EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000009507 (Gene tree)
Gene ID: 102354451
Gene Symbol: GRSF1
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 25154 bases
Position: chrJH127526.1:426816-451969
Accession: 102354451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000010798	RRM_1	PF00076.22	2.4e-19	1	2
ENSLACP00000010798	RRM_1	PF00076.22	2.4e-19	2	2
ENSLACP00000010797	RRM_1	PF00076.22	7.5e-16	1	2
ENSLACP00000010797	RRM_1	PF00076.22	7.5e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000010877	GRSF1-201	4490	XM_006003729	ENSLACP00000010797	420 (aa)	XP_006003791	H3AMC6
ENSLACT00000010878	GRSF1-202	1077	-	ENSLACP00000010798	358 (aa)	-	H3AMC7

Gene Model

Click here to download ENSLACG00000009507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000009507	GRSF1	91	44.152	ENSLACG00000013291	HNRNPH3	67	43.228
ENSLACG00000009507	GRSF1	80	38.158	ENSLACG00000007177	RBM12B	97	38.158
ENSLACG00000009507	GRSF1	90	43.902	ENSLACG00000004394	-	77	45.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009507	GRSF1	97	53.672	ENSG00000132463	GRSF1	99	54.114	Homo_sapiens
ENSLACG00000009507	GRSF1	97	53.824	ENSAMEG00000005896	GRSF1	98	53.824	Ailuropoda_melanoleuca
ENSLACG00000009507	GRSF1	100	52.486	ENSACAG00000012921	GRSF1	75	51.771	Anolis_carolinensis
ENSLACG00000009507	GRSF1	97	53.390	ENSANAG00000022114	GRSF1	97	52.443	Aotus_nancymaae
ENSLACG00000009507	GRSF1	94	53.846	ENSBTAG00000008577	GRSF1	98	53.955	Bos_taurus
ENSLACG00000009507	GRSF1	97	53.390	ENSCJAG00000014477	GRSF1	99	52.443	Callithrix_jacchus
ENSLACG00000009507	GRSF1	91	51.786	ENSCAFG00000002922	GRSF1	99	51.786	Canis_familiaris
ENSLACG00000009507	GRSF1	97	54.108	ENSCAFG00020027060	GRSF1	85	54.108	Canis_lupus_dingo
ENSLACG00000009507	GRSF1	94	53.254	ENSCHIG00000021580	GRSF1	87	47.887	Capra_hircus
ENSLACG00000009507	GRSF1	97	54.108	ENSTSYG00000008487	-	99	53.797	Carlito_syrichta
ENSLACG00000009507	GRSF1	97	47.293	ENSTSYG00000028860	-	97	47.293	Carlito_syrichta
ENSLACG00000009507	GRSF1	90	52.145	ENSCAPG00000000156	GRSF1	98	52.145	Cavia_aperea
ENSLACG00000009507	GRSF1	96	53.009	ENSCPOG00000011662	GRSF1	97	53.009	Cavia_porcellus
ENSLACG00000009507	GRSF1	97	53.541	ENSCCAG00000028735	-	80	49.610	Cebus_capucinus
ENSLACG00000009507	GRSF1	91	41.860	ENSCCAG00000024189	-	82	43.307	Cebus_capucinus
ENSLACG00000009507	GRSF1	97	53.390	ENSCATG00000035808	GRSF1	99	53.074	Cercocebus_atys
ENSLACG00000009507	GRSF1	97	51.977	ENSCLAG00000003057	GRSF1	98	51.977	Chinchilla_lanigera
ENSLACG00000009507	GRSF1	97	53.107	ENSCSAG00000004856	GRSF1	80	49.870	Chlorocebus_sabaeus
ENSLACG00000009507	GRSF1	99	50.272	ENSCPBG00000019502	GRSF1	68	50.272	Chrysemys_picta_bellii
ENSLACG00000009507	GRSF1	91	54.114	ENSCANG00000037992	GRSF1	99	54.114	Colobus_angolensis_palliatus
ENSLACG00000009507	GRSF1	97	53.824	ENSCGRG00001019953	Grsf1	98	53.824	Cricetulus_griseus_chok1gshd
ENSLACG00000009507	GRSF1	97	53.824	ENSCGRG00000005357	Grsf1	98	53.824	Cricetulus_griseus_crigri
ENSLACG00000009507	GRSF1	97	53.824	ENSDORG00000015145	Grsf1	95	60.000	Dipodomys_ordii
