EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000009790 (Gene tree)
Gene ID: 102364890
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 158442 bases
Position: chrJH127038.1:449415-607856
Accession: 102364890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011127	S1	PF00575.23	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011210	SRBD1-201	3819	XM_005998780	ENSLACP00000011127	845 (aa)	XP_005998842	H3ANA6

Gene Model

Click here to download ENSLACG00000009790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000009790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000009790	SRBD1	100	70.449	ENSG00000068784	SRBD1	85	70.449	Homo_sapiens
ENSLACG00000009790	SRBD1	99	57.427	ENSAPOG00000005103	si:ch211-117n7.8	84	57.661	Acanthochromis_polyacanthus
ENSLACG00000009790	SRBD1	100	71.124	ENSAMEG00000005993	SRBD1	85	71.124	Ailuropoda_melanoleuca
ENSLACG00000009790	SRBD1	97	58.095	ENSACIG00000009875	si:ch211-117n7.8	85	58.061	Amphilophus_citrinellus
ENSLACG00000009790	SRBD1	98	57.783	ENSAOCG00000024718	si:ch211-117n7.8	84	58.019	Amphiprion_ocellaris
ENSLACG00000009790	SRBD1	98	58.137	ENSAPEG00000002645	si:ch211-117n7.8	87	58.137	Amphiprion_percula
ENSLACG00000009790	SRBD1	99	58.235	ENSATEG00000010844	si:ch211-117n7.8	84	58.235	Anabas_testudineus
ENSLACG00000009790	SRBD1	99	73.200	ENSAPLG00000006313	SRBD1	85	73.200	Anas_platyrhynchos
ENSLACG00000009790	SRBD1	100	70.331	ENSANAG00000025573	SRBD1	85	70.331	Aotus_nancymaae
ENSLACG00000009790	SRBD1	99	58.159	ENSACLG00000024219	si:ch211-117n7.8	83	58.275	Astatotilapia_calliptera
ENSLACG00000009790	SRBD1	100	60.727	ENSAMXG00000004294	SRBD1	84	61.196	Astyanax_mexicanus
ENSLACG00000009790	SRBD1	99	70.922	ENSBTAG00000007508	SRBD1	83	71.949	Bos_taurus
ENSLACG00000009790	SRBD1	100	70.095	ENSCJAG00000000727	SRBD1	85	70.095	Callithrix_jacchus
ENSLACG00000009790	SRBD1	100	71.226	ENSCAFG00000002554	SRBD1	85	71.226	Canis_familiaris
ENSLACG00000009790	SRBD1	100	70.296	ENSCAFG00020026284	SRBD1	98	70.296	Canis_lupus_dingo
ENSLACG00000009790	SRBD1	99	71.040	ENSCHIG00000016535	SRBD1	84	71.040	Capra_hircus
ENSLACG00000009790	SRBD1	99	71.226	ENSTSYG00000012797	SRBD1	85	71.226	Carlito_syrichta
ENSLACG00000009790	SRBD1	100	70.602	ENSCPOG00000004773	SRBD1	86	70.602	Cavia_porcellus
ENSLACG00000009790	SRBD1	100	70.567	ENSCCAG00000025589	SRBD1	85	70.567	Cebus_capucinus
ENSLACG00000009790	SRBD1	100	70.686	ENSCATG00000039530	SRBD1	85	70.686	Cercocebus_atys
ENSLACG00000009790	SRBD1	99	70.888	ENSCLAG00000008623	SRBD1	85	70.888	Chinchilla_lanigera
