EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009371 (Gene tree)
Gene ID: 102357081
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 37984 bases
Position: chrJH126704.1:415390-453373
Accession: 102357081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010638	RNA_pol_Rpc34	PF05158.12	9.4e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010717	POLR3F-201	2450	XM_005992915	ENSLACP00000010638	314 (aa)	XP_005992977	H3ALW7

Gene Model

Click here to download ENSLACG00000009371's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03020	RNA polymerase	KEGG
lcm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009371	POLR3F	100	89.873	ENSG00000132664	POLR3F	100	89.873	Homo_sapiens
ENSLACG00000009371	POLR3F	100	86.392	ENSAPOG00000008271	polr3f	100	86.392	Acanthochromis_polyacanthus
ENSLACG00000009371	POLR3F	100	90.190	ENSAMEG00000005222	POLR3F	100	90.190	Ailuropoda_melanoleuca
ENSLACG00000009371	POLR3F	100	82.166	ENSACIG00000006705	polr3f	100	82.166	Amphilophus_citrinellus
ENSLACG00000009371	POLR3F	100	87.025	ENSAOCG00000000687	polr3f	100	87.025	Amphiprion_ocellaris
ENSLACG00000009371	POLR3F	100	86.709	ENSAPEG00000015263	polr3f	100	86.709	Amphiprion_percula
ENSLACG00000009371	POLR3F	88	90.545	ENSATEG00000015539	polr3f	100	90.545	Anabas_testudineus
ENSLACG00000009371	POLR3F	88	92.364	ENSAPLG00000005533	POLR3F	100	92.364	Anas_platyrhynchos
ENSLACG00000009371	POLR3F	98	88.673	ENSACAG00000014293	POLR3F	99	88.673	Anolis_carolinensis
ENSLACG00000009371	POLR3F	100	90.190	ENSANAG00000026726	POLR3F	100	90.190	Aotus_nancymaae
ENSLACG00000009371	POLR3F	100	87.658	ENSACLG00000003615	polr3f	100	87.658	Astatotilapia_calliptera
ENSLACG00000009371	POLR3F	100	89.809	ENSAMXG00000036020	polr3f	100	89.809	Astyanax_mexicanus
ENSLACG00000009371	POLR3F	100	89.873	ENSBTAG00000008825	POLR3F	100	89.873	Bos_taurus
ENSLACG00000009371	POLR3F	98	33.117	WBGene00021112	W09C3.4	98	33.117	Caenorhabditis_elegans
ENSLACG00000009371	POLR3F	100	90.190	ENSCJAG00000005159	POLR3F	100	90.190	Callithrix_jacchus
ENSLACG00000009371	POLR3F	100	90.190	ENSCAFG00000005420	POLR3F	100	90.190	Canis_familiaris
ENSLACG00000009371	POLR3F	100	90.190	ENSCAFG00020027500	POLR3F	100	90.190	Canis_lupus_dingo
ENSLACG00000009371	POLR3F	100	89.873	ENSCHIG00000014743	POLR3F	100	89.873	Capra_hircus
ENSLACG00000009371	POLR3F	100	89.873	ENSTSYG00000004207	POLR3F	100	89.873	Carlito_syrichta
ENSLACG00000009371	POLR3F	94	52.703	ENSCAPG00000008423	POLR3F	100	52.703	Cavia_aperea
ENSLACG00000009371	POLR3F	100	89.557	ENSCPOG00000002400	POLR3F	100	89.557	Cavia_porcellus
ENSLACG00000009371	POLR3F	100	80.696	ENSCCAG00000021800	POLR3F	100	80.696	Cebus_capucinus
ENSLACG00000009371	POLR3F	100	89.557	ENSCATG00000019507	POLR3F	100	89.557	Cercocebus_atys