ENSLACG00000009507	GRSF1	94	54.412	ENSETEG00000013786	GRSF1	99	54.412	Echinops_telfairi
ENSLACG00000009507	GRSF1	97	53.107	ENSEASG00005016685	GRSF1	80	47.585	Equus_asinus_asinus
ENSLACG00000009507	GRSF1	97	52.825	ENSECAG00000024208	GRSF1	75	49.351	Equus_caballus
ENSLACG00000009507	GRSF1	98	41.127	ENSELUG00000011613	-	89	41.595	Esox_lucius
ENSLACG00000009507	GRSF1	97	53.824	ENSFCAG00000007270	GRSF1	85	48.184	Felis_catus
ENSLACG00000009507	GRSF1	93	47.701	ENSFALG00000008394	GRSF1	98	47.701	Ficedula_albicollis
ENSLACG00000009507	GRSF1	50	59.231	ENSFDAG00000008167	-	95	59.231	Fukomys_damarensis
ENSLACG00000009507	GRSF1	94	44.444	ENSGALG00000031160	GRSF1	70	44.152	Gallus_gallus
ENSLACG00000009507	GRSF1	99	53.406	ENSGAGG00000006013	GRSF1	78	53.406	Gopherus_agassizii
ENSLACG00000009507	GRSF1	91	54.430	ENSGGOG00000014852	-	99	54.430	Gorilla_gorilla
ENSLACG00000009507	GRSF1	97	51.130	ENSHGLG00000000661	GRSF1	98	51.130	Heterocephalus_glaber_female
ENSLACG00000009507	GRSF1	97	51.130	ENSHGLG00100005974	GRSF1	95	59.231	Heterocephalus_glaber_male
ENSLACG00000009507	GRSF1	97	53.824	ENSSTOG00000011569	GRSF1	98	53.824	Ictidomys_tridecemlineatus
ENSLACG00000009507	GRSF1	93	51.479	ENSJJAG00000005325	Grsf1	95	59.231	Jaculus_jaculus
ENSLACG00000009507	GRSF1	97	48.442	ENSLOCG00000011589	GRSF1	80	46.685	Lepisosteus_oculatus
ENSLACG00000009507	GRSF1	99	52.210	ENSLAFG00000017032	-	99	49.858	Loxodonta_africana
ENSLACG00000009507	GRSF1	97	53.390	ENSMFAG00000037346	GRSF1	99	53.074	Macaca_fascicularis
ENSLACG00000009507	GRSF1	97	53.390	ENSMMUG00000000380	GRSF1	98	53.094	Macaca_mulatta
ENSLACG00000009507	GRSF1	97	47.175	ENSMNEG00000023162	GRSF1	99	46.032	Macaca_nemestrina
ENSLACG00000009507	GRSF1	97	53.824	ENSMLEG00000007180	GRSF1	99	53.074	Mandrillus_leucophaeus
ENSLACG00000009507	GRSF1	93	45.401	ENSMGAG00000009940	GRSF1	99	45.401	Meleagris_gallopavo
ENSLACG00000009507	GRSF1	100	52.066	ENSMICG00000005385	GRSF1	96	52.809	Microcebus_murinus
ENSLACG00000009507	GRSF1	50	60.769	ENSMOCG00000012769	-	95	60.769	Microtus_ochrogaster
ENSLACG00000009507	GRSF1	97	50.975	ENSMODG00000019088	GRSF1	78	46.539	Monodelphis_domestica
ENSLACG00000009507	GRSF1	97	52.975	MGP_CAROLIEiJ_G0027377	Grsf1	95	59.231	Mus_caroli
ENSLACG00000009507	GRSF1	97	52.975	ENSMUSG00000044221	Grsf1	95	59.231	Mus_musculus
ENSLACG00000009507	GRSF1	97	51.841	MGP_PahariEiJ_G0017155	Grsf1	95	59.231	Mus_pahari
ENSLACG00000009507	GRSF1	97	52.825	MGP_SPRETEiJ_G0028374	Grsf1	98	52.825	Mus_spretus
ENSLACG00000009507	GRSF1	97	53.541	ENSMPUG00000009499	GRSF1	94	53.541	Mustela_putorius_furo
ENSLACG00000009507	GRSF1	93	54.438	ENSMLUG00000028158	GRSF1	98	53.652	Myotis_lucifugus
ENSLACG00000009507	GRSF1	50	59.231	ENSNGAG00000022132	-	95	59.231	Nannospalax_galili
ENSLACG00000009507	GRSF1	91	52.427	ENSNLEG00000007721	-	99	52.427	Nomascus_leucogenys
ENSLACG00000009507	GRSF1	97	41.311	ENSMEUG00000015942	GRSF1	98	41.408	Notamacropus_eugenii
ENSLACG00000009507	GRSF1	80	50.172	ENSOPRG00000010148	-	75	50.172	Ochotona_princeps
