EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010203 (Gene tree)
Gene ID: 102361354
Gene Symbol: POP7
Alias: RPP2|RPP20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 426 bases
Position: chrJH127111.1:481345-481770
Accession: 102361354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011595	Alba	PF01918.21	3.1e-11	1	1
ENSLACP00000011595	Rpp20	PF12328.8	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011684	POP7-201	426	XM_005999776	ENSLACP00000011595	141 (aa)	XP_005999838	H3APM4

Gene Model

Click here to download ENSLACG00000010203's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010203	POP7	100	73.288	ENSG00000172336	POP7	100	73.288	Homo_sapiens
ENSLACG00000010203	POP7	89	77.165	ENSAPOG00000015722	pop7	99	73.529	Acanthochromis_polyacanthus
ENSLACG00000010203	POP7	89	76.562	ENSACIG00000022071	pop7	95	76.562	Amphilophus_citrinellus
ENSLACG00000010203	POP7	96	73.723	ENSAOCG00000021222	pop7	90	73.723	Amphiprion_ocellaris
ENSLACG00000010203	POP7	96	73.723	ENSAPEG00000018819	pop7	90	73.723	Amphiprion_percula
ENSLACG00000010203	POP7	87	77.600	ENSATEG00000017615	pop7	83	77.600	Anabas_testudineus
ENSLACG00000010203	POP7	100	73.288	ENSANAG00000019054	POP7	100	73.288	Aotus_nancymaae
ENSLACG00000010203	POP7	92	75.758	ENSACLG00000018898	pop7	87	75.758	Astatotilapia_calliptera
ENSLACG00000010203	POP7	82	84.874	ENSAMXG00000025789	pop7	84	84.874	Astyanax_mexicanus
ENSLACG00000010203	POP7	100	73.288	ENSCJAG00000015056	POP7	100	73.288	Callithrix_jacchus
ENSLACG00000010203	POP7	100	73.973	ENSCAFG00000014205	POP7	100	73.973	Canis_familiaris
ENSLACG00000010203	POP7	100	73.973	ENSCAFG00020013863	POP7	100	73.973	Canis_lupus_dingo
ENSLACG00000010203	POP7	100	72.603	ENSCHIG00000013484	POP7	100	72.603	Capra_hircus
ENSLACG00000010203	POP7	100	71.918	ENSTSYG00000035016	POP7	100	71.918	Carlito_syrichta
ENSLACG00000010203	POP7	100	73.288	ENSCPOG00000005767	POP7	100	73.288	Cavia_porcellus
ENSLACG00000010203	POP7	100	73.288	ENSCCAG00000008898	POP7	100	73.288	Cebus_capucinus
ENSLACG00000010203	POP7	100	72.603	ENSCATG00000010371	POP7	100	72.603	Cercocebus_atys
ENSLACG00000010203	POP7	100	73.288	ENSCLAG00000001541	POP7	100	73.288	Chinchilla_lanigera
ENSLACG00000010203	POP7	100	72.603	ENSCSAG00000017937	POP7	100	72.603	Chlorocebus_sabaeus
ENSLACG00000010203	POP7	100	73.288	ENSCANG00000000652	POP7	100	73.288	Colobus_angolensis_palliatus
ENSLACG00000010203	POP7	100	73.288	ENSCGRG00001010593	Pop7	100	73.288	Cricetulus_griseus_chok1gshd
ENSLACG00000010203	POP7	100	73.288	ENSCGRG00000019940	Pop7	100	73.288	Cricetulus_griseus_crigri
ENSLACG00000010203	POP7	87	76.800	ENSCSEG00000013197	pop7	97	76.800	Cynoglossus_semilaevis
ENSLACG00000010203	POP7	100	70.629	ENSCVAG00000016728	pop7	93	70.629	Cyprinodon_variegatus
ENSLACG00000010203	POP7	86	76.423	ENSDARG00000036394	pop7	82	76.423	Danio_rerio
