EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009293 (Gene tree)
Gene ID: 102359643
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 34515 bases
Position: chrJH128467.1:409414-443928
Accession: 102359643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010547	CMS1	PF14617.6	9e-31	1	1
ENSLACP00000010547	DEAD	PF00270.29	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010626	CMSS1-201	1957	XM_006008944	ENSLACP00000010547	230 (aa)	XP_006009006	H3ALM6

Gene Model

Click here to download ENSLACG00000009293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009293	CMSS1	100	63.913	ENSG00000184220	CMSS1	98	71.250	Homo_sapiens
ENSLACG00000009293	CMSS1	88	65.842	ENSAPOG00000010604	cmss1	82	65.842	Acanthochromis_polyacanthus
ENSLACG00000009293	CMSS1	100	65.368	ENSAMEG00000004092	CMSS1	88	65.368	Ailuropoda_melanoleuca
ENSLACG00000009293	CMSS1	88	57.426	ENSACIG00000021854	cmss1	75	57.426	Amphilophus_citrinellus
ENSLACG00000009293	CMSS1	88	65.842	ENSAOCG00000013361	cmss1	70	65.842	Amphiprion_ocellaris
ENSLACG00000009293	CMSS1	88	65.842	ENSAPEG00000005829	cmss1	77	63.229	Amphiprion_percula
ENSLACG00000009293	CMSS1	90	66.505	ENSATEG00000008209	cmss1	79	63.319	Anabas_testudineus
ENSLACG00000009293	CMSS1	100	67.391	ENSAPLG00000010542	CMSS1	99	67.391	Anas_platyrhynchos
ENSLACG00000009293	CMSS1	100	63.519	ENSACAG00000011065	CMSS1	85	63.948	Anolis_carolinensis
ENSLACG00000009293	CMSS1	100	63.478	ENSANAG00000023565	CMSS1	87	63.478	Aotus_nancymaae
ENSLACG00000009293	CMSS1	88	63.861	ENSACLG00000027294	cmss1	69	63.861	Astatotilapia_calliptera
ENSLACG00000009293	CMSS1	87	61.000	ENSAMXG00000002046	cmss1	69	60.891	Astyanax_mexicanus
ENSLACG00000009293	CMSS1	100	63.913	ENSBTAG00000013663	CMSS1	83	63.913	Bos_taurus
ENSLACG00000009293	CMSS1	100	64.783	ENSCJAG00000000610	CMSS1	87	64.783	Callithrix_jacchus
ENSLACG00000009293	CMSS1	100	65.652	ENSCAFG00000009230	CMSS1	83	65.652	Canis_familiaris
ENSLACG00000009293	CMSS1	88	65.842	ENSCAFG00020024156	-	63	65.842	Canis_lupus_dingo
ENSLACG00000009293	CMSS1	100	65.652	ENSCAFG00020009464	-	83	65.652	Canis_lupus_dingo
ENSLACG00000009293	CMSS1	100	64.783	ENSCHIG00000013003	CMSS1	83	64.783	Capra_hircus
ENSLACG00000009293	CMSS1	100	64.348	ENSTSYG00000009266	CMSS1	88	64.348	Carlito_syrichta
ENSLACG00000009293	CMSS1	91	56.190	ENSCAPG00000013584	CMSS1	87	60.753	Cavia_aperea
ENSLACG00000009293	CMSS1	100	66.957	ENSCPOG00000014680	CMSS1	82	66.957	Cavia_porcellus
ENSLACG00000009293	CMSS1	100	63.913	ENSCCAG00000034685	CMSS1	87	63.913	Cebus_capucinus
ENSLACG00000009293	CMSS1	100	64.783	ENSCATG00000031980	CMSS1	87	64.783	Cercocebus_atys
ENSLACG00000009293	CMSS1	100	64.348	ENSCLAG00000011241	CMSS1	98	64.348	Chinchilla_lanigera
