EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1534 bases
Position: chrJH126649.1:483377-484910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011620	RVT_1	PF00078.27	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011709	-	708	-	ENSLACP00000011620	236 (aa)	-	H3APP9

Gene Model

Click here to download ENSLACG00000010227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010227	-	75	37.297	ENSLACG00000010373	-	77	37.297
ENSLACG00000010227	-	83	33.333	ENSLACG00000002249	-	75	33.333
ENSLACG00000010227	-	92	35.714	ENSLACG00000001892	-	64	35.714
ENSLACG00000010227	-	82	32.039	ENSLACG00000000714	-	99	32.487
ENSLACG00000010227	-	97	30.417	ENSLACG00000003900	-	75	30.417
ENSLACG00000010227	-	55	32.432	ENSLACG00000005904	-	52	32.432
ENSLACG00000010227	-	77	37.234	ENSLACG00000016284	-	86	37.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010227	-	100	30.041	ENSAPOG00000008925	-	67	30.041	Acanthochromis_polyacanthus
ENSLACG00000010227	-	100	41.393	ENSAPEG00000005752	-	57	41.393	Amphiprion_percula
ENSLACG00000010227	-	79	43.455	ENSACLG00000010403	-	62	43.455	Astatotilapia_calliptera
ENSLACG00000010227	-	89	34.167	ENSACLG00000006798	-	75	34.583	Astatotilapia_calliptera
ENSLACG00000010227	-	94	39.912	ENSACLG00000013847	-	52	39.912	Astatotilapia_calliptera
ENSLACG00000010227	-	94	39.474	ENSACLG00000013289	-	67	39.474	Astatotilapia_calliptera
ENSLACG00000010227	-	91	33.778	ENSACLG00000006549	-	61	33.778	Astatotilapia_calliptera
ENSLACG00000010227	-	91	35.111	ENSACLG00000021935	-	68	35.111	Astatotilapia_calliptera
ENSLACG00000010227	-	94	46.053	ENSAMXG00000031032	-	60	46.053	Astyanax_mexicanus
ENSLACG00000010227	-	100	37.860	ENSCPBG00000001119	-	52	37.860	Chrysemys_picta_bellii
ENSLACG00000010227	-	92	30.837	ENSEBUG00000000828	-	62	30.837	Eptatretus_burgeri
ENSLACG00000010227	-	89	33.884	ENSGAFG00000008149	-	84	33.884	Gambusia_affinis
ENSLACG00000010227	-	80	30.808	ENSGAGG00000022131	-	65	30.808	Gopherus_agassizii
ENSLACG00000010227	-	88	31.776	ENSGAGG00000022000	-	76	31.776	Gopherus_agassizii
ENSLACG00000010227	-	94	46.288	ENSHBUG00000009088	-	62	46.288	Haplochromis_burtoni
ENSLACG00000010227	-	100	30.453	ENSLBEG00000003912	-	62	30.453	Labrus_bergylta
ENSLACG00000010227	-	100	39.095	ENSMALG00000005075	-	75	39.095	Monopterus_albus
ENSLACG00000010227	-	85	56.522	ENSMALG00000020245	-	74	56.522	Monopterus_albus
ENSLACG00000010227	-	94	46.491	ENSNBRG00000002477	-	67	46.491	Neolamprologus_brichardi
ENSLACG00000010227	-	100	37.860	ENSNBRG00000002791	-	78	37.860	Neolamprologus_brichardi
ENSLACG00000010227	-	89	32.569	ENSONIG00000018991	-	75	32.569	Oreochromis_niloticus
ENSLACG00000010227	-	78	40.526	ENSORLG00000026658	-	78	40.526	Oryzias_latipes
ENSLACG00000010227	-	78	33.005	ENSORLG00000022742	-	54	33.005	Oryzias_latipes
ENSLACG00000010227	-	92	32.035	ENSORLG00000022411	-	62	32.035	Oryzias_latipes
ENSLACG00000010227	-	100	34.568	ENSORLG00020016924	-	57	34.568	Oryzias_latipes_hni
ENSLACG00000010227	-	94	49.561	ENSORLG00020012706	-	57	49.561	Oryzias_latipes_hni
ENSLACG00000010227	-	94	50.877	ENSORLG00020000154	-	56	50.877	Oryzias_latipes_hni
ENSLACG00000010227	-	89	51.852	ENSORLG00020016252	-	56	51.852	Oryzias_latipes_hni
ENSLACG00000010227	-	78	32.512	ENSORLG00020004454	-	51	32.512	Oryzias_latipes_hni
ENSLACG00000010227	-	92	33.040	ENSORLG00020021288	-	70	33.040	Oryzias_latipes_hni
ENSLACG00000010227	-	78	33.684	ENSORLG00020002705	-	59	33.684	Oryzias_latipes_hni
ENSLACG00000010227	-	93	46.460	ENSORLG00015021822	-	59	46.460	Oryzias_latipes_hsok
ENSLACG00000010227	-	81	30.348	ENSOMEG00000007764	-	67	30.348	Oryzias_melastigma
ENSLACG00000010227	-	99	35.950	ENSPKIG00000019619	-	85	35.950	Paramormyrops_kingsleyae
ENSLACG00000010227	-	94	42.358	ENSPKIG00000007140	-	52	42.358	Paramormyrops_kingsleyae
ENSLACG00000010227	-	89	36.250	ENSPKIG00000004057	-	53	36.250	Paramormyrops_kingsleyae
ENSLACG00000010227	-	92	32.751	ENSPSIG00000000367	-	52	32.751	Pelodiscus_sinensis
ENSLACG00000010227	-	92	32.456	ENSPSIG00000001197	-	56	32.456	Pelodiscus_sinensis
ENSLACG00000010227	-	85	39.423	ENSPSIG00000000007	-	52	39.423	Pelodiscus_sinensis
ENSLACG00000010227	-	92	31.140	ENSPSIG00000001757	-	56	31.140	Pelodiscus_sinensis
ENSLACG00000010227	-	92	32.018	ENSPSIG00000001800	-	50	32.018	Pelodiscus_sinensis
ENSLACG00000010227	-	85	39.130	ENSPSIG00000002033	-	63	39.130	Pelodiscus_sinensis
ENSLACG00000010227	-	81	45.226	ENSPNYG00000004598	-	66	45.226	Pundamilia_nyererei
ENSLACG00000010227	-	94	50.439	ENSPNAG00000015949	-	59	50.439	Pygocentrus_nattereri
ENSLACG00000010227	-	86	33.493	ENSPNAG00000001979	-	81	33.493	Pygocentrus_nattereri
ENSLACG00000010227	-	91	32.444	ENSTRUG00000024970	-	73	32.444	Takifugu_rubripes
ENSLACG00000010227	-	90	33.333	ENSXMAG00000027711	-	72	33.333	Xiphophorus_maculatus