EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009310 (Gene tree)
Gene ID: 102354978
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 84581 bases
Position: chrJH128101.1:410716-495296
Accession: 102354978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010564	MMR_HSR1	PF01926.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010643	-	4314	XM_006007482	ENSLACP00000010564	206 (aa)	XP_006007544	H3ALP3
ENSLACT00000010644	-	555	-	ENSLACP00000010565	184 (aa)	-	H3ALP4

Gene Model

Click here to download ENSLACG00000009310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009310	rab18a	83	39.884	ENSLACG00000016074	RAB39B	81	39.884
ENSLACG00000009310	rab18a	79	37.725	ENSLACG00000008809	zgc:100918	81	37.725
ENSLACG00000009310	rab18a	80	40.120	ENSLACG00000012674	si:dkey-34d22.5	79	40.120
ENSLACG00000009310	rab18a	80	39.157	ENSLACG00000011557	zgc:101559	70	39.157
ENSLACG00000009310	rab18a	79	34.132	ENSLACG00000002523	RAB29	81	34.132
ENSLACG00000009310	rab18a	79	49.390	ENSLACG00000011181	RAB14	76	49.390
ENSLACG00000009310	rab18a	93	41.146	ENSLACG00000011157	RAB25	86	41.146
ENSLACG00000009310	rab18a	74	38.065	ENSLACG00000003722	rabl2	67	38.065
ENSLACG00000009310	rab18a	79	41.104	ENSLACG00000008103	-	92	41.104
ENSLACG00000009310	rab18a	83	35.465	ENSLACG00000004025	RAB23	72	35.465
ENSLACG00000009310	rab18a	82	35.294	ENSLACG00000010042	-	81	35.294
ENSLACG00000009310	rab18a	79	46.951	ENSLACG00000012184	RAB11A	77	47.205
ENSLACG00000009310	rab18a	79	38.922	ENSLACG00000015770	RAB7A	81	38.922
ENSLACG00000009310	rab18a	81	32.530	ENSLACG00000018427	HRAS	88	31.765
ENSLACG00000009310	rab18a	98	31.343	ENSLACG00000018428	NRAS	86	32.927
ENSLACG00000009310	rab18a	89	46.774	ENSLACG00000010461	RAB12	65	49.390
ENSLACG00000009310	rab18a	93	45.876	ENSLACG00000012717	RAB1B	80	50.617
ENSLACG00000009310	rab18a	95	46.890	ENSLACG00000012521	RAB2A	87	49.733
ENSLACG00000009310	rab18a	93	35.204	ENSLACG00000013571	RAB33B	72	39.759
ENSLACG00000009310	rab18a	80	45.181	ENSLACG00000022111	-	83	45.181
ENSLACG00000009310	rab18a	83	39.884	ENSLACG00000002332	-	81	39.884
ENSLACG00000009310	rab18a	72	36.000	ENSLACG00000013122	RRAS2	83	34.911
ENSLACG00000009310	rab18a	81	33.133	ENSLACG00000017464	KRAS	87	33.537
ENSLACG00000009310	rab18a	59	32.787	ENSLACG00000010885	-	80	32.787
ENSLACG00000009310	rab18a	79	39.157	ENSLACG00000017891	RAB9B	78	39.157
ENSLACG00000009310	rab18a	72	32.667	ENSLACG00000017138	RRAS	97	32.544
ENSLACG00000009310	rab18a	73	53.947	ENSLACG00000014446	RAB2B	92	53.947
ENSLACG00000009310	rab18a	60	55.285	ENSLACG00000018444	RAB35	60	55.285
ENSLACG00000009310	rab18a	82	48.521	ENSLACG00000006407	RAB30	83	48.521
ENSLACG00000009310	rab18a	76	32.099	ENSLACG00000012088	rheb	78	34.228