ENSLACG00000009293	CMSS1	100	64.783	ENSCSAG00000006024	CMSS1	93	64.783	Chlorocebus_sabaeus
ENSLACG00000009293	CMSS1	100	48.261	ENSCHOG00000012098	CMSS1	83	48.261	Choloepus_hoffmanni
ENSLACG00000009293	CMSS1	82	43.979	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSLACG00000009293	CMSS1	53	42.742	ENSCSAVG00000002309	-	98	42.742	Ciona_savignyi
ENSLACG00000009293	CMSS1	100	64.783	ENSCANG00000031337	CMSS1	87	64.783	Colobus_angolensis_palliatus
ENSLACG00000009293	CMSS1	100	63.043	ENSCGRG00001014305	Cmss1	82	63.913	Cricetulus_griseus_chok1gshd
ENSLACG00000009293	CMSS1	100	63.913	ENSCGRG00000006722	Cmss1	89	63.913	Cricetulus_griseus_crigri
ENSLACG00000009293	CMSS1	88	62.871	ENSCSEG00000004958	cmss1	69	62.871	Cynoglossus_semilaevis
ENSLACG00000009293	CMSS1	88	65.347	ENSCVAG00000005039	cmss1	77	63.229	Cyprinodon_variegatus
ENSLACG00000009293	CMSS1	99	54.978	ENSDARG00000112579	cmss1	79	54.978	Danio_rerio
ENSLACG00000009293	CMSS1	100	65.217	ENSDNOG00000040418	CMSS1	83	65.217	Dasypus_novemcinctus
ENSLACG00000009293	CMSS1	100	65.217	ENSDORG00000010461	Cmss1	82	65.217	Dipodomys_ordii
ENSLACG00000009293	CMSS1	58	50.746	ENSEBUG00000002156	-	98	50.746	Eptatretus_burgeri
ENSLACG00000009293	CMSS1	100	63.478	ENSEASG00005010966	CMSS1	99	63.927	Equus_asinus_asinus
ENSLACG00000009293	CMSS1	100	63.043	ENSECAG00000015662	CMSS1	99	62.719	Equus_caballus
ENSLACG00000009293	CMSS1	87	46.500	ENSEEUG00000007624	-	82	45.217	Erinaceus_europaeus
ENSLACG00000009293	CMSS1	88	61.386	ENSELUG00000019459	cmss1	75	59.471	Esox_lucius
ENSLACG00000009293	CMSS1	100	65.217	ENSFCAG00000044577	CMSS1	82	65.217	Felis_catus
ENSLACG00000009293	CMSS1	100	66.087	ENSFALG00000005816	CMSS1	96	66.087	Ficedula_albicollis
ENSLACG00000009293	CMSS1	100	65.652	ENSFDAG00000012577	CMSS1	100	65.652	Fukomys_damarensis
ENSLACG00000009293	CMSS1	99	59.740	ENSFHEG00000012008	cmss1	83	63.861	Fundulus_heteroclitus
ENSLACG00000009293	CMSS1	88	63.366	ENSGMOG00000016729	cmss1	72	63.366	Gadus_morhua
ENSLACG00000009293	CMSS1	100	66.957	ENSGALG00000015267	CMSS1	87	66.957	Gallus_gallus
ENSLACG00000009293	CMSS1	90	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSLACG00000009293	CMSS1	88	61.881	ENSGACG00000002798	cmss1	72	61.881	Gasterosteus_aculeatus
ENSLACG00000009293	CMSS1	100	68.261	ENSGAGG00000019861	CMSS1	89	68.261	Gopherus_agassizii
ENSLACG00000009293	CMSS1	100	64.348	ENSGGOG00000014125	CMSS1	87	64.348	Gorilla_gorilla
ENSLACG00000009293	CMSS1	88	63.861	ENSHBUG00000008431	cmss1	71	63.861	Haplochromis_burtoni
ENSLACG00000009293	CMSS1	99	66.228	ENSHGLG00000019481	CMSS1	92	66.228	Heterocephalus_glaber_female
ENSLACG00000009293	CMSS1	99	66.228	ENSHGLG00100010314	CMSS1	91	66.228	Heterocephalus_glaber_male