ENSLACG00000009371	POLR3F	100	89.557	ENSCLAG00000016296	POLR3F	100	89.557	Chinchilla_lanigera
ENSLACG00000009371	POLR3F	100	89.557	ENSCSAG00000011513	POLR3F	100	89.557	Chlorocebus_sabaeus
ENSLACG00000009371	POLR3F	73	93.258	ENSCHOG00000013268	POLR3F	73	93.258	Choloepus_hoffmanni
ENSLACG00000009371	POLR3F	88	92.364	ENSCPBG00000023473	POLR3F	100	92.364	Chrysemys_picta_bellii
ENSLACG00000009371	POLR3F	99	62.420	ENSCING00000001212	-	99	62.420	Ciona_intestinalis
ENSLACG00000009371	POLR3F	71	61.435	ENSCSAVG00000003340	-	96	66.864	Ciona_savignyi
ENSLACG00000009371	POLR3F	92	89.347	ENSCANG00000037390	POLR3F	100	89.347	Colobus_angolensis_palliatus
ENSLACG00000009371	POLR3F	100	89.557	ENSCGRG00001002032	Polr3f	100	89.557	Cricetulus_griseus_chok1gshd
ENSLACG00000009371	POLR3F	100	89.557	ENSCGRG00000010852	Polr3f	100	89.557	Cricetulus_griseus_crigri
ENSLACG00000009371	POLR3F	100	85.443	ENSCSEG00000001247	polr3f	100	85.443	Cynoglossus_semilaevis
ENSLACG00000009371	POLR3F	100	84.494	ENSCVAG00000007611	polr3f	100	84.494	Cyprinodon_variegatus
ENSLACG00000009371	POLR3F	100	89.809	ENSDARG00000012572	polr3f	100	89.809	Danio_rerio
ENSLACG00000009371	POLR3F	99	87.781	ENSDNOG00000010719	POLR3F	98	87.781	Dasypus_novemcinctus
ENSLACG00000009371	POLR3F	100	89.557	ENSDORG00000016352	Polr3f	100	89.557	Dipodomys_ordii
ENSLACG00000009371	POLR3F	94	49.492	FBgn0038951	CG5380	97	49.492	Drosophila_melanogaster
ENSLACG00000009371	POLR3F	86	56.296	ENSETEG00000015485	-	96	56.296	Echinops_telfairi
ENSLACG00000009371	POLR3F	100	76.433	ENSEBUG00000006783	polr3f	100	76.433	Eptatretus_burgeri
ENSLACG00000009371	POLR3F	100	89.873	ENSEASG00005002022	POLR3F	100	89.873	Equus_asinus_asinus
ENSLACG00000009371	POLR3F	100	89.873	ENSECAG00000009920	POLR3F	100	89.873	Equus_caballus
ENSLACG00000009371	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSLACG00000009371	POLR3F	100	89.809	ENSELUG00000001558	polr3f	100	89.809	Esox_lucius
ENSLACG00000009371	POLR3F	100	90.190	ENSFCAG00000013828	POLR3F	100	90.190	Felis_catus
ENSLACG00000009371	POLR3F	88	92.727	ENSFALG00000007623	POLR3F	100	92.727	Ficedula_albicollis
ENSLACG00000009371	POLR3F	100	89.241	ENSFDAG00000002528	POLR3F	100	89.241	Fukomys_damarensis
ENSLACG00000009371	POLR3F	100	84.494	ENSFHEG00000006450	polr3f	100	84.494	Fundulus_heteroclitus
ENSLACG00000009371	POLR3F	100	91.401	ENSGALG00000008749	POLR3F	100	91.401	Gallus_gallus
ENSLACG00000009371	POLR3F	100	86.076	ENSGAFG00000003698	polr3f	100	86.076	Gambusia_affinis
ENSLACG00000009371	POLR3F	100	90.446	ENSGAGG00000006151	POLR3F	100	90.446	Gopherus_agassizii
ENSLACG00000009371	POLR3F	100	89.873	ENSGGOG00000011543	POLR3F	100	89.873	Gorilla_gorilla
ENSLACG00000009371	POLR3F	100	87.658	ENSHBUG00000013806	polr3f	100	87.658	Haplochromis_burtoni
ENSLACG00000009371	POLR3F	100	89.241	ENSHGLG00000011867	POLR3F	100	89.241	Heterocephalus_glaber_female