ENSLACG00000009507	GRSF1	92	45.646	ENSODEG00000010775	-	97	45.646	Octodon_degus
ENSLACG00000009507	GRSF1	97	51.977	ENSODEG00000001826	-	85	47.030	Octodon_degus
ENSLACG00000009507	GRSF1	97	44.633	ENSODEG00000004897	-	98	44.633	Octodon_degus
ENSLACG00000009507	GRSF1	88	41.057	ENSOANG00000013696	-	100	41.057	Ornithorhynchus_anatinus
ENSLACG00000009507	GRSF1	97	54.237	ENSOCUG00000010029	GRSF1	75	54.237	Oryctolagus_cuniculus
ENSLACG00000009507	GRSF1	97	47.009	ENSOGAG00000026370	-	89	42.998	Otolemur_garnettii
ENSLACG00000009507	GRSF1	97	51.404	ENSOGAG00000000141	-	98	51.404	Otolemur_garnettii
ENSLACG00000009507	GRSF1	93	53.235	ENSOARG00000011898	GRSF1	98	53.221	Ovis_aries
ENSLACG00000009507	GRSF1	91	54.114	ENSPPAG00000042456	-	99	54.114	Pan_paniscus
ENSLACG00000009507	GRSF1	97	53.824	ENSPPRG00000022913	GRSF1	85	48.184	Panthera_pardus
ENSLACG00000009507	GRSF1	97	53.824	ENSPTIG00000008060	GRSF1	98	53.824	Panthera_tigris_altaica
ENSLACG00000009507	GRSF1	97	53.107	ENSPTRG00000016136	GRSF1	99	52.751	Pan_troglodytes
ENSLACG00000009507	GRSF1	97	52.825	ENSPANG00000018597	GRSF1	99	52.427	Papio_anubis
ENSLACG00000009507	GRSF1	56	58.128	ENSPSIG00000014267	-	96	58.128	Pelodiscus_sinensis
ENSLACG00000009507	GRSF1	97	53.824	ENSPEMG00000012814	Grsf1	98	53.824	Peromyscus_maniculatus_bairdii
ENSLACG00000009507	GRSF1	97	51.389	ENSPCIG00000000627	GRSF1	84	47.113	Phascolarctos_cinereus
ENSLACG00000009507	GRSF1	97	46.023	ENSPPYG00000014812	GRSF1	78	43.350	Pongo_abelii
ENSLACG00000009507	GRSF1	97	52.825	ENSPCAG00000013949	GRSF1	87	47.942	Procavia_capensis
ENSLACG00000009507	GRSF1	97	55.367	ENSPVAG00000004338	GRSF1	88	50.882	Pteropus_vampyrus
ENSLACG00000009507	GRSF1	97	52.825	ENSRNOG00000003392	Grsf1	93	52.825	Rattus_norvegicus
ENSLACG00000009507	GRSF1	97	53.390	ENSRBIG00000036494	GRSF1	99	53.074	Rhinopithecus_bieti
ENSLACG00000009507	GRSF1	97	53.390	ENSRROG00000035735	GRSF1	99	53.074	Rhinopithecus_roxellana
ENSLACG00000009507	GRSF1	91	60.784	ENSSBOG00000032141	GRSF1	99	60.784	Saimiri_boliviensis_boliviensis
ENSLACG00000009507	GRSF1	97	51.420	ENSSHAG00000018365	GRSF1	92	51.420	Sarcophilus_harrisii
ENSLACG00000009507	GRSF1	91	50.489	ENSSARG00000011681	GRSF1	99	50.489	Sorex_araneus
ENSLACG00000009507	GRSF1	96	49.138	ENSSPUG00000007576	GRSF1	99	42.438	Sphenodon_punctatus
ENSLACG00000009507	GRSF1	94	53.846	ENSSSCG00000008940	GRSF1	85	48.668	Sus_scrofa
ENSLACG00000009507	GRSF1	93	47.384	ENSTGUG00000001644	GRSF1	98	47.384	Taeniopygia_guttata
ENSLACG00000009507	GRSF1	91	52.769	ENSTBEG00000010173	GRSF1	99	52.769	Tupaia_belangeri
ENSLACG00000009507	GRSF1	94	51.327	ENSTTRG00000008405	GRSF1	98	46.988	Tursiops_truncatus
ENSLACG00000009507	GRSF1	62	58.036	ENSUAMG00000008901	GRSF1	80	58.036	Ursus_americanus
ENSLACG00000009507	GRSF1	97	54.108	ENSUMAG00000003757	GRSF1	91	50.394	Ursus_maritimus
ENSLACG00000009507	GRSF1	93	45.401	ENSVPAG00000011889	GRSF1	98	45.892	Vicugna_pacos
ENSLACG00000009507	GRSF1	93	54.006	ENSVVUG00000004150	GRSF1	98	54.006	Vulpes_vulpes
ENSLACG00000009507	GRSF1	96	49.858	ENSXETG00000013850	grsf1	99	49.128	Xenopus_tropicalis