EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009700 (Gene tree)
Gene ID: 102355319
Gene Symbol: GPATCH4
Alias: DKFZP434F1735|FLJ20249|GPATC4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 18386 bases
Position: chrJH127154.1:442382-460767
Accession: 102355319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011023	G-patch	PF01585.23	7.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011106	GPATCH4-201	1163	XM_006000269	ENSLACP00000011023	344 (aa)	XP_006000331	H3AN02

Gene Model

Click here to download ENSLACG00000009700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009700	GPATCH4	54	52.660	ENSG00000160818	GPATCH4	92	48.276	Homo_sapiens
ENSLACG00000009700	GPATCH4	95	48.657	ENSAPOG00000008436	gpatch4	53	63.033	Acanthochromis_polyacanthus
ENSLACG00000009700	GPATCH4	74	76.812	ENSAOCG00000015494	gpatch4	86	44.638	Amphiprion_ocellaris
ENSLACG00000009700	GPATCH4	96	47.126	ENSAPEG00000022243	gpatch4	54	63.084	Amphiprion_percula
ENSLACG00000009700	GPATCH4	69	58.607	ENSACLG00000010456	gpatch4	51	70.238	Astatotilapia_calliptera
ENSLACG00000009700	GPATCH4	54	51.075	ENSCJAG00000006048	GPATCH4	86	48.649	Callithrix_jacchus
ENSLACG00000009700	GPATCH4	54	51.872	ENSCCAG00000036114	GPATCH4	86	48.649	Cebus_capucinus
ENSLACG00000009700	GPATCH4	54	50.802	ENSCATG00000042152	GPATCH4	73	49.091	Cercocebus_atys
ENSLACG00000009700	GPATCH4	57	67.172	ENSCPBG00000025803	GPATCH4	68	65.217	Chrysemys_picta_bellii
ENSLACG00000009700	GPATCH4	52	49.721	ENSCING00000004717	-	70	48.603	Ciona_intestinalis
ENSLACG00000009700	GPATCH4	54	51.337	ENSCANG00000030031	GPATCH4	73	49.091	Colobus_angolensis_palliatus
ENSLACG00000009700	GPATCH4	68	46.964	ENSCSEG00000012030	gpatch4	62	52.093	Cynoglossus_semilaevis
ENSLACG00000009700	GPATCH4	57	62.562	ENSDARG00000091931	gpatch4	82	57.595	Danio_rerio
ENSLACG00000009700	GPATCH4	53	41.414	FBgn0039829	CG15561	69	34.783	Drosophila_melanogaster
ENSLACG00000009700	GPATCH4	57	39.151	ENSEBUG00000006498	-	69	38.389	Eptatretus_burgeri
ENSLACG00000009700	GPATCH4	56	51.020	ENSECAG00000011135	GPATCH4	54	51.020	Equus_caballus
ENSLACG00000009700	GPATCH4	57	50.000	ENSFCAG00000006554	GPATCH4	52	50.000	Felis_catus
ENSLACG00000009700	GPATCH4	57	62.255	ENSFHEG00000003097	gpatch4	53	62.562	Fundulus_heteroclitus
ENSLACG00000009700	GPATCH4	53	58.378	ENSGALG00000048365	GPATCH4	51	60.541	Gallus_gallus
ENSLACG00000009700	GPATCH4	59	59.135	ENSGAFG00000021732	gpatch4	67	59.135	Gambusia_affinis
ENSLACG00000009700	GPATCH4	57	61.275	ENSGACG00000013318	gpatch4	63	59.524	Gasterosteus_aculeatus
ENSLACG00000009700	GPATCH4	60	65.700	ENSGAGG00000020710	GPATCH4	68	66.184	Gopherus_agassizii
ENSLACG00000009700	GPATCH4	57	49.744	ENSGGOG00000000753	GPATCH4	73	49.091	Gorilla_gorilla
ENSLACG00000009700	GPATCH4	69	59.426	ENSHBUG00000009675	gpatch4	50	70.238	Haplochromis_burtoni
ENSLACG00000009700	GPATCH4	56	62.312	ENSHCOG00000007016	gpatch4	56	62.312	Hippocampus_comes
ENSLACG00000009700	GPATCH4	58	64.039	ENSIPUG00000006348	gpatch4	66	57.426	Ictalurus_punctatus
ENSLACG00000009700	GPATCH4	56	51.020	ENSSTOG00000020510	GPATCH4	89	48.780	Ictidomys_tridecemlineatus
ENSLACG00000009700	GPATCH4	62	59.375	ENSKMAG00000015765	gpatch4	59	60.268	Kryptolebias_marmoratus
ENSLACG00000009700	GPATCH4	59	59.070	ENSLBEG00000009364	-	53	60.930	Labrus_bergylta
ENSLACG00000009700	GPATCH4	66	55.230	ENSLBEG00000016296	gpatch4	51	57.627	Labrus_bergylta
ENSLACG00000009700	GPATCH4	59	52.582	ENSLOCG00000008820	gpatch4	61	52.582	Lepisosteus_oculatus
ENSLACG00000009700	GPATCH4	54	50.802	ENSMFAG00000030965	GPATCH4	73	49.091	Macaca_fascicularis
ENSLACG00000009700	GPATCH4	56	49.485	ENSMMUG00000002624	GPATCH4	73	49.091	Macaca_mulatta