ENSLACG00000009371	POLR3F	100	89.241	ENSHGLG00100012577	POLR3F	100	89.241	Heterocephalus_glaber_male
ENSLACG00000009371	POLR3F	100	76.899	ENSHCOG00000011751	polr3f	100	76.899	Hippocampus_comes
ENSLACG00000009371	POLR3F	100	89.490	ENSIPUG00000013347	polr3f	100	89.490	Ictalurus_punctatus
ENSLACG00000009371	POLR3F	100	90.190	ENSSTOG00000013588	POLR3F	100	90.190	Ictidomys_tridecemlineatus
ENSLACG00000009371	POLR3F	100	89.557	ENSJJAG00000017513	Polr3f	100	89.557	Jaculus_jaculus
ENSLACG00000009371	POLR3F	88	82.909	ENSKMAG00000016495	polr3f	100	82.909	Kryptolebias_marmoratus
ENSLACG00000009371	POLR3F	74	93.966	ENSLBEG00000011998	polr3f	100	93.966	Labrus_bergylta
ENSLACG00000009371	POLR3F	100	92.038	ENSLOCG00000015701	polr3f	100	92.038	Lepisosteus_oculatus
ENSLACG00000009371	POLR3F	100	89.557	ENSLAFG00000004929	POLR3F	100	89.557	Loxodonta_africana
ENSLACG00000009371	POLR3F	100	89.557	ENSMFAG00000002227	POLR3F	100	89.557	Macaca_fascicularis
ENSLACG00000009371	POLR3F	88	92.000	ENSMMUG00000004143	POLR3F	100	92.000	Macaca_mulatta
ENSLACG00000009371	POLR3F	100	89.557	ENSMNEG00000033404	POLR3F	100	89.557	Macaca_nemestrina
ENSLACG00000009371	POLR3F	100	89.557	ENSMLEG00000021905	POLR3F	100	89.557	Mandrillus_leucophaeus
ENSLACG00000009371	POLR3F	100	85.759	ENSMAMG00000017975	polr3f	100	85.759	Mastacembelus_armatus
ENSLACG00000009371	POLR3F	100	87.975	ENSMZEG00005015134	polr3f	100	87.975	Maylandia_zebra
ENSLACG00000009371	POLR3F	100	90.764	ENSMGAG00000006691	POLR3F	100	90.764	Meleagris_gallopavo
ENSLACG00000009371	POLR3F	100	89.557	ENSMAUG00000020176	Polr3f	100	89.557	Mesocricetus_auratus
ENSLACG00000009371	POLR3F	100	89.557	ENSMICG00000044519	POLR3F	100	89.557	Microcebus_murinus
ENSLACG00000009371	POLR3F	100	89.873	ENSMOCG00000018352	Polr3f	100	89.873	Microtus_ochrogaster
ENSLACG00000009371	POLR3F	94	89.562	ENSMMOG00000018477	polr3f	100	89.562	Mola_mola
ENSLACG00000009371	POLR3F	100	89.557	ENSMODG00000005624	POLR3F	100	89.557	Monodelphis_domestica
ENSLACG00000009371	POLR3F	100	87.025	ENSMALG00000006685	polr3f	100	87.025	Monopterus_albus
ENSLACG00000009371	POLR3F	100	89.241	MGP_CAROLIEiJ_G0024385	Polr3f	100	89.241	Mus_caroli
ENSLACG00000009371	POLR3F	100	89.241	ENSMUSG00000027427	Polr3f	100	89.241	Mus_musculus
ENSLACG00000009371	POLR3F	100	89.241	MGP_PahariEiJ_G0025829	Polr3f	100	89.241	Mus_pahari
ENSLACG00000009371	POLR3F	100	89.241	MGP_SPRETEiJ_G0025304	Polr3f	100	89.241	Mus_spretus
ENSLACG00000009371	POLR3F	100	69.846	ENSMPUG00000001252	-	100	69.846	Mustela_putorius_furo
ENSLACG00000009371	POLR3F	100	90.190	ENSMLUG00000014844	POLR3F	100	90.190	Myotis_lucifugus
ENSLACG00000009371	POLR3F	100	88.924	ENSNGAG00000010898	Polr3f	100	88.924	Nannospalax_galili