ENSLACG00000009293	CMSS1	94	61.638	ENSHCOG00000003222	cmss1	76	63.677	Hippocampus_comes
ENSLACG00000009293	CMSS1	88	62.376	ENSIPUG00000011591	cmss1	70	62.376	Ictalurus_punctatus
ENSLACG00000009293	CMSS1	100	65.652	ENSSTOG00000019366	CMSS1	82	65.652	Ictidomys_tridecemlineatus
ENSLACG00000009293	CMSS1	100	66.087	ENSJJAG00000014894	Cmss1	96	65.899	Jaculus_jaculus
ENSLACG00000009293	CMSS1	88	61.386	ENSKMAG00000002390	cmss1	81	61.386	Kryptolebias_marmoratus
ENSLACG00000009293	CMSS1	88	60.591	ENSLBEG00000006298	cmss1	83	60.591	Labrus_bergylta
ENSLACG00000009293	CMSS1	99	59.825	ENSLOCG00000009391	cmss1	81	59.825	Lepisosteus_oculatus
ENSLACG00000009293	CMSS1	100	64.783	ENSLAFG00000017509	CMSS1	100	64.783	Loxodonta_africana
ENSLACG00000009293	CMSS1	100	64.348	ENSMFAG00000045006	CMSS1	87	64.348	Macaca_fascicularis
ENSLACG00000009293	CMSS1	100	63.913	ENSMMUG00000002939	CMSS1	97	64.091	Macaca_mulatta
ENSLACG00000009293	CMSS1	100	64.348	ENSMNEG00000031315	CMSS1	87	64.348	Macaca_nemestrina
ENSLACG00000009293	CMSS1	100	64.783	ENSMLEG00000033660	CMSS1	87	64.783	Mandrillus_leucophaeus
ENSLACG00000009293	CMSS1	88	68.317	ENSMAMG00000017176	cmss1	79	64.912	Mastacembelus_armatus
ENSLACG00000009293	CMSS1	88	63.861	ENSMZEG00005021886	cmss1	69	63.861	Maylandia_zebra
ENSLACG00000009293	CMSS1	100	66.957	ENSMGAG00000014360	CMSS1	100	66.957	Meleagris_gallopavo
ENSLACG00000009293	CMSS1	100	43.162	ENSMAUG00000020609	Cmss1	78	43.162	Mesocricetus_auratus
ENSLACG00000009293	CMSS1	100	65.652	ENSMICG00000048977	CMSS1	88	65.652	Microcebus_murinus
ENSLACG00000009293	CMSS1	100	66.087	ENSMOCG00000021937	Cmss1	83	66.087	Microtus_ochrogaster
ENSLACG00000009293	CMSS1	88	63.861	ENSMMOG00000019794	cmss1	84	63.861	Mola_mola
ENSLACG00000009293	CMSS1	100	67.826	ENSMODG00000002275	CMSS1	86	67.826	Monodelphis_domestica
ENSLACG00000009293	CMSS1	88	65.347	ENSMALG00000004250	cmss1	69	65.347	Monopterus_albus
ENSLACG00000009293	CMSS1	100	64.783	MGP_CAROLIEiJ_G0020824	Cmss1	83	64.783	Mus_caroli
ENSLACG00000009293	CMSS1	100	65.652	ENSMUSG00000022748	Cmss1	83	65.652	Mus_musculus
ENSLACG00000009293	CMSS1	100	66.522	MGP_PahariEiJ_G0016524	Cmss1	83	66.522	Mus_pahari
ENSLACG00000009293	CMSS1	100	65.652	MGP_SPRETEiJ_G0021724	Cmss1	83	65.652	Mus_spretus
ENSLACG00000009293	CMSS1	99	65.066	ENSMPUG00000011324	CMSS1	88	65.066	Mustela_putorius_furo
ENSLACG00000009293	CMSS1	100	63.793	ENSMLUG00000001131	CMSS1	87	63.793	Myotis_lucifugus
ENSLACG00000009293	CMSS1	100	64.348	ENSNGAG00000020316	Cmss1	82	64.348	Nannospalax_galili
ENSLACG00000009293	CMSS1	88	63.366	ENSNBRG00000003095	cmss1	69	63.366	Neolamprologus_brichardi
ENSLACG00000009293	CMSS1	100	64.783	ENSNLEG00000034172	CMSS1	87	64.783	Nomascus_leucogenys