ENSLACG00000010203	POP7	100	72.603	ENSDNOG00000031207	POP7	64	72.603	Dasypus_novemcinctus
ENSLACG00000010203	POP7	100	72.789	ENSDORG00000012512	Pop7	100	72.789	Dipodomys_ordii
ENSLACG00000010203	POP7	94	43.939	FBgn0066304	Rpp20	74	43.939	Drosophila_melanogaster
ENSLACG00000010203	POP7	100	71.918	ENSETEG00000007941	POP7	100	71.918	Echinops_telfairi
ENSLACG00000010203	POP7	100	73.288	ENSEASG00005016994	POP7	100	73.288	Equus_asinus_asinus
ENSLACG00000010203	POP7	100	73.288	ENSECAG00000010383	POP7	100	73.288	Equus_caballus
ENSLACG00000010203	POP7	79	76.991	ENSELUG00000023947	pop7	88	76.991	Esox_lucius
ENSLACG00000010203	POP7	100	73.973	ENSFCAG00000006849	POP7	100	73.973	Felis_catus
ENSLACG00000010203	POP7	100	72.603	ENSFDAG00000018839	POP7	100	72.603	Fukomys_damarensis
ENSLACG00000010203	POP7	87	77.419	ENSFHEG00000012595	pop7	82	77.419	Fundulus_heteroclitus
ENSLACG00000010203	POP7	96	71.533	ENSGAFG00000017633	pop7	91	71.533	Gambusia_affinis
ENSLACG00000010203	POP7	92	76.515	ENSGACG00000019931	pop7	87	76.515	Gasterosteus_aculeatus
ENSLACG00000010203	POP7	100	73.288	ENSGGOG00000016492	POP7	100	73.288	Gorilla_gorilla
ENSLACG00000010203	POP7	79	82.301	ENSHBUG00000011987	pop7	86	82.301	Haplochromis_burtoni
ENSLACG00000010203	POP7	100	71.918	ENSHGLG00000018118	POP7	100	71.918	Heterocephalus_glaber_female
ENSLACG00000010203	POP7	100	71.918	ENSHGLG00100007908	POP7	100	71.918	Heterocephalus_glaber_male
ENSLACG00000010203	POP7	94	77.206	ENSHCOG00000010137	pop7	90	77.206	Hippocampus_comes
ENSLACG00000010203	POP7	96	72.109	ENSIPUG00000000411	pop7	97	72.109	Ictalurus_punctatus
ENSLACG00000010203	POP7	100	73.288	ENSSTOG00000030883	POP7	100	73.288	Ictidomys_tridecemlineatus
ENSLACG00000010203	POP7	100	72.603	ENSJJAG00000003989	Pop7	100	72.603	Jaculus_jaculus
ENSLACG00000010203	POP7	94	74.627	ENSKMAG00000010696	pop7	89	74.627	Kryptolebias_marmoratus
ENSLACG00000010203	POP7	93	73.684	ENSLBEG00000003483	pop7	95	73.684	Labrus_bergylta
ENSLACG00000010203	POP7	91	71.756	ENSLBEG00000008621	pop7	85	71.756	Labrus_bergylta
ENSLACG00000010203	POP7	84	76.667	ENSLOCG00000017553	pop7	81	79.167	Lepisosteus_oculatus
ENSLACG00000010203	POP7	100	69.178	ENSLAFG00000030032	POP7	100	69.178	Loxodonta_africana
ENSLACG00000010203	POP7	100	72.603	ENSMFAG00000027783	POP7	100	72.603	Macaca_fascicularis
ENSLACG00000010203	POP7	100	72.603	ENSMMUG00000008581	POP7	100	72.603	Macaca_mulatta
ENSLACG00000010203	POP7	100	72.603	ENSMNEG00000037495	POP7	100	72.603	Macaca_nemestrina
ENSLACG00000010203	POP7	100	72.603	ENSMLEG00000027597	POP7	100	72.603	Mandrillus_leucophaeus
ENSLACG00000010203	POP7	87	77.600	ENSMAMG00000007258	pop7	89	77.600	Mastacembelus_armatus
ENSLACG00000010203	POP7	94	74.074	ENSMZEG00005022194	-	92	74.074	Maylandia_zebra
ENSLACG00000010203	POP7	79	82.301	ENSMZEG00005005138	pop7	86	82.301	Maylandia_zebra
ENSLACG00000010203	POP7	100	69.863	ENSMAUG00000015820	Pop7	100	69.863	Mesocricetus_auratus