ENSLACG00000009371	POLR3F	100	87.975	ENSNBRG00000020796	polr3f	100	87.975	Neolamprologus_brichardi
ENSLACG00000009371	POLR3F	100	89.873	ENSNLEG00000009778	POLR3F	100	89.873	Nomascus_leucogenys
ENSLACG00000009371	POLR3F	94	86.441	ENSMEUG00000010320	POLR3F	100	86.441	Notamacropus_eugenii
ENSLACG00000009371	POLR3F	100	87.975	ENSOPRG00000003385	POLR3F	100	87.975	Ochotona_princeps
ENSLACG00000009371	POLR3F	100	89.241	ENSODEG00000011521	POLR3F	100	89.241	Octodon_degus
ENSLACG00000009371	POLR3F	100	86.392	ENSONIG00000006858	polr3f	100	86.392	Oreochromis_niloticus
ENSLACG00000009371	POLR3F	100	90.190	ENSOANG00000001253	POLR3F	100	90.190	Ornithorhynchus_anatinus
ENSLACG00000009371	POLR3F	100	89.241	ENSOCUG00000015067	POLR3F	100	89.241	Oryctolagus_cuniculus
ENSLACG00000009371	POLR3F	100	84.177	ENSORLG00000022412	polr3f	100	84.177	Oryzias_latipes
ENSLACG00000009371	POLR3F	100	84.177	ENSORLG00020021944	polr3f	100	84.177	Oryzias_latipes_hni
ENSLACG00000009371	POLR3F	100	88.608	ENSOGAG00000002916	POLR3F	100	88.608	Otolemur_garnettii
ENSLACG00000009371	POLR3F	100	54.430	ENSOARG00000008647	-	100	54.430	Ovis_aries
ENSLACG00000009371	POLR3F	100	89.873	ENSOARG00000000315	-	100	89.873	Ovis_aries
ENSLACG00000009371	POLR3F	100	89.873	ENSPPAG00000036681	POLR3F	100	89.873	Pan_paniscus
ENSLACG00000009371	POLR3F	100	90.190	ENSPPRG00000024604	POLR3F	100	90.190	Panthera_pardus
ENSLACG00000009371	POLR3F	100	90.190	ENSPTIG00000020292	POLR3F	100	90.190	Panthera_tigris_altaica
ENSLACG00000009371	POLR3F	100	89.873	ENSPTRG00000013287	POLR3F	100	89.873	Pan_troglodytes
ENSLACG00000009371	POLR3F	100	89.557	ENSPANG00000025015	POLR3F	100	89.557	Papio_anubis
ENSLACG00000009371	POLR3F	100	90.446	ENSPKIG00000004427	polr3f	100	90.446	Paramormyrops_kingsleyae
ENSLACG00000009371	POLR3F	88	93.818	ENSPSIG00000016613	POLR3F	100	93.818	Pelodiscus_sinensis
ENSLACG00000009371	POLR3F	100	51.266	ENSPMGG00000018350	polr3f	100	56.329	Periophthalmus_magnuspinnatus
ENSLACG00000009371	POLR3F	100	90.190	ENSPEMG00000006966	Polr3f	100	90.190	Peromyscus_maniculatus_bairdii
ENSLACG00000009371	POLR3F	100	82.484	ENSPMAG00000005530	polr3f	100	82.484	Petromyzon_marinus
ENSLACG00000009371	POLR3F	100	89.241	ENSPCIG00000000908	POLR3F	85	89.241	Phascolarctos_cinereus
ENSLACG00000009371	POLR3F	100	85.443	ENSPFOG00000018334	polr3f	100	85.443	Poecilia_formosa
ENSLACG00000009371	POLR3F	100	85.443	ENSPLAG00000021803	polr3f	100	85.443	Poecilia_latipinna
ENSLACG00000009371	POLR3F	100	85.443	ENSPMEG00000013150	polr3f	100	85.443	Poecilia_mexicana
ENSLACG00000009371	POLR3F	100	85.443	ENSPREG00000005278	polr3f	100	85.443	Poecilia_reticulata
ENSLACG00000009371	POLR3F	100	89.873	ENSPPYG00000010737	POLR3F	100	89.873	Pongo_abelii
ENSLACG00000009371	POLR3F	66	91.892	ENSPCAG00000004893	POLR3F	71	91.892	Procavia_capensis