ENSLACG00000009790	SRBD1	100	70.922	ENSCSAG00000013350	SRBD1	85	70.922	Chlorocebus_sabaeus
ENSLACG00000009790	SRBD1	92	56.506	ENSCHOG00000003805	SRBD1	78	56.506	Choloepus_hoffmanni
ENSLACG00000009790	SRBD1	99	74.763	ENSCPBG00000005677	SRBD1	86	74.763	Chrysemys_picta_bellii
ENSLACG00000009790	SRBD1	93	43.219	ENSCING00000005950	-	99	43.219	Ciona_intestinalis
ENSLACG00000009790	SRBD1	93	43.090	ENSCSAVG00000000861	-	99	43.090	Ciona_savignyi
ENSLACG00000009790	SRBD1	100	70.804	ENSCANG00000016307	SRBD1	85	70.804	Colobus_angolensis_palliatus
ENSLACG00000009790	SRBD1	99	70.178	ENSCGRG00001000513	Srbd1	85	70.178	Cricetulus_griseus_chok1gshd
ENSLACG00000009790	SRBD1	99	70.178	ENSCGRG00000002283	Srbd1	85	70.178	Cricetulus_griseus_crigri
ENSLACG00000009790	SRBD1	99	56.842	ENSCSEG00000000856	si:ch211-117n7.8	85	57.544	Cynoglossus_semilaevis
ENSLACG00000009790	SRBD1	99	57.728	ENSCVAG00000020212	si:ch211-117n7.8	90	57.728	Cyprinodon_variegatus
ENSLACG00000009790	SRBD1	100	70.235	ENSDNOG00000018686	SRBD1	85	70.235	Dasypus_novemcinctus
ENSLACG00000009790	SRBD1	99	69.668	ENSDORG00000010468	Srbd1	85	69.668	Dipodomys_ordii
ENSLACG00000009790	SRBD1	93	34.739	FBgn0051156	CG31156	79	34.988	Drosophila_melanogaster
ENSLACG00000009790	SRBD1	91	69.946	ENSETEG00000000739	SRBD1	77	69.946	Echinops_telfairi
ENSLACG00000009790	SRBD1	85	49.113	ENSEBUG00000008902	si:ch211-117n7.8	96	49.113	Eptatretus_burgeri
ENSLACG00000009790	SRBD1	100	67.769	ENSEASG00005003132	SRBD1	94	72.460	Equus_asinus_asinus
ENSLACG00000009790	SRBD1	100	70.602	ENSECAG00000013865	SRBD1	83	70.602	Equus_caballus
ENSLACG00000009790	SRBD1	99	60.936	ENSELUG00000012592	si:ch211-117n7.8	82	60.936	Esox_lucius
ENSLACG00000009790	SRBD1	100	71.311	ENSFCAG00000005101	SRBD1	85	71.311	Felis_catus
ENSLACG00000009790	SRBD1	99	71.682	ENSFALG00000012966	SRBD1	86	71.682	Ficedula_albicollis
ENSLACG00000009790	SRBD1	99	70.024	ENSFDAG00000016670	SRBD1	86	70.024	Fukomys_damarensis
ENSLACG00000009790	SRBD1	98	58.775	ENSFHEG00000019480	si:ch211-117n7.8	82	58.775	Fundulus_heteroclitus
ENSLACG00000009790	SRBD1	59	54.566	ENSGMOG00000018010	-	100	54.566	Gadus_morhua
ENSLACG00000009790	SRBD1	99	72.393	ENSGALG00000009990	SRBD1	86	72.393	Gallus_gallus
ENSLACG00000009790	SRBD1	99	57.963	ENSGAFG00000019664	si:ch211-117n7.8	84	57.963	Gambusia_affinis
ENSLACG00000009790	SRBD1	73	61.182	ENSGACG00000010794	si:ch211-117n7.8	100	61.182	Gasterosteus_aculeatus
ENSLACG00000009790	SRBD1	98	74.970	ENSGAGG00000006166	SRBD1	99	74.970	Gopherus_agassizii
