EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009497 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 20116 bases
Position: chrJH127282.1:425900-446015
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010786	tRNA_int_end_N2	PF12928.7	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010866	TSEN54-201	1551	-	ENSLACP00000010786	516 (aa)	-	H3AMB5

Gene Model

Click here to download ENSLACG00000009497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009497	TSEN54	100	47.692	ENSG00000182173	TSEN54	99	63.380	Homo_sapiens
ENSLACG00000009497	TSEN54	99	44.068	ENSAPOG00000009659	tsen54	99	42.601	Acanthochromis_polyacanthus
ENSLACG00000009497	TSEN54	99	45.298	ENSAMEG00000009414	TSEN54	96	45.681	Ailuropoda_melanoleuca
ENSLACG00000009497	TSEN54	99	43.977	ENSAOCG00000000152	tsen54	95	43.977	Amphiprion_ocellaris
ENSLACG00000009497	TSEN54	99	43.977	ENSAPEG00000018931	tsen54	94	43.977	Amphiprion_percula
ENSLACG00000009497	TSEN54	99	42.529	ENSATEG00000019860	tsen54	97	42.912	Anabas_testudineus
ENSLACG00000009497	TSEN54	88	43.710	ENSAPLG00000009419	TSEN54	99	43.710	Anas_platyrhynchos
ENSLACG00000009497	TSEN54	99	44.847	ENSACAG00000006714	TSEN54	97	45.333	Anolis_carolinensis
ENSLACG00000009497	TSEN54	100	47.308	ENSANAG00000024061	TSEN54	96	48.069	Aotus_nancymaae
ENSLACG00000009497	TSEN54	99	42.610	ENSACLG00000019800	tsen54	96	43.378	Astatotilapia_calliptera
ENSLACG00000009497	TSEN54	99	43.462	ENSAMXG00000006546	tsen54	96	43.462	Astyanax_mexicanus
ENSLACG00000009497	TSEN54	100	44.906	ENSBTAG00000000824	TSEN54	97	45.966	Bos_taurus
ENSLACG00000009497	TSEN54	100	47.115	ENSCJAG00000014278	TSEN54	96	47.876	Callithrix_jacchus
ENSLACG00000009497	TSEN54	100	46.300	ENSCAFG00000004798	TSEN54	97	46.869	Canis_familiaris
ENSLACG00000009497	TSEN54	100	46.300	ENSCAFG00020000312	TSEN54	97	46.869	Canis_lupus_dingo
ENSLACG00000009497	TSEN54	100	46.604	ENSCHIG00000019908	TSEN54	97	46.792	Capra_hircus
ENSLACG00000009497	TSEN54	89	42.581	ENSTSYG00000037439	TSEN54	99	43.011	Carlito_syrichta
ENSLACG00000009497	TSEN54	100	47.490	ENSCCAG00000036624	TSEN54	96	47.490	Cebus_capucinus
ENSLACG00000009497	TSEN54	100	48.649	ENSCATG00000042877	TSEN54	96	48.649	Cercocebus_atys
ENSLACG00000009497	TSEN54	100	49.425	ENSCLAG00000002924	TSEN54	96	49.425	Chinchilla_lanigera
ENSLACG00000009497	TSEN54	100	47.500	ENSCSAG00000004809	TSEN54	97	48.456	Chlorocebus_sabaeus
ENSLACG00000009497	TSEN54	100	48.381	ENSCPBG00000028071	TSEN54	98	48.381	Chrysemys_picta_bellii
ENSLACG00000009497	TSEN54	100	48.375	ENSCANG00000028053	TSEN54	97	48.375	Colobus_angolensis_palliatus
ENSLACG00000009497	TSEN54	100	46.125	ENSCGRG00001020029	Tsen54	97	46.125	Cricetulus_griseus_chok1gshd
ENSLACG00000009497	TSEN54	86	43.231	ENSCGRG00000016289	Tsen54	99	43.231	Cricetulus_griseus_crigri
ENSLACG00000009497	TSEN54	83	37.071	ENSCSEG00000020586	tsen54	99	37.071	Cynoglossus_semilaevis
ENSLACG00000009497	TSEN54	83	40.000	ENSDARG00000036844	tsen54	100	40.690	Danio_rerio
ENSLACG00000009497	TSEN54	100	44.762	ENSDNOG00000018452	TSEN54	97	44.340	Dasypus_novemcinctus