ENSLACG00000009371	POLR3F	100	89.557	ENSPCOG00000004543	POLR3F	100	89.557	Propithecus_coquereli
ENSLACG00000009371	POLR3F	100	89.873	ENSPVAG00000000403	POLR3F	100	89.873	Pteropus_vampyrus
ENSLACG00000009371	POLR3F	100	87.658	ENSPNYG00000016276	polr3f	100	87.658	Pundamilia_nyererei
ENSLACG00000009371	POLR3F	100	91.401	ENSPNAG00000005164	polr3f	100	91.401	Pygocentrus_nattereri
ENSLACG00000009371	POLR3F	100	88.924	ENSRNOG00000007548	Polr3f	85	88.924	Rattus_norvegicus
ENSLACG00000009371	POLR3F	100	89.557	ENSRBIG00000021268	POLR3F	100	89.557	Rhinopithecus_bieti
ENSLACG00000009371	POLR3F	100	89.557	ENSRROG00000039911	POLR3F	100	89.557	Rhinopithecus_roxellana
ENSLACG00000009371	POLR3F	69	30.088	YNR003C	RPC34	71	30.088	Saccharomyces_cerevisiae
ENSLACG00000009371	POLR3F	100	90.190	ENSSBOG00000018207	POLR3F	100	90.190	Saimiri_boliviensis_boliviensis
ENSLACG00000009371	POLR3F	100	70.347	ENSSHAG00000018160	POLR3F	100	70.347	Sarcophilus_harrisii
ENSLACG00000009371	POLR3F	100	91.720	ENSSFOG00015022433	polr3f	100	91.720	Scleropages_formosus
ENSLACG00000009371	POLR3F	100	85.443	ENSSMAG00000021029	polr3f	100	85.443	Scophthalmus_maximus
ENSLACG00000009371	POLR3F	100	77.215	ENSSDUG00000022435	polr3f	100	77.215	Seriola_dumerili
ENSLACG00000009371	POLR3F	100	86.392	ENSSLDG00000012761	polr3f	100	86.392	Seriola_lalandi_dorsalis
ENSLACG00000009371	POLR3F	100	81.329	ENSSARG00000006039	POLR3F	100	81.329	Sorex_araneus
ENSLACG00000009371	POLR3F	100	90.446	ENSSPUG00000001873	POLR3F	100	90.446	Sphenodon_punctatus
ENSLACG00000009371	POLR3F	100	79.114	ENSSPAG00000002092	polr3f	100	79.114	Stegastes_partitus
ENSLACG00000009371	POLR3F	100	89.873	ENSSSCG00000007095	POLR3F	100	93.966	Sus_scrofa
ENSLACG00000009371	POLR3F	100	90.764	ENSTGUG00000005839	POLR3F	100	90.764	Taeniopygia_guttata
ENSLACG00000009371	POLR3F	100	85.127	ENSTRUG00000012101	polr3f	100	85.127	Takifugu_rubripes
ENSLACG00000009371	POLR3F	100	83.544	ENSTNIG00000006456	polr3f	100	83.544	Tetraodon_nigroviridis
ENSLACG00000009371	POLR3F	100	73.734	ENSTBEG00000007921	POLR3F	100	73.734	Tupaia_belangeri
ENSLACG00000009371	POLR3F	100	89.873	ENSTTRG00000002580	POLR3F	100	89.873	Tursiops_truncatus
ENSLACG00000009371	POLR3F	53	91.566	ENSUAMG00000024166	POLR3F	100	91.566	Ursus_americanus
ENSLACG00000009371	POLR3F	100	89.873	ENSUMAG00000024944	POLR3F	100	89.873	Ursus_maritimus
ENSLACG00000009371	POLR3F	100	89.873	ENSVPAG00000009063	POLR3F	100	89.873	Vicugna_pacos
ENSLACG00000009371	POLR3F	100	90.190	ENSVVUG00000012925	POLR3F	100	90.190	Vulpes_vulpes
ENSLACG00000009371	POLR3F	100	88.535	ENSXETG00000024898	polr3f	100	88.535	Xenopus_tropicalis
ENSLACG00000009371	POLR3F	88	89.455	ENSXCOG00000010301	polr3f	100	89.455	Xiphophorus_couchianus
ENSLACG00000009371	POLR3F	100	85.759	ENSXMAG00000004604	polr3f	100	85.759	Xiphophorus_maculatus