ENSLACG00000010203	POP7	100	72.603	ENSMICG00000009398	POP7	100	72.603	Microcebus_murinus
ENSLACG00000010203	POP7	100	73.288	ENSMOCG00000013694	Pop7	100	73.288	Microtus_ochrogaster
ENSLACG00000010203	POP7	87	76.613	ENSMMOG00000014095	pop7	90	76.613	Mola_mola
ENSLACG00000010203	POP7	100	69.128	ENSMODG00000023662	POP7	100	69.799	Monodelphis_domestica
ENSLACG00000010203	POP7	84	79.167	ENSMALG00000011180	pop7	92	79.167	Monopterus_albus
ENSLACG00000010203	POP7	100	72.603	MGP_CAROLIEiJ_G0027876	Pop7	100	72.603	Mus_caroli
ENSLACG00000010203	POP7	100	72.603	ENSMUSG00000029715	Pop7	100	72.603	Mus_musculus
ENSLACG00000010203	POP7	100	72.603	MGP_PahariEiJ_G0024462	Pop7	100	72.603	Mus_pahari
ENSLACG00000010203	POP7	100	72.603	MGP_SPRETEiJ_G0028881	Pop7	100	72.603	Mus_spretus
ENSLACG00000010203	POP7	100	73.973	ENSMPUG00000019765	POP7	100	73.973	Mustela_putorius_furo
ENSLACG00000010203	POP7	100	73.288	ENSMLUG00000010110	POP7	100	73.288	Myotis_lucifugus
ENSLACG00000010203	POP7	100	71.918	ENSNGAG00000021630	Pop7	100	71.918	Nannospalax_galili
ENSLACG00000010203	POP7	83	79.832	ENSNBRG00000006286	pop7	87	79.832	Neolamprologus_brichardi
ENSLACG00000010203	POP7	100	73.288	ENSNLEG00000011939	POP7	100	73.288	Nomascus_leucogenys
ENSLACG00000010203	POP7	52	81.081	ENSOPRG00000015185	POP7	99	81.081	Ochotona_princeps
ENSLACG00000010203	POP7	100	73.288	ENSODEG00000020363	POP7	100	73.288	Octodon_degus
ENSLACG00000010203	POP7	100	70.922	ENSOANG00000001658	POP7	100	70.922	Ornithorhynchus_anatinus
ENSLACG00000010203	POP7	100	71.918	ENSOCUG00000007818	POP7	100	71.918	Oryctolagus_cuniculus
ENSLACG00000010203	POP7	85	80.328	ENSORLG00000003594	pop7	88	80.328	Oryzias_latipes
ENSLACG00000010203	POP7	96	73.723	ENSORLG00020017530	pop7	84	73.723	Oryzias_latipes_hni
ENSLACG00000010203	POP7	92	75.758	ENSORLG00015015310	pop7	96	75.758	Oryzias_latipes_hsok
ENSLACG00000010203	POP7	93	75.188	ENSOMEG00000003667	pop7	89	75.188	Oryzias_melastigma
ENSLACG00000010203	POP7	100	71.918	ENSOGAG00000009340	POP7	100	71.918	Otolemur_garnettii
ENSLACG00000010203	POP7	100	73.288	ENSPPAG00000015339	POP7	100	73.288	Pan_paniscus
ENSLACG00000010203	POP7	100	73.973	ENSPPRG00000018408	POP7	100	73.973	Panthera_pardus
ENSLACG00000010203	POP7	100	73.973	ENSPTIG00000005807	POP7	100	73.973	Panthera_tigris_altaica
ENSLACG00000010203	POP7	100	73.288	ENSPTRG00000047460	-	100	73.288	Pan_troglodytes
ENSLACG00000010203	POP7	100	73.288	ENSPTRG00000019504	POP7	100	73.288	Pan_troglodytes
ENSLACG00000010203	POP7	100	72.603	ENSPANG00000006196	POP7	100	72.603	Papio_anubis
ENSLACG00000010203	POP7	94	69.630	ENSPKIG00000019869	pop7	79	72.593	Paramormyrops_kingsleyae
ENSLACG00000010203	POP7	71	71.845	ENSPSIG00000000415	POP7	92	70.588	Pelodiscus_sinensis
ENSLACG00000010203	POP7	86	78.049	ENSPMGG00000011142	pop7	89	78.049	Periophthalmus_magnuspinnatus
ENSLACG00000010203	POP7	100	73.288	ENSPEMG00000011583	Pop7	100	73.288	Peromyscus_maniculatus_bairdii