ENSLACG00000009293	CMSS1	100	56.957	ENSMEUG00000014505	CMSS1	100	56.957	Notamacropus_eugenii
ENSLACG00000009293	CMSS1	100	64.783	ENSOPRG00000002986	CMSS1	82	64.783	Ochotona_princeps
ENSLACG00000009293	CMSS1	100	63.913	ENSODEG00000003558	-	84	63.913	Octodon_degus
ENSLACG00000009293	CMSS1	100	56.522	ENSODEG00000001853	-	81	56.522	Octodon_degus
ENSLACG00000009293	CMSS1	100	66.957	ENSODEG00000005226	-	82	66.957	Octodon_degus
ENSLACG00000009293	CMSS1	95	55.046	ENSODEG00000009446	-	85	55.046	Octodon_degus
ENSLACG00000009293	CMSS1	88	64.356	ENSONIG00000006678	cmss1	77	64.356	Oreochromis_niloticus
ENSLACG00000009293	CMSS1	100	68.261	ENSOANG00000007529	CMSS1	99	68.103	Ornithorhynchus_anatinus
ENSLACG00000009293	CMSS1	100	64.783	ENSOCUG00000025366	CMSS1	83	64.783	Oryctolagus_cuniculus
ENSLACG00000009293	CMSS1	88	65.347	ENSORLG00000020340	cmss1	71	65.347	Oryzias_latipes
ENSLACG00000009293	CMSS1	92	58.768	ENSORLG00020012235	cmss1	85	59.406	Oryzias_latipes_hni
ENSLACG00000009293	CMSS1	88	60.099	ENSORLG00015015551	cmss1	75	60.099	Oryzias_latipes_hsok
ENSLACG00000009293	CMSS1	88	64.356	ENSOMEG00000012555	cmss1	70	64.356	Oryzias_melastigma
ENSLACG00000009293	CMSS1	100	65.652	ENSOGAG00000002045	CMSS1	100	65.217	Otolemur_garnettii
ENSLACG00000009293	CMSS1	100	64.502	ENSOARG00000017899	CMSS1	79	64.502	Ovis_aries
ENSLACG00000009293	CMSS1	100	64.348	ENSPPAG00000038515	CMSS1	84	64.348	Pan_paniscus
ENSLACG00000009293	CMSS1	100	65.217	ENSPPRG00000016767	CMSS1	82	65.217	Panthera_pardus
ENSLACG00000009293	CMSS1	100	65.217	ENSPTIG00000018274	CMSS1	82	65.217	Panthera_tigris_altaica
ENSLACG00000009293	CMSS1	100	63.913	ENSPTRG00000015157	CMSS1	93	63.913	Pan_troglodytes
ENSLACG00000009293	CMSS1	100	64.783	ENSPANG00000019980	CMSS1	91	64.783	Papio_anubis
ENSLACG00000009293	CMSS1	99	62.609	ENSPKIG00000012609	cmss1	85	62.174	Paramormyrops_kingsleyae
ENSLACG00000009293	CMSS1	100	70.000	ENSPSIG00000003849	CMSS1	99	70.000	Pelodiscus_sinensis
ENSLACG00000009293	CMSS1	88	63.054	ENSPMGG00000010286	cmss1	87	63.054	Periophthalmus_magnuspinnatus
ENSLACG00000009293	CMSS1	100	63.913	ENSPEMG00000016384	Cmss1	81	63.913	Peromyscus_maniculatus_bairdii
ENSLACG00000009293	CMSS1	89	54.902	ENSPMAG00000001146	cmss1	99	55.446	Petromyzon_marinus
ENSLACG00000009293	CMSS1	100	67.391	ENSPCIG00000015656	CMSS1	86	67.391	Phascolarctos_cinereus
ENSLACG00000009293	CMSS1	88	63.861	ENSPFOG00000016849	cmss1	71	63.861	Poecilia_formosa
ENSLACG00000009293	CMSS1	88	63.366	ENSPLAG00000008323	cmss1	71	63.366	Poecilia_latipinna
ENSLACG00000009293	CMSS1	88	63.861	ENSPMEG00000021020	cmss1	70	63.861	Poecilia_mexicana
ENSLACG00000009293	CMSS1	88	63.366	ENSPREG00000007618	cmss1	69	63.366	Poecilia_reticulata
ENSLACG00000009293	CMSS1	100	63.913	ENSPPYG00000013606	CMSS1	84	63.913	Pongo_abelii