ENSLACG00000009497	TSEN54	100	46.833	ENSDORG00000004073	Tsen54	97	47.409	Dipodomys_ordii
ENSLACG00000009497	TSEN54	99	30.654	ENSEBUG00000005203	TSEN54	95	30.654	Eptatretus_burgeri
ENSLACG00000009497	TSEN54	100	46.927	ENSEASG00005000579	TSEN54	97	46.927	Equus_asinus_asinus
ENSLACG00000009497	TSEN54	100	46.927	ENSECAG00000004924	TSEN54	97	46.927	Equus_caballus
ENSLACG00000009497	TSEN54	89	41.772	ENSEEUG00000008467	TSEN54	99	42.553	Erinaceus_europaeus
ENSLACG00000009497	TSEN54	99	38.208	ENSELUG00000017703	tsen54	90	38.208	Esox_lucius
ENSLACG00000009497	TSEN54	100	45.489	ENSFCAG00000023712	TSEN54	97	45.865	Felis_catus
ENSLACG00000009497	TSEN54	99	45.631	ENSFALG00000001119	TSEN54	95	45.631	Ficedula_albicollis
ENSLACG00000009497	TSEN54	88	43.197	ENSFDAG00000019090	TSEN54	99	43.197	Fukomys_damarensis
ENSLACG00000009497	TSEN54	99	42.775	ENSFHEG00000005470	tsen54	96	42.775	Fundulus_heteroclitus
ENSLACG00000009497	TSEN54	85	45.545	ENSGMOG00000013146	tsen54	99	45.545	Gadus_morhua
ENSLACG00000009497	TSEN54	97	43.023	ENSGALG00000047163	TSEN54	97	43.023	Gallus_gallus
ENSLACG00000009497	TSEN54	99	42.166	ENSGAFG00000005111	tsen54	96	42.166	Gambusia_affinis
ENSLACG00000009497	TSEN54	99	39.231	ENSGACG00000014987	tsen54	99	39.539	Gasterosteus_aculeatus
ENSLACG00000009497	TSEN54	100	50.667	ENSGAGG00000006825	TSEN54	96	50.667	Gopherus_agassizii
ENSLACG00000009497	TSEN54	99	47.592	ENSGGOG00000009417	TSEN54	99	48.638	Gorilla_gorilla
ENSLACG00000009497	TSEN54	89	40.043	ENSHBUG00000018296	tsen54	98	34.917	Haplochromis_burtoni
ENSLACG00000009497	TSEN54	100	47.601	ENSHGLG00000007979	TSEN54	97	47.601	Heterocephalus_glaber_female
ENSLACG00000009497	TSEN54	100	46.641	ENSHGLG00100005497	TSEN54	97	46.641	Heterocephalus_glaber_male
ENSLACG00000009497	TSEN54	83	40.590	ENSHCOG00000007481	tsen54	99	40.590	Hippocampus_comes
ENSLACG00000009497	TSEN54	99	36.873	ENSIPUG00000000590	tsen54	96	36.873	Ictalurus_punctatus
ENSLACG00000009497	TSEN54	100	46.374	ENSSTOG00000012883	TSEN54	97	46.374	Ictidomys_tridecemlineatus
ENSLACG00000009497	TSEN54	100	46.970	ENSJJAG00000007365	Tsen54	97	46.970	Jaculus_jaculus
ENSLACG00000009497	TSEN54	99	42.533	ENSKMAG00000006944	tsen54	97	42.533	Kryptolebias_marmoratus
ENSLACG00000009497	TSEN54	99	40.192	ENSLBEG00000004199	tsen54	97	40.000	Labrus_bergylta
ENSLACG00000009497	TSEN54	100	43.478	ENSLOCG00000011191	tsen54	96	43.289	Lepisosteus_oculatus
ENSLACG00000009497	TSEN54	95	44.223	ENSLAFG00000011655	TSEN54	92	44.489	Loxodonta_africana
ENSLACG00000009497	TSEN54	100	47.885	ENSMFAG00000000712	TSEN54	97	48.842	Macaca_fascicularis
ENSLACG00000009497	TSEN54	100	47.885	ENSMNEG00000029199	TSEN54	97	48.842	Macaca_nemestrina
ENSLACG00000009497	TSEN54	89	44.469	ENSMLEG00000044168	TSEN54	88	45.534	Mandrillus_leucophaeus
ENSLACG00000009497	TSEN54	99	44.444	ENSMAMG00000019773	tsen54	97	44.444	Mastacembelus_armatus
ENSLACG00000009497	TSEN54	99	42.418	ENSMZEG00005000884	tsen54	96	43.186	Maylandia_zebra