ENSLACG00000010203	POP7	100	70.270	ENSPCIG00000000517	POP7	72	70.270	Phascolarctos_cinereus
ENSLACG00000010203	POP7	96	71.533	ENSPFOG00000019976	pop7	91	71.533	Poecilia_formosa
ENSLACG00000010203	POP7	96	71.533	ENSPLAG00000007700	pop7	91	71.533	Poecilia_latipinna
ENSLACG00000010203	POP7	96	71.533	ENSPMEG00000010673	pop7	91	71.533	Poecilia_mexicana
ENSLACG00000010203	POP7	96	71.533	ENSPREG00000015137	pop7	91	71.533	Poecilia_reticulata
ENSLACG00000010203	POP7	100	73.288	ENSPPYG00000017426	POP7	100	73.288	Pongo_abelii
ENSLACG00000010203	POP7	100	71.233	ENSPCAG00000010445	POP7	100	71.233	Procavia_capensis
ENSLACG00000010203	POP7	81	72.034	ENSPCOG00000018009	-	88	72.034	Propithecus_coquereli
ENSLACG00000010203	POP7	100	72.603	ENSPCOG00000009302	POP7	100	72.603	Propithecus_coquereli
ENSLACG00000010203	POP7	79	82.301	ENSPNYG00000000975	pop7	86	82.301	Pundamilia_nyererei
ENSLACG00000010203	POP7	83	81.667	ENSPNAG00000007206	pop7	86	81.667	Pygocentrus_nattereri
ENSLACG00000010203	POP7	100	72.603	ENSRNOG00000025310	Pop7	100	72.603	Rattus_norvegicus
ENSLACG00000010203	POP7	100	73.288	ENSRBIG00000002671	POP7	100	73.288	Rhinopithecus_bieti
ENSLACG00000010203	POP7	100	73.288	ENSRROG00000028543	POP7	100	73.288	Rhinopithecus_roxellana
ENSLACG00000010203	POP7	100	71.918	ENSSBOG00000005173	POP7	100	71.918	Saimiri_boliviensis_boliviensis
ENSLACG00000010203	POP7	88	74.809	ENSSHAG00000001026	POP7	100	69.595	Sarcophilus_harrisii
ENSLACG00000010203	POP7	83	79.167	ENSSFOG00015007957	pop7	82	79.167	Scleropages_formosus
ENSLACG00000010203	POP7	86	78.049	ENSSMAG00000015536	pop7	91	78.049	Scophthalmus_maximus
ENSLACG00000010203	POP7	89	77.165	ENSSDUG00000022172	pop7	86	77.165	Seriola_dumerili
ENSLACG00000010203	POP7	78	75.000	ENSSLDG00000019818	pop7	91	75.000	Seriola_lalandi_dorsalis
ENSLACG00000010203	POP7	92	75.758	ENSSPAG00000000652	pop7	81	75.758	Stegastes_partitus
ENSLACG00000010203	POP7	100	72.603	ENSSSCG00000007672	POP7	100	72.603	Sus_scrofa
ENSLACG00000010203	POP7	87	76.800	ENSTRUG00000024340	-	91	76.800	Takifugu_rubripes
ENSLACG00000010203	POP7	95	72.993	ENSTRUG00000023845	pop7	91	72.993	Takifugu_rubripes
ENSLACG00000010203	POP7	96	73.381	ENSTNIG00000001259	pop7	92	73.381	Tetraodon_nigroviridis
ENSLACG00000010203	POP7	100	73.288	ENSTBEG00000001849	POP7	100	73.288	Tupaia_belangeri
ENSLACG00000010203	POP7	100	72.603	ENSTTRG00000011012	POP7	100	72.603	Tursiops_truncatus
ENSLACG00000010203	POP7	100	73.288	ENSUAMG00000028076	POP7	100	73.288	Ursus_americanus
ENSLACG00000010203	POP7	100	73.288	ENSUMAG00000010895	POP7	100	73.288	Ursus_maritimus
ENSLACG00000010203	POP7	100	73.973	ENSVVUG00000023472	POP7	100	73.973	Vulpes_vulpes
ENSLACG00000010203	POP7	96	70.803	ENSXCOG00000012016	pop7	90	70.803	Xiphophorus_couchianus
ENSLACG00000010203	POP7	96	71.533	ENSXMAG00000019746	pop7	91	71.533	Xiphophorus_maculatus