ENSLACG00000009790	SRBD1	100	70.922	ENSGGOG00000005910	SRBD1	87	70.922	Gorilla_gorilla
ENSLACG00000009790	SRBD1	99	51.781	ENSHBUG00000013207	si:ch211-117n7.8	86	51.900	Haplochromis_burtoni
ENSLACG00000009790	SRBD1	100	70.533	ENSHGLG00000018153	-	85	70.533	Heterocephalus_glaber_female
ENSLACG00000009790	SRBD1	99	70.498	ENSHGLG00100015183	-	85	70.498	Heterocephalus_glaber_male
ENSLACG00000009790	SRBD1	99	61.294	ENSIPUG00000009661	srbd1	85	61.294	Ictalurus_punctatus
ENSLACG00000009790	SRBD1	100	71.124	ENSSTOG00000005898	SRBD1	85	71.479	Ictidomys_tridecemlineatus
ENSLACG00000009790	SRBD1	99	67.494	ENSJJAG00000022244	Srbd1	85	67.494	Jaculus_jaculus
ENSLACG00000009790	SRBD1	99	58.528	ENSKMAG00000003473	si:ch211-117n7.8	84	58.528	Kryptolebias_marmoratus
ENSLACG00000009790	SRBD1	99	56.706	ENSLBEG00000027518	si:ch211-117n7.8	83	56.706	Labrus_bergylta
ENSLACG00000009790	SRBD1	100	63.615	ENSLOCG00000016360	si:ch211-117n7.8	85	63.615	Lepisosteus_oculatus
ENSLACG00000009790	SRBD1	100	70.922	ENSMFAG00000042026	SRBD1	85	70.922	Macaca_fascicularis
ENSLACG00000009790	SRBD1	100	70.922	ENSMMUG00000003490	SRBD1	85	70.922	Macaca_mulatta
ENSLACG00000009790	SRBD1	100	68.558	ENSMNEG00000034701	SRBD1	85	68.558	Macaca_nemestrina
ENSLACG00000009790	SRBD1	100	70.922	ENSMLEG00000000745	SRBD1	85	70.922	Mandrillus_leucophaeus
ENSLACG00000009790	SRBD1	97	57.983	ENSMAMG00000021921	si:ch211-117n7.8	84	57.529	Mastacembelus_armatus
ENSLACG00000009790	SRBD1	99	58.159	ENSMZEG00005027369	si:ch211-117n7.8	83	58.275	Maylandia_zebra
ENSLACG00000009790	SRBD1	94	69.434	ENSMGAG00000010273	SRBD1	99	69.434	Meleagris_gallopavo
ENSLACG00000009790	SRBD1	93	69.165	ENSMAUG00000013916	Srbd1	95	69.165	Mesocricetus_auratus
ENSLACG00000009790	SRBD1	100	70.922	ENSMICG00000007835	SRBD1	85	70.922	Microcebus_murinus
ENSLACG00000009790	SRBD1	98	70.072	ENSMOCG00000018716	Srbd1	84	70.072	Microtus_ochrogaster
ENSLACG00000009790	SRBD1	98	57.615	ENSMMOG00000007507	si:ch211-117n7.8	87	57.615	Mola_mola
ENSLACG00000009790	SRBD1	99	57.932	ENSMALG00000001562	si:ch211-117n7.8	83	58.167	Monopterus_albus
ENSLACG00000009790	SRBD1	99	69.905	MGP_CAROLIEiJ_G0021934	Srbd1	99	72.669	Mus_caroli
ENSLACG00000009790	SRBD1	99	69.787	ENSMUSG00000024135	Srbd1	99	70.408	Mus_musculus
ENSLACG00000009790	SRBD1	99	69.076	MGP_PahariEiJ_G0020924	Srbd1	85	69.076	Mus_pahari
ENSLACG00000009790	SRBD1	99	69.787	MGP_SPRETEiJ_G0022850	Srbd1	85	69.787	Mus_spretus
ENSLACG00000009790	SRBD1	100	71.192	ENSMLUG00000007039	SRBD1	85	71.192	Myotis_lucifugus