ENSLACG00000009497	TSEN54	99	44.213	ENSMGAG00000009556	TSEN54	97	44.213	Meleagris_gallopavo
ENSLACG00000009497	TSEN54	100	45.731	ENSMAUG00000016838	Tsen54	97	45.731	Mesocricetus_auratus
ENSLACG00000009497	TSEN54	100	46.923	ENSMICG00000044012	TSEN54	97	47.784	Microcebus_murinus
ENSLACG00000009497	TSEN54	100	44.592	ENSMOCG00000021585	Tsen54	97	44.592	Microtus_ochrogaster
ENSLACG00000009497	TSEN54	99	39.847	ENSMMOG00000020189	tsen54	99	41.154	Mola_mola
ENSLACG00000009497	TSEN54	100	45.287	ENSMODG00000007438	TSEN54	95	45.287	Monodelphis_domestica
ENSLACG00000009497	TSEN54	99	42.226	ENSMALG00000020573	tsen54	97	42.337	Monopterus_albus
ENSLACG00000009497	TSEN54	100	46.198	MGP_CAROLIEiJ_G0017417	Tsen54	97	46.198	Mus_caroli
ENSLACG00000009497	TSEN54	100	46.958	ENSMUSG00000020781	Tsen54	97	46.958	Mus_musculus
ENSLACG00000009497	TSEN54	100	46.198	MGP_PahariEiJ_G0018547	Tsen54	97	46.198	Mus_pahari
ENSLACG00000009497	TSEN54	100	47.338	MGP_SPRETEiJ_G0018262	Tsen54	97	47.338	Mus_spretus
ENSLACG00000009497	TSEN54	99	47.036	ENSMPUG00000013870	TSEN54	96	47.036	Mustela_putorius_furo
ENSLACG00000009497	TSEN54	100	43.478	ENSMLUG00000015298	TSEN54	97	45.106	Myotis_lucifugus
ENSLACG00000009497	TSEN54	100	45.489	ENSNGAG00000015673	Tsen54	97	45.489	Nannospalax_galili
ENSLACG00000009497	TSEN54	92	42.974	ENSMEUG00000011908	TSEN54	100	42.974	Notamacropus_eugenii
ENSLACG00000009497	TSEN54	100	42.885	ENSOPRG00000012513	TSEN54	96	42.885	Ochotona_princeps
ENSLACG00000009497	TSEN54	99	43.762	ENSONIG00000009543	tsen54	96	43.762	Oreochromis_niloticus
ENSLACG00000009497	TSEN54	100	43.429	ENSOCUG00000009875	TSEN54	97	43.619	Oryctolagus_cuniculus
ENSLACG00000009497	TSEN54	99	40.426	ENSORLG00000000852	tsen54	97	40.426	Oryzias_latipes
ENSLACG00000009497	TSEN54	99	39.845	ENSORLG00020018221	tsen54	97	41.006	Oryzias_latipes_hni
ENSLACG00000009497	TSEN54	99	40.039	ENSORLG00015009413	tsen54	98	40.812	Oryzias_latipes_hsok
ENSLACG00000009497	TSEN54	99	40.426	ENSOMEG00000014402	tsen54	94	40.426	Oryzias_melastigma
ENSLACG00000009497	TSEN54	100	44.595	ENSOGAG00000001442	TSEN54	97	44.595	Otolemur_garnettii
ENSLACG00000009497	TSEN54	87	41.935	ENSOARG00000010361	TSEN54	98	43.162	Ovis_aries
ENSLACG00000009497	TSEN54	97	47.327	ENSPPAG00000043519	TSEN54	99	47.921	Pan_paniscus
ENSLACG00000009497	TSEN54	100	46.053	ENSPPRG00000009162	TSEN54	97	46.429	Panthera_pardus
ENSLACG00000009497	TSEN54	88	43.226	ENSPTIG00000019312	TSEN54	96	43.656	Panthera_tigris_altaica
ENSLACG00000009497	TSEN54	100	47.692	ENSPTRG00000009646	TSEN54	97	48.649	Pan_troglodytes
ENSLACG00000009497	TSEN54	100	47.115	ENSPANG00000020133	TSEN54	96	48.069	Papio_anubis
ENSLACG00000009497	TSEN54	100	39.421	ENSPKIG00000023018	tsen54	100	38.952	Paramormyrops_kingsleyae
ENSLACG00000009497	TSEN54	83	46.560	ENSPSIG00000012807	TSEN54	100	46.560	Pelodiscus_sinensis
ENSLACG00000009497	TSEN54	96	32.335	ENSPMGG00000019578	tsen54	99	32.335	Periophthalmus_magnuspinnatus
ENSLACG00000009497	TSEN54	100	46.503	ENSPEMG00000014857	Tsen54	97	46.503	Peromyscus_maniculatus_bairdii