ENSLACG00000009310	rab18a	93	47.692	ENSLACG00000012869	RAB1A	89	47.283
ENSLACG00000009310	rab18a	87	33.333	ENSLACG00000017799	RAB36	59	36.306
ENSLACG00000009310	rab18a	79	32.934	ENSLACG00000012994	DNAJC27	61	33.533
ENSLACG00000009310	rab18a	94	38.119	ENSLACG00000005168	RAB6A	84	39.665
ENSLACG00000009310	rab18a	100	81.553	ENSLACG00000011256	rab18b	92	84.127
ENSLACG00000009310	rab18a	80	42.424	ENSLACG00000007092	RAB22A	85	42.424
ENSLACG00000009310	rab18a	67	34.307	ENSLACG00000018793	RAN	91	34.307
ENSLACG00000009310	rab18a	93	41.837	ENSLACG00000004663	RAB5A	88	41.667
ENSLACG00000009310	rab18a	92	31.771	ENSLACG00000016958	-	90	31.771
ENSLACG00000009310	rab18a	78	46.296	ENSLACG00000011380	rab11al	74	46.296
ENSLACG00000009310	rab18a	83	40.351	ENSLACG00000013980	rab41	79	40.351
ENSLACG00000009310	rab18a	78	47.531	ENSLACG00000016857	-	74	47.531
ENSLACG00000009310	rab18a	72	34.000	ENSLACG00000014985	RAP2B	87	34.783
ENSLACG00000009310	rab18a	79	41.212	ENSLACG00000012755	-	78	41.212
ENSLACG00000009310	rab18a	77	47.799	ENSLACG00000016974	RAB11B	92	47.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009310	rab18a	100	87.864	ENSAPOG00000010760	rab18a	93	90.000	Acanthochromis_polyacanthus
ENSLACG00000009310	rab18a	100	75.243	ENSACIG00000009617	rab18a	92	76.316	Amphilophus_citrinellus
ENSLACG00000009310	rab18a	100	87.379	ENSAOCG00000016233	rab18a	93	89.474	Amphiprion_ocellaris
ENSLACG00000009310	rab18a	100	87.379	ENSAPEG00000005392	rab18a	93	89.474	Amphiprion_percula
ENSLACG00000009310	rab18a	100	88.350	ENSATEG00000021911	rab18a	93	90.526	Anabas_testudineus
ENSLACG00000009310	rab18a	100	95.631	ENSACAG00000005463	-	92	98.413	Anolis_carolinensis
ENSLACG00000009310	rab18a	100	85.922	ENSACLG00000011484	rab18a	93	87.895	Astatotilapia_calliptera
ENSLACG00000009310	rab18a	100	96.602	ENSCPBG00000015839	-	100	96.602	Chrysemys_picta_bellii
ENSLACG00000009310	rab18a	96	71.717	ENSCPBG00000027619	-	92	74.054	Chrysemys_picta_bellii
ENSLACG00000009310	rab18a	97	78.607	ENSCING00000006838	-	96	79.688	Ciona_intestinalis
ENSLACG00000009310	rab18a	97	75.000	ENSCSAVG00000010348	-	96	76.562	Ciona_savignyi
ENSLACG00000009310	rab18a	100	88.350	ENSCSEG00000011816	rab18a	93	91.053	Cynoglossus_semilaevis
ENSLACG00000009310	rab18a	92	88.421	ENSCVAG00000015451	rab18a	93	88.421	Cyprinodon_variegatus
ENSLACG00000009310	rab18a	100	83.495	ENSDARG00000055291	rab18a	94	84.896	Danio_rerio
ENSLACG00000009310	rab18a	100	90.777	ENSELUG00000003805	rab18a	94	93.229	Esox_lucius
ENSLACG00000009310	rab18a	92	88.947	ENSFHEG00000019455	rab18a	93	88.947	Fundulus_heteroclitus
ENSLACG00000009310	rab18a	92	87.895	ENSGAFG00000002790	rab18a	93	87.895	Gambusia_affinis