ENSLACG00000009790	SRBD1	100	68.119	ENSNGAG00000011893	Srbd1	86	68.119	Nannospalax_galili
ENSLACG00000009790	SRBD1	99	57.008	ENSNBRG00000012873	si:ch211-117n7.8	86	57.126	Neolamprologus_brichardi
ENSLACG00000009790	SRBD1	100	70.922	ENSNLEG00000016877	SRBD1	85	70.922	Nomascus_leucogenys
ENSLACG00000009790	SRBD1	99	69.668	ENSODEG00000012095	SRBD1	86	69.668	Octodon_degus
ENSLACG00000009790	SRBD1	98	59.544	ENSONIG00000000945	si:ch211-117n7.8	99	59.664	Oreochromis_niloticus
ENSLACG00000009790	SRBD1	100	70.602	ENSOCUG00000015385	SRBD1	85	70.838	Oryctolagus_cuniculus
ENSLACG00000009790	SRBD1	98	56.287	ENSORLG00000004427	si:ch211-117n7.8	82	56.287	Oryzias_latipes
ENSLACG00000009790	SRBD1	98	59.155	ENSORLG00020012792	si:ch211-117n7.8	82	59.155	Oryzias_latipes_hni
ENSLACG00000009790	SRBD1	98	58.872	ENSORLG00015018598	si:ch211-117n7.8	82	58.872	Oryzias_latipes_hsok
ENSLACG00000009790	SRBD1	98	57.278	ENSOMEG00000012229	si:ch211-117n7.8	82	57.278	Oryzias_melastigma
ENSLACG00000009790	SRBD1	99	67.665	ENSOGAG00000001076	SRBD1	85	67.178	Otolemur_garnettii
ENSLACG00000009790	SRBD1	99	66.515	ENSOARG00000005958	SRBD1	85	66.515	Ovis_aries
ENSLACG00000009790	SRBD1	99	71.257	ENSPPAG00000038442	SRBD1	85	70.804	Pan_paniscus
ENSLACG00000009790	SRBD1	100	71.277	ENSPPRG00000003449	SRBD1	85	71.277	Panthera_pardus
ENSLACG00000009790	SRBD1	100	71.395	ENSPTIG00000012495	SRBD1	85	71.395	Panthera_tigris_altaica
ENSLACG00000009790	SRBD1	99	71.018	ENSPTRG00000011889	SRBD1	85	70.567	Pan_troglodytes
ENSLACG00000009790	SRBD1	100	70.922	ENSPANG00000008063	SRBD1	85	70.922	Papio_anubis
ENSLACG00000009790	SRBD1	99	62.648	ENSPKIG00000021973	si:ch211-117n7.8	86	62.648	Paramormyrops_kingsleyae
ENSLACG00000009790	SRBD1	99	73.697	ENSPSIG00000008992	SRBD1	86	73.697	Pelodiscus_sinensis
ENSLACG00000009790	SRBD1	99	57.562	ENSPMGG00000013348	si:ch211-117n7.8	86	58.216	Periophthalmus_magnuspinnatus
ENSLACG00000009790	SRBD1	99	68.208	ENSPEMG00000020684	Srbd1	85	68.208	Peromyscus_maniculatus_bairdii
ENSLACG00000009790	SRBD1	98	58.422	ENSPFOG00000010650	si:ch211-117n7.8	83	58.422	Poecilia_formosa
ENSLACG00000009790	SRBD1	99	58.080	ENSPLAG00000002141	si:ch211-117n7.8	84	58.080	Poecilia_latipinna
ENSLACG00000009790	SRBD1	98	58.539	ENSPMEG00000018537	si:ch211-117n7.8	83	58.539	Poecilia_mexicana
ENSLACG00000009790	SRBD1	99	58.197	ENSPREG00000003258	si:ch211-117n7.8	86	58.197	Poecilia_reticulata
ENSLACG00000009790	SRBD1	100	61.080	ENSPPYG00000012444	SRBD1	85	61.080	Pongo_abelii
