EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009240 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 4134 bases
Position: chrJH128179.1:405669-409802
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010490	RVT_1	PF00078.27	3.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010569	-	1653	-	ENSLACP00000010490	551 (aa)	-	H3ALG9

Gene Model

Click here to download ENSLACG00000009240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009240	-	93	74.432	ENSLACG00000006357	-	67	74.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009240	-	97	31.818	ENSACIG00000012161	-	53	31.749	Amphilophus_citrinellus
ENSLACG00000009240	-	100	33.446	ENSACIG00000013116	-	58	33.446	Amphilophus_citrinellus
ENSLACG00000009240	-	97	33.391	ENSACIG00000007038	-	50	33.391	Amphilophus_citrinellus
ENSLACG00000009240	-	95	33.272	ENSACIG00000010787	-	50	33.272	Amphilophus_citrinellus
ENSLACG00000009240	-	97	33.043	ENSACIG00000009025	-	65	33.043	Amphilophus_citrinellus
ENSLACG00000009240	-	100	39.226	ENSAMXG00000042811	-	50	39.226	Astyanax_mexicanus
ENSLACG00000009240	-	96	34.513	ENSCVAG00000004138	-	54	34.513	Cyprinodon_variegatus
ENSLACG00000009240	-	99	33.219	ENSELUG00000004597	-	60	33.276	Esox_lucius
ENSLACG00000009240	-	100	32.049	ENSFHEG00000002853	-	53	32.049	Fundulus_heteroclitus
ENSLACG00000009240	-	100	31.516	ENSFHEG00000022106	-	55	31.516	Fundulus_heteroclitus
ENSLACG00000009240	-	54	38.079	ENSGMOG00000005227	-	51	38.079	Gadus_morhua
ENSLACG00000009240	-	83	33.595	ENSGACG00000015045	-	100	33.595	Gasterosteus_aculeatus
ENSLACG00000009240	-	83	32.213	ENSGACG00000000426	-	98	32.213	Gasterosteus_aculeatus
ENSLACG00000009240	-	100	30.217	ENSHCOG00000007436	-	55	30.217	Hippocampus_comes
ENSLACG00000009240	-	100	33.165	ENSHCOG00000007397	-	52	33.165	Hippocampus_comes
ENSLACG00000009240	-	100	32.209	ENSHCOG00000007389	-	55	32.209	Hippocampus_comes
ENSLACG00000009240	-	99	32.373	ENSLBEG00000003745	-	69	32.373	Labrus_bergylta
ENSLACG00000009240	-	100	36.786	ENSLOCG00000011928	-	52	36.786	Lepisosteus_oculatus
ENSLACG00000009240	-	74	36.768	ENSLOCG00000002743	-	81	36.768	Lepisosteus_oculatus
ENSLACG00000009240	-	100	36.860	ENSLOCG00000017064	-	54	36.860	Lepisosteus_oculatus
ENSLACG00000009240	-	100	34.907	ENSONIG00000020875	-	51	34.907	Oreochromis_niloticus
ENSLACG00000009240	-	97	31.016	ENSOMEG00000015368	-	53	31.016	Oryzias_melastigma
ENSLACG00000009240	-	51	42.105	ENSPSIG00000001947	-	76	42.105	Pelodiscus_sinensis
ENSLACG00000009240	-	97	35.026	ENSPMGG00000017392	-	62	35.026	Periophthalmus_magnuspinnatus
ENSLACG00000009240	-	89	32.485	ENSPMGG00000001593	-	54	32.485	Periophthalmus_magnuspinnatus
ENSLACG00000009240	-	100	34.729	ENSPLAG00000023379	-	69	34.729	Poecilia_latipinna
ENSLACG00000009240	-	96	33.511	ENSPLAG00000011810	-	53	33.511	Poecilia_latipinna
ENSLACG00000009240	-	99	32.979	ENSPLAG00000011817	-	58	33.156	Poecilia_latipinna
ENSLACG00000009240	-	96	33.511	ENSPLAG00000022994	-	53	33.511	Poecilia_latipinna
ENSLACG00000009240	-	100	33.275	ENSPMEG00000003431	-	56	33.275	Poecilia_mexicana
ENSLACG00000009240	-	100	31.857	ENSPMEG00000008574	-	56	31.857	Poecilia_mexicana
ENSLACG00000009240	-	100	32.308	ENSPREG00000005756	-	53	32.308	Poecilia_reticulata
ENSLACG00000009240	-	100	33.162	ENSPREG00000012484	-	52	33.162	Poecilia_reticulata
ENSLACG00000009240	-	100	31.749	ENSPREG00000005456	-	50	31.749	Poecilia_reticulata
ENSLACG00000009240	-	92	31.047	ENSPNAG00000014625	-	51	31.227	Pygocentrus_nattereri
ENSLACG00000009240	-	100	33.223	ENSPNAG00000007038	-	51	33.223	Pygocentrus_nattereri
ENSLACG00000009240	-	100	33.163	ENSXCOG00000008881	-	66	33.163	Xiphophorus_couchianus
ENSLACG00000009240	-	100	38.776	ENSXCOG00000013093	-	51	38.776	Xiphophorus_couchianus
ENSLACG00000009240	-	100	32.095	ENSXMAG00000028672	-	53	32.095	Xiphophorus_maculatus