ENSLACG00000009310	rab18a	100	96.117	ENSGAGG00000015642	-	93	97.917	Gopherus_agassizii
ENSLACG00000009310	rab18a	100	85.922	ENSHBUG00000001518	rab18a	93	87.895	Haplochromis_burtoni
ENSLACG00000009310	rab18a	99	87.317	ENSLBEG00000005861	rab18a	89	88.947	Labrus_bergylta
ENSLACG00000009310	rab18a	100	92.718	ENSLOCG00000007491	rab18a	94	94.792	Lepisosteus_oculatus
ENSLACG00000009310	rab18a	100	88.350	ENSMAMG00000014320	rab18a	93	91.053	Mastacembelus_armatus
ENSLACG00000009310	rab18a	100	85.437	ENSMZEG00005017235	rab18a	93	87.895	Maylandia_zebra
ENSLACG00000009310	rab18a	100	88.835	ENSMALG00000009813	rab18a	93	91.053	Monopterus_albus
ENSLACG00000009310	rab18a	100	85.922	ENSNBRG00000013507	rab18a	93	87.895	Neolamprologus_brichardi
ENSLACG00000009310	rab18a	92	87.368	ENSORLG00000004624	rab18a	93	87.368	Oryzias_latipes
ENSLACG00000009310	rab18a	92	87.895	ENSORLG00020008333	rab18a	93	87.895	Oryzias_latipes_hni
ENSLACG00000009310	rab18a	92	87.368	ENSORLG00015004739	rab18a	93	87.368	Oryzias_latipes_hsok
ENSLACG00000009310	rab18a	92	87.368	ENSOMEG00000020605	rab18a	93	87.368	Oryzias_melastigma
ENSLACG00000009310	rab18a	100	89.320	ENSPKIG00000009825	rab18a	92	92.593	Paramormyrops_kingsleyae
ENSLACG00000009310	rab18a	100	86.408	ENSPMGG00000020409	-	93	87.895	Periophthalmus_magnuspinnatus
ENSLACG00000009310	rab18a	92	88.421	ENSPFOG00000007571	rab18a	93	88.421	Poecilia_formosa
ENSLACG00000009310	rab18a	92	88.421	ENSPLAG00000010104	rab18a	93	88.421	Poecilia_latipinna
ENSLACG00000009310	rab18a	92	88.421	ENSPMEG00000013085	rab18a	93	88.421	Poecilia_mexicana
ENSLACG00000009310	rab18a	92	88.421	ENSPREG00000005923	rab18a	77	88.421	Poecilia_reticulata
ENSLACG00000009310	rab18a	100	85.922	ENSPNYG00000007064	rab18a	93	87.895	Pundamilia_nyererei
ENSLACG00000009310	rab18a	99	83.744	ENSPNAG00000011548	rab18a	95	87.368	Pygocentrus_nattereri
ENSLACG00000009310	rab18a	100	91.748	ENSSFOG00015017444	rab18a	79	93.750	Scleropages_formosus
ENSLACG00000009310	rab18a	92	90.052	ENSSMAG00000002969	rab18a	93	90.052	Scophthalmus_maximus
ENSLACG00000009310	rab18a	92	90.526	ENSSDUG00000003823	rab18a	93	90.526	Seriola_dumerili
ENSLACG00000009310	rab18a	92	90.526	ENSSLDG00000006977	rab18a	93	90.526	Seriola_lalandi_dorsalis
ENSLACG00000009310	rab18a	93	96.875	ENSSPUG00000017677	-	93	96.875	Sphenodon_punctatus
ENSLACG00000009310	rab18a	100	86.408	ENSTRUG00000004984	rab18a	93	88.421	Takifugu_rubripes
ENSLACG00000009310	rab18a	100	94.175	ENSUMAG00000015574	-	93	94.792	Ursus_maritimus
ENSLACG00000009310	rab18a	100	93.689	ENSXETG00000004556	rab18	92	96.316	Xenopus_tropicalis
ENSLACG00000009310	rab18a	92	88.421	ENSXMAG00000024122	rab18a	93	88.421	Xiphophorus_maculatus