couchianus
ENSLACG00000009217	EXOSC4	98	85.827	ENSXMAG00000016287	exosc4	52	85.827	Xiphophorus_maculatus