ENSLACG00000009293	CMSS1	100	65.652	ENSPCOG00000020035	CMSS1	88	65.652	Propithecus_coquereli
ENSLACG00000009293	CMSS1	100	53.043	ENSPVAG00000017031	CMSS1	82	53.043	Pteropus_vampyrus
ENSLACG00000009293	CMSS1	77	65.341	ENSPNYG00000013428	cmss1	65	65.341	Pundamilia_nyererei
ENSLACG00000009293	CMSS1	99	57.826	ENSPNAG00000007912	cmss1	78	57.826	Pygocentrus_nattereri
ENSLACG00000009293	CMSS1	100	65.217	ENSRNOG00000027888	Cmss1	89	65.652	Rattus_norvegicus
ENSLACG00000009293	CMSS1	100	64.348	ENSRBIG00000037931	CMSS1	87	64.348	Rhinopithecus_bieti
ENSLACG00000009293	CMSS1	100	64.348	ENSRROG00000042910	CMSS1	87	64.348	Rhinopithecus_roxellana
ENSLACG00000009293	CMSS1	100	63.043	ENSSBOG00000030980	CMSS1	87	63.043	Saimiri_boliviensis_boliviensis
ENSLACG00000009293	CMSS1	100	68.261	ENSSHAG00000009321	CMSS1	90	69.130	Sarcophilus_harrisii
ENSLACG00000009293	CMSS1	99	63.043	ENSSFOG00015001509	cmss1	79	63.043	Scleropages_formosus
ENSLACG00000009293	CMSS1	88	64.851	ENSSMAG00000001653	cmss1	69	64.851	Scophthalmus_maximus
ENSLACG00000009293	CMSS1	88	66.832	ENSSDUG00000007719	cmss1	80	63.043	Seriola_dumerili
ENSLACG00000009293	CMSS1	90	67.150	ENSSLDG00000012300	cmss1	76	61.202	Seriola_lalandi_dorsalis
ENSLACG00000009293	CMSS1	100	51.304	ENSSARG00000003584	CMSS1	81	51.304	Sorex_araneus
ENSLACG00000009293	CMSS1	99	68.421	ENSSPUG00000003865	CMSS1	100	67.544	Sphenodon_punctatus
ENSLACG00000009293	CMSS1	90	67.961	ENSSPAG00000019182	cmss1	63	67.822	Stegastes_partitus
ENSLACG00000009293	CMSS1	100	63.478	ENSSSCG00000011970	CMSS1	82	63.478	Sus_scrofa
ENSLACG00000009293	CMSS1	100	65.652	ENSTGUG00000013635	CMSS1	99	65.652	Taeniopygia_guttata
ENSLACG00000009293	CMSS1	88	65.842	ENSTRUG00000015265	cmss1	72	65.842	Takifugu_rubripes
ENSLACG00000009293	CMSS1	88	59.901	ENSTNIG00000002880	cmss1	73	59.901	Tetraodon_nigroviridis
ENSLACG00000009293	CMSS1	100	44.783	ENSTBEG00000016722	CMSS1	81	44.783	Tupaia_belangeri
ENSLACG00000009293	CMSS1	100	64.348	ENSTTRG00000001562	CMSS1	81	64.348	Tursiops_truncatus
ENSLACG00000009293	CMSS1	100	66.087	ENSUAMG00000024209	CMSS1	98	66.210	Ursus_americanus
ENSLACG00000009293	CMSS1	100	65.652	ENSUMAG00000001983	CMSS1	88	65.652	Ursus_maritimus
ENSLACG00000009293	CMSS1	100	53.478	ENSVPAG00000000263	CMSS1	57	70.625	Vicugna_pacos
ENSLACG00000009293	CMSS1	100	66.087	ENSVVUG00000021647	-	93	66.087	Vulpes_vulpes
ENSLACG00000009293	CMSS1	88	67.327	ENSVVUG00000007776	-	89	63.877	Vulpes_vulpes
ENSLACG00000009293	CMSS1	88	67.822	ENSXETG00000011858	cmss1	72	67.822	Xenopus_tropicalis
ENSLACG00000009293	CMSS1	90	62.981	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSLACG00000009293	CMSS1	90	62.981	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus