EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009328 (Gene tree)
Gene ID: 102348586
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 34163 bases
Position: chrJH126941.1:411988-446150
Accession: 102348586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010587	RRM_1	PF00076.22	2.2e-62	1	4
ENSLACP00000010587	RRM_1	PF00076.22	2.2e-62	2	4
ENSLACP00000010587	RRM_1	PF00076.22	2.2e-62	3	4
ENSLACP00000010587	RRM_1	PF00076.22	2.2e-62	4	4
ENSLACP00000010588	RRM_1	PF00076.22	2.9e-62	1	4
ENSLACP00000010588	RRM_1	PF00076.22	2.9e-62	2	4
ENSLACP00000010588	RRM_1	PF00076.22	2.9e-62	3	4
ENSLACP00000010588	RRM_1	PF00076.22	2.9e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010667	-	2118	-	ENSLACP00000010588	705 (aa)	-	H3ALR7
ENSLACT00000010666	-	2354	XM_005997352	ENSLACP00000010587	662 (aa)	XP_005997414	H3ALR6

Gene Model

Click here to download ENSLACG00000009328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009328	ncl	69	58.252	ENSLACG00000022167	-	81	59.737
ENSLACG00000009328	ncl	54	32.000	ENSLACG00000017828	TIA1	58	32.000
ENSLACG00000009328	ncl	52	31.387	ENSLACG00000011907	PABPC4	56	30.909
ENSLACG00000009328	ncl	51	33.000	ENSLACG00000013628	RBM34	61	33.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009328	ncl	64	60.422	ENSAPOG00000023888	ncl	75	53.188	Acanthochromis_polyacanthus
ENSLACG00000009328	ncl	66	38.493	ENSAPOG00000014534	-	67	40.967	Acanthochromis_polyacanthus
ENSLACG00000009328	ncl	72	64.247	ENSACIG00000013234	ncl	65	62.245	Amphilophus_citrinellus
ENSLACG00000009328	ncl	56	64.987	ENSAOCG00000003133	ncl	59	62.676	Amphiprion_ocellaris
ENSLACG00000009328	ncl	63	39.908	ENSAOCG00000014792	-	61	41.602	Amphiprion_ocellaris
ENSLACG00000009328	ncl	62	61.737	ENSAPEG00000002769	ncl	59	62.295	Amphiprion_percula
ENSLACG00000009328	ncl	63	40.138	ENSAPEG00000013612	-	61	41.860	Amphiprion_percula
ENSLACG00000009328	ncl	56	65.517	ENSATEG00000013343	ncl	60	63.700	Anabas_testudineus
ENSLACG00000009328	ncl	74	40.864	ENSATEG00000019862	-	80	43.766	Anabas_testudineus
ENSLACG00000009328	ncl	63	57.235	ENSAPLG00000012897	-	64	64.599	Anas_platyrhynchos
ENSLACG00000009328	ncl	57	64.781	ENSACAG00000001006	-	53	64.213	Anolis_carolinensis
ENSLACG00000009328	ncl	58	64.401	ENSACLG00000026031	ncl	92	62.059	Astatotilapia_calliptera
ENSLACG00000009328	ncl	64	58.295	ENSAMXG00000001647	ncl	82	66.450	Astyanax_mexicanus
ENSLACG00000009328	ncl	52	43.391	ENSCHIG00000012665	-	62	38.478	Capra_hircus
ENSLACG00000009328	ncl	63	61.400	ENSCPBG00000016444	-	57	67.008	Chrysemys_picta_bellii
ENSLACG00000009328	ncl	73	65.957	ENSCSEG00000015089	ncl	64	64.692	Cynoglossus_semilaevis
ENSLACG00000009328	ncl	53	68.347	ENSCVAG00000012600	ncl	66	62.069	Cyprinodon_variegatus
ENSLACG00000009328	ncl	58	70.096	ENSDARG00000002710	ncl	82	70.032	Danio_rerio
ENSLACG00000009328	ncl	64	44.749	ENSDNOG00000040257	-	61	46.257	Dasypus_novemcinctus
ENSLACG00000009328	ncl	56	46.296	ENSDNOG00000031611	-	67	46.277	Dasypus_novemcinctus
ENSLACG00000009328	ncl	88	49.339	ENSEBUG00000016173	ncl	61	47.890	Eptatretus_burgeri
ENSLACG00000009328	ncl	60	50.754	ENSELUG00000022826	-	84	48.969	Esox_lucius
ENSLACG00000009328	ncl	64	61.098	ENSELUG00000006033	ncl	68	57.589	Esox_lucius
ENSLACG00000009328	ncl	57	63.144	ENSFALG00000007592	-	63	58.929	Ficedula_albicollis
ENSLACG00000009328	ncl	74	63.926	ENSFHEG00000018000	ncl	75	58.161	Fundulus_heteroclitus
ENSLACG00000009328	ncl	69	59.184	ENSGMOG00000001341	ncl	66	60.047	Gadus_morhua
ENSLACG00000009328	ncl	57	64.267	ENSGALG00000032930	NCL	56	64.359	Gallus_gallus
ENSLACG00000009328	ncl	59	30.100	ENSGAFG00000015375	ncl	78	63.208	Gambusia_affinis
ENSLACG00000009328	ncl	62	59.466	ENSGACG00000008970	ncl	66	59.135	Gasterosteus_aculeatus
ENSLACG00000009328	ncl	91	52.496	ENSGAGG00000013330	-	57	66.240	Gopherus_agassizii
ENSLACG00000009328	ncl	71	60.317	ENSHBUG00000006869	ncl	66	60.504	Haplochromis_burtoni
ENSLACG00000009328	ncl	55	63.760	ENSHCOG00000010234	ncl	71	55.283	Hippocampus_comes
ENSLACG00000009328	ncl	58	67.089	ENSIPUG00000024556	ncl	84	67.628	Ictalurus_punctatus
ENSLACG00000009328	ncl	62	64.337	ENSKMAG00000008111	ncl	78	58.559	Kryptolebias_marmoratus
ENSLACG00000009328	ncl	69	40.598	ENSLBEG00000007915	-	66	43.544	Labrus_bergylta
ENSLACG00000009328	ncl	62	63.333	ENSLBEG00000019073	ncl	62	63.357	Labrus_bergylta
ENSLACG00000009328	ncl	57	41.645	ENSLBEG00000014278	-	82	42.818	Labrus_bergylta
ENSLACG00000009328	ncl	72	61.096	ENSLOCG00000004828	ncl	79	59.353	Lepisosteus_oculatus
ENSLACG00000009328	ncl	80	38.926	ENSMAMG00000003479	-	68	41.053	Mastacembelus_armatus
ENSLACG00000009328	ncl	56	66.133	ENSMAMG00000002086	ncl	51	64.019	Mastacembelus_armatus
ENSLACG00000009328	ncl	57	64.362	ENSMZEG00005017438	ncl	66	60.738	Maylandia_zebra
ENSLACG00000009328	ncl	53	67.532	ENSMGAG00000008147	-	82	67.521	Meleagris_gallopavo
ENSLACG00000009328	ncl	50	70.000	ENSMMOG00000008553	ncl	89	68.343	Mola_mola
ENSLACG00000009328	ncl	56	62.982	ENSMODG00000002470	-	54	62.916	Monodelphis_domestica
ENSLACG00000009328	ncl	58	62.406	ENSMALG00000014827	ncl	57	63.452	Monopterus_albus
ENSLACG00000009328	ncl	53	41.100	ENSMPUG00000001663	-	57	41.346	Mustela_putorius_furo
ENSLACG00000009328	ncl	53	65.505	ENSNBRG00000000146	-	82	66.667	Neolamprologus_brichardi
ENSLACG00000009328	ncl	52	65.734	ENSNBRG00000001232	ncl	79	66.431	Neolamprologus_brichardi
ENSLACG00000009328	ncl	57	31.738	ENSMEUG00000012335	-	55	62.532	Notamacropus_eugenii
ENSLACG00000009328	ncl	57	37.008	ENSONIG00000010631	-	97	37.008	Oreochromis_niloticus
ENSLACG00000009328	ncl	57	64.628	ENSONIG00000012508	ncl	59	63.270	Oreochromis_niloticus
ENSLACG00000009328	ncl	76	63.472	ENSOANG00000008732	-	61	63.472	Ornithorhynchus_anatinus
ENSLACG00000009328	ncl	61	36.957	ENSORLG00000004645	-	85	38.303	Oryzias_latipes
ENSLACG00000009328	ncl	72	65.278	ENSORLG00020017943	ncl	57	62.972	Oryzias_latipes_hni
ENSLACG00000009328	ncl	57	38.974	ENSORLG00020003497	-	72	40.217	Oryzias_latipes_hni
ENSLACG00000009328	ncl	71	59.390	ENSORLG00015013815	ncl	89	67.203	Oryzias_latipes_hsok
ENSLACG00000009328	ncl	65	35.967	ENSORLG00015006613	-	79	39.332	Oryzias_latipes_hsok
ENSLACG00000009328	ncl	73	65.301	ENSOMEG00000020786	ncl	81	52.265	Oryzias_melastigma
ENSLACG00000009328	ncl	57	37.722	ENSOMEG00000015864	-	80	37.968	Oryzias_melastigma
ENSLACG00000009328	ncl	62	62.736	ENSPKIG00000002604	ncl	59	63.380	Paramormyrops_kingsleyae
ENSLACG00000009328	ncl	58	66.450	ENSPMGG00000004709	ncl	79	66.238	Periophthalmus_magnuspinnatus
ENSLACG00000009328	ncl	78	38.462	ENSPMAG00000003855	ncl	64	40.278	Petromyzon_marinus
ENSLACG00000009328	ncl	56	61.697	ENSPCIG00000003293	-	54	61.637	Phascolarctos_cinereus
ENSLACG00000009328	ncl	53	64.021	ENSPFOG00000024205	ncl	78	63.466	Poecilia_formosa
ENSLACG00000009328	ncl	55	65.027	ENSPLAG00000024026	ncl	78	63.208	Poecilia_latipinna
ENSLACG00000009328	ncl	55	64.754	ENSPMEG00000006000	ncl	78	63.208	Poecilia_mexicana
ENSLACG00000009328	ncl	57	64.362	ENSPNYG00000020494	ncl	60	63.033	Pundamilia_nyererei
ENSLACG00000009328	ncl	63	64.055	ENSPNAG00000006192	ncl	58	64.120	Pygocentrus_nattereri
ENSLACG00000009328	ncl	56	57.480	ENSSHAG00000002702	-	60	57.106	Sarcophilus_harrisii
ENSLACG00000009328	ncl	56	68.338	ENSSFOG00015008583	ncl	73	62.839	Scleropages_formosus
ENSLACG00000009328	ncl	62	61.737	ENSSMAG00000021241	ncl	60	61.882	Scophthalmus_maximus
ENSLACG00000009328	ncl	82	38.188	ENSSMAG00000007582	-	62	45.128	Scophthalmus_maximus
ENSLACG00000009328	ncl	69	40.042	ENSSDUG00000010922	-	72	43.257	Seriola_dumerili
ENSLACG00000009328	ncl	73	61.751	ENSSDUG00000006128	ncl	85	65.517	Seriola_dumerili
ENSLACG00000009328	ncl	63	62.269	ENSSLDG00000002012	ncl	65	60.211	Seriola_lalandi_dorsalis
ENSLACG00000009328	ncl	59	43.392	ENSSLDG00000015784	-	66	43.669	Seriola_lalandi_dorsalis
ENSLACG00000009328	ncl	58	60.880	ENSSPUG00000008244	-	61	61.845	Sphenodon_punctatus
ENSLACG00000009328	ncl	77	41.686	ENSSPAG00000001859	-	61	43.386	Stegastes_partitus
ENSLACG00000009328	ncl	54	67.254	ENSSPAG00000002637	ncl	83	67.361	Stegastes_partitus
ENSLACG00000009328	ncl	62	59.910	ENSTGUG00000009782	-	70	60.356	Taeniopygia_guttata
ENSLACG00000009328	ncl	62	62.353	ENSTRUG00000008185	ncl	62	62.763	Takifugu_rubripes
ENSLACG00000009328	ncl	54	67.222	ENSTNIG00000012186	ncl	69	62.175	Tetraodon_nigroviridis
ENSLACG00000009328	ncl	56	66.053	ENSXETG00000009517	ncl	62	60.000	Xenopus_tropicalis
ENSLACG00000009328	ncl	56	41.207	ENSXCOG00000007369	-	91	41.207	Xiphophorus_couchianus
ENSLACG00000009328	ncl	59	42.769	ENSXCOG00000003524	ncl	87	52.997	Xiphophorus_couchianus
ENSLACG00000009328	ncl	72	66.310	ENSXMAG00000005914	ncl	58	63.403	Xiphophorus_maculatus