ENSLACG00000009497	TSEN54	99	43.436	ENSPFOG00000022740	tsen54	96	43.436	Poecilia_formosa
ENSLACG00000009497	TSEN54	99	43.327	ENSPLAG00000014847	tsen54	96	43.327	Poecilia_latipinna
ENSLACG00000009497	TSEN54	99	43.217	ENSPMEG00000022876	tsen54	96	43.217	Poecilia_mexicana
ENSLACG00000009497	TSEN54	99	42.636	ENSPREG00000013090	tsen54	96	42.636	Poecilia_reticulata
ENSLACG00000009497	TSEN54	94	44.262	ENSPPYG00000008629	TSEN54	100	44.196	Pongo_abelii
ENSLACG00000009497	TSEN54	70	65.132	ENSPCAG00000002093	TSEN54	95	40.467	Procavia_capensis
ENSLACG00000009497	TSEN54	100	47.036	ENSPCOG00000027880	TSEN54	97	48.084	Propithecus_coquereli
ENSLACG00000009497	TSEN54	100	45.541	ENSPVAG00000008446	TSEN54	97	45.541	Pteropus_vampyrus
ENSLACG00000009497	TSEN54	96	41.535	ENSPNYG00000010217	tsen54	99	42.157	Pundamilia_nyererei
ENSLACG00000009497	TSEN54	99	41.917	ENSPNAG00000003770	tsen54	96	41.509	Pygocentrus_nattereri
ENSLACG00000009497	TSEN54	100	46.198	ENSRNOG00000004598	Tsen54	97	46.198	Rattus_norvegicus
ENSLACG00000009497	TSEN54	100	48.456	ENSRBIG00000043040	TSEN54	97	48.456	Rhinopithecus_bieti
ENSLACG00000009497	TSEN54	100	48.456	ENSRROG00000030797	TSEN54	97	48.456	Rhinopithecus_roxellana
ENSLACG00000009497	TSEN54	100	44.615	ENSSBOG00000013543	TSEN54	96	45.367	Saimiri_boliviensis_boliviensis
ENSLACG00000009497	TSEN54	100	45.057	ENSSHAG00000018127	TSEN54	96	45.057	Sarcophilus_harrisii
ENSLACG00000009497	TSEN54	84	42.202	ENSSFOG00015004093	tsen54	100	42.202	Scleropages_formosus
ENSLACG00000009497	TSEN54	99	41.731	ENSSMAG00000012449	tsen54	98	42.337	Scophthalmus_maximus
ENSLACG00000009497	TSEN54	99	43.511	ENSSDUG00000021506	tsen54	97	43.511	Seriola_dumerili
ENSLACG00000009497	TSEN54	99	43.511	ENSSLDG00000016303	tsen54	97	43.511	Seriola_lalandi_dorsalis
ENSLACG00000009497	TSEN54	82	44.573	ENSSPUG00000008988	TSEN54	96	44.573	Sphenodon_punctatus
ENSLACG00000009497	TSEN54	83	38.799	ENSSPAG00000008047	tsen54	99	38.799	Stegastes_partitus
ENSLACG00000009497	TSEN54	96	41.650	ENSSPAG00000008098	-	99	41.650	Stegastes_partitus
ENSLACG00000009497	TSEN54	100	46.958	ENSSSCG00000036852	TSEN54	97	47.180	Sus_scrofa
ENSLACG00000009497	TSEN54	88	44.658	ENSTGUG00000008548	TSEN54	99	44.658	Taeniopygia_guttata
ENSLACG00000009497	TSEN54	99	40.426	ENSTRUG00000004230	tsen54	96	40.426	Takifugu_rubripes
ENSLACG00000009497	TSEN54	81	59.172	ENSTNIG00000011281	tsen54	97	38.931	Tetraodon_nigroviridis
ENSLACG00000009497	TSEN54	85	43.833	ENSTTRG00000015828	TSEN54	96	44.009	Tursiops_truncatus
ENSLACG00000009497	TSEN54	84	42.342	ENSUAMG00000010045	TSEN54	100	42.342	Ursus_americanus
ENSLACG00000009497	TSEN54	86	42.670	ENSUMAG00000008979	TSEN54	100	42.342	Ursus_maritimus
ENSLACG00000009497	TSEN54	99	46.845	ENSVVUG00000011411	TSEN54	97	47.419	Vulpes_vulpes
ENSLACG00000009497	TSEN54	99	45.333	ENSXETG00000012532	tsen54	99	54.730	Xenopus_tropicalis
ENSLACG00000009497	TSEN54	76	56.173	ENSXCOG00000018245	tsen54	86	56.173	Xiphophorus_couchianus
ENSLACG00000009497	TSEN54	99	42.166	ENSXMAG00000018818	tsen54	96	42.166	Xiphophorus_maculatus