ENSLACG00000009700	GPATCH4	54	50.802	ENSMNEG00000028844	GPATCH4	73	49.091	Macaca_nemestrina
ENSLACG00000009700	GPATCH4	54	50.267	ENSMLEG00000037909	GPATCH4	73	48.182	Mandrillus_leucophaeus
ENSLACG00000009700	GPATCH4	58	48.744	ENSMICG00000013624	GPATCH4	51	49.500	Microcebus_murinus
ENSLACG00000009700	GPATCH4	60	61.033	ENSMMOG00000017095	gpatch4	68	78.082	Mola_mola
ENSLACG00000009700	GPATCH4	62	53.521	ENSMODG00000016818	-	72	53.521	Monodelphis_domestica
ENSLACG00000009700	GPATCH4	62	53.052	ENSMODG00000014154	-	100	53.052	Monodelphis_domestica
ENSLACG00000009700	GPATCH4	69	58.025	ENSMALG00000003793	gpatch4	50	63.981	Monopterus_albus
ENSLACG00000009700	GPATCH4	60	49.268	MGP_CAROLIEiJ_G0025152	Gpatch4	82	49.268	Mus_caroli
ENSLACG00000009700	GPATCH4	60	48.792	ENSMUSG00000028069	Gpatch4	82	48.792	Mus_musculus
ENSLACG00000009700	GPATCH4	60	48.792	MGP_PahariEiJ_G0026595	-	82	48.792	Mus_pahari
ENSLACG00000009700	GPATCH4	60	48.792	MGP_SPRETEiJ_G0026093	Gpatch4	82	48.792	Mus_spretus
ENSLACG00000009700	GPATCH4	62	48.357	ENSMEUG00000006861	-	75	48.357	Notamacropus_eugenii
ENSLACG00000009700	GPATCH4	69	56.557	ENSONIG00000002261	gpatch4	83	47.289	Oreochromis_niloticus
ENSLACG00000009700	GPATCH4	58	60.870	ENSORLG00020013892	gpatch4	58	61.353	Oryzias_latipes_hni
ENSLACG00000009700	GPATCH4	78	51.625	ENSORLG00015019725	gpatch4	63	58.482	Oryzias_latipes_hsok
ENSLACG00000009700	GPATCH4	58	47.980	ENSOMEG00000000529	gpatch4	53	47.317	Oryzias_melastigma
ENSLACG00000009700	GPATCH4	54	51.337	ENSPPAG00000028364	-	73	49.091	Pan_paniscus
ENSLACG00000009700	GPATCH4	57	50.000	ENSPPRG00000002106	GPATCH4	52	50.000	Panthera_pardus
ENSLACG00000009700	GPATCH4	59	49.261	ENSPTIG00000006717	GPATCH4	79	46.154	Panthera_tigris_altaica
ENSLACG00000009700	GPATCH4	54	51.337	ENSPTRG00000001464	GPATCH4	73	49.091	Pan_troglodytes
ENSLACG00000009700	GPATCH4	54	50.802	ENSPANG00000018543	GPATCH4	73	49.091	Papio_anubis
ENSLACG00000009700	GPATCH4	59	66.341	ENSPSIG00000011317	GPATCH4	72	66.829	Pelodiscus_sinensis
ENSLACG00000009700	GPATCH4	56	55.172	ENSPMAG00000009175	gpatch4	67	58.974	Petromyzon_marinus
ENSLACG00000009700	GPATCH4	59	60.377	ENSPFOG00000011835	gpatch4	54	60.849	Poecilia_formosa
ENSLACG00000009700	GPATCH4	59	60.377	ENSPLAG00000019504	gpatch4	55	60.849	Poecilia_latipinna
ENSLACG00000009700	GPATCH4	59	60.377	ENSPMEG00000001375	gpatch4	55	60.849	Poecilia_mexicana
ENSLACG00000009700	GPATCH4	60	58.986	ENSPREG00000017029	gpatch4	58	59.447	Poecilia_reticulata
ENSLACG00000009700	GPATCH4	69	59.016	ENSPNYG00000018461	gpatch4	55	63.426	Pundamilia_nyererei
ENSLACG00000009700	GPATCH4	54	50.802	ENSRBIG00000005742	GPATCH4	73	49.091	Rhinopithecus_bieti
ENSLACG00000009700	GPATCH4	54	50.802	ENSRROG00000044157	GPATCH4	73	49.091	Rhinopithecus_roxellana
ENSLACG00000009700	GPATCH4	62	50.704	ENSSHAG00000015436	-	73	52.093	Sarcophilus_harrisii
ENSLACG00000009700	GPATCH4	75	52.941	ENSSMAG00000016329	gpatch4	52	58.952	Scophthalmus_maximus
ENSLACG00000009700	GPATCH4	57	62.621	ENSSDUG00000006583	gpatch4	53	63.380	Seriola_dumerili
ENSLACG00000009700	GPATCH4	57	62.621	ENSSLDG00000012365	gpatch4	53	63.380	Seriola_lalandi_dorsalis
ENSLACG00000009700	GPATCH4	56	67.857	ENSSPUG00000002674	GPATCH4	66	67.857	Sphenodon_punctatus
ENSLACG00000009700	GPATCH4	57	59.709	ENSTNIG00000005156	gpatch4	71	62.136	Tetraodon_nigroviridis
ENSLACG00000009700	GPATCH4	56	43.498	ENSVVUG00000006004	-	82	47.863	Vulpes_vulpes
ENSLACG00000009700	GPATCH4	90	51.104	ENSXETG00000020397	gpatch4	68	66.176	Xenopus_tropicalis
ENSLACG00000009700	GPATCH4	71	54.400	ENSXCOG00000003911	gpatch4	55	60.096	Xiphophorus_couchianus
ENSLACG00000009700	GPATCH4	71	54.902	ENSXMAG00000024520	gpatch4	55	60.377	Xiphophorus_maculatus