ENSLACG00000009790	SRBD1	89	65.517	ENSPCAG00000005629	SRBD1	80	65.517	Procavia_capensis
ENSLACG00000009790	SRBD1	100	58.920	ENSPCOG00000017669	SRBD1	84	58.920	Propithecus_coquereli
ENSLACG00000009790	SRBD1	99	62.678	ENSPVAG00000001782	SRBD1	85	62.678	Pteropus_vampyrus
ENSLACG00000009790	SRBD1	99	55.140	ENSPNYG00000000508	si:ch211-117n7.8	86	55.257	Pundamilia_nyererei
ENSLACG00000009790	SRBD1	100	62.207	ENSPNAG00000013492	SRBD1	86	62.324	Pygocentrus_nattereri
ENSLACG00000009790	SRBD1	99	69.431	ENSRNOG00000014720	Srbd1	85	69.787	Rattus_norvegicus
ENSLACG00000009790	SRBD1	100	70.804	ENSRBIG00000033486	SRBD1	85	70.804	Rhinopithecus_bieti
ENSLACG00000009790	SRBD1	100	70.804	ENSRROG00000041599	SRBD1	85	70.804	Rhinopithecus_roxellana
ENSLACG00000009790	SRBD1	100	70.567	ENSSBOG00000024982	SRBD1	85	70.567	Saimiri_boliviensis_boliviensis
ENSLACG00000009790	SRBD1	98	60.973	ENSSFOG00015001128	si:ch211-117n7.8	90	60.973	Scleropages_formosus
ENSLACG00000009790	SRBD1	98	57.783	ENSSMAG00000018256	si:ch211-117n7.8	82	58.137	Scophthalmus_maximus
ENSLACG00000009790	SRBD1	99	58.451	ENSSLDG00000023189	si:ch211-117n7.8	83	58.451	Seriola_lalandi_dorsalis
ENSLACG00000009790	SRBD1	99	65.957	ENSSARG00000009740	SRBD1	86	65.957	Sorex_araneus
ENSLACG00000009790	SRBD1	99	72.156	ENSSPUG00000010475	SRBD1	94	72.156	Sphenodon_punctatus
ENSLACG00000009790	SRBD1	99	56.118	ENSSPAG00000008092	-	84	56.588	Stegastes_partitus
ENSLACG00000009790	SRBD1	99	71.513	ENSSSCG00000008445	SRBD1	83	71.513	Sus_scrofa
ENSLACG00000009790	SRBD1	98	72.684	ENSTGUG00000003878	SRBD1	100	72.684	Taeniopygia_guttata
ENSLACG00000009790	SRBD1	99	56.813	ENSTRUG00000007080	si:ch211-117n7.8	94	57.159	Takifugu_rubripes
ENSLACG00000009790	SRBD1	99	56.709	ENSTNIG00000007464	si:ch211-117n7.8	83	56.709	Tetraodon_nigroviridis
ENSLACG00000009790	SRBD1	79	87.234	ENSTBEG00000004556	SRBD1	68	87.234	Tupaia_belangeri
ENSLACG00000009790	SRBD1	92	71.127	ENSTTRG00000011871	SRBD1	78	71.127	Tursiops_truncatus
ENSLACG00000009790	SRBD1	100	71.311	ENSUAMG00000008126	SRBD1	97	71.377	Ursus_americanus
ENSLACG00000009790	SRBD1	100	71.192	ENSUMAG00000012902	SRBD1	84	71.192	Ursus_maritimus
ENSLACG00000009790	SRBD1	99	70.888	ENSVPAG00000006825	SRBD1	93	70.888	Vicugna_pacos
ENSLACG00000009790	SRBD1	100	71.192	ENSVVUG00000005389	SRBD1	86	71.192	Vulpes_vulpes
ENSLACG00000009790	SRBD1	99	56.821	ENSXETG00000002760	srbd1	86	56.821	Xenopus_tropicalis
ENSLACG00000009790	SRBD1	99	58.665	ENSXMAG00000016861	si:ch211-117n7.8	84	58.665	Xiphophorus_maculatus