EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010243 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 20400 bases
Position: chrJH127902.1:485586-505985
Accession: 102355867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011639	FRG1	PF06229.12	5.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011728	-	987	XM_006006418	ENSLACP00000011639	261 (aa)	-	H3APR8

Gene Model

Click here to download ENSLACG00000010243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010243	frg1	100	71.756	ENSG00000109536	FRG1	100	81.897	Homo_sapiens
ENSLACG00000010243	frg1	100	64.751	ENSAPOG00000001060	frg1	100	64.751	Acanthochromis_polyacanthus
ENSLACG00000010243	frg1	100	71.756	ENSAMEG00000013503	FRG1	100	71.756	Ailuropoda_melanoleuca
ENSLACG00000010243	frg1	87	66.814	ENSACIG00000022283	frg1	100	66.814	Amphilophus_citrinellus
ENSLACG00000010243	frg1	87	66.814	ENSAOCG00000024240	frg1	87	66.814	Amphiprion_ocellaris
ENSLACG00000010243	frg1	100	64.368	ENSAPEG00000002486	frg1	100	64.368	Amphiprion_percula
ENSLACG00000010243	frg1	100	63.985	ENSATEG00000010414	frg1	100	63.985	Anabas_testudineus
ENSLACG00000010243	frg1	100	72.414	ENSAPLG00000007785	-	100	70.881	Anas_platyrhynchos
ENSLACG00000010243	frg1	100	70.498	ENSACAG00000006877	-	100	68.966	Anolis_carolinensis
ENSLACG00000010243	frg1	100	69.084	ENSANAG00000020876	FRG1	100	69.847	Aotus_nancymaae
ENSLACG00000010243	frg1	100	62.595	ENSACLG00000027065	frg1	100	61.977	Astatotilapia_calliptera
ENSLACG00000010243	frg1	100	64.504	ENSAMXG00000032700	frg1	100	64.504	Astyanax_mexicanus
ENSLACG00000010243	frg1	100	71.756	ENSBTAG00000007089	FRG1	100	71.756	Bos_taurus
ENSLACG00000010243	frg1	99	35.766	WBGene00014177	frg-1	82	37.555	Caenorhabditis_elegans
ENSLACG00000010243	frg1	100	69.084	ENSCJAG00000011272	FRG1	100	69.847	Callithrix_jacchus
ENSLACG00000010243	frg1	100	71.756	ENSCAFG00000007135	FRG1	100	71.756	Canis_familiaris
ENSLACG00000010243	frg1	82	72.430	ENSCAFG00020000082	-	85	72.430	Canis_lupus_dingo
ENSLACG00000010243	frg1	100	71.756	ENSCHIG00000011585	-	100	71.756	Capra_hircus
ENSLACG00000010243	frg1	98	50.775	ENSTSYG00000031599	-	100	50.775	Carlito_syrichta
ENSLACG00000010243	frg1	89	69.828	ENSCAPG00000016056	-	92	70.306	Cavia_aperea
ENSLACG00000010243	frg1	100	68.702	ENSCPOG00000022277	-	100	69.466	Cavia_porcellus
ENSLACG00000010243	frg1	100	69.084	ENSCCAG00000024627	FRG1	100	69.847	Cebus_capucinus
ENSLACG00000010243	frg1	100	71.374	ENSCATG00000029230	FRG1	100	71.374	Cercocebus_atys
ENSLACG00000010243	frg1	74	58.163	ENSCLAG00000009263	-	87	57.360	Chinchilla_lanigera
ENSLACG00000010243	frg1	100	69.084	ENSCLAG00000000370	-	100	69.847	Chinchilla_lanigera
ENSLACG00000010243	frg1	100	50.192	ENSCLAG00000006068	-	100	50.192	Chinchilla_lanigera
ENSLACG00000010243	frg1	100	59.924	ENSCLAG00000004960	-	100	59.924	Chinchilla_lanigera
ENSLACG00000010243	frg1	83	67.742	ENSCSAG00000017729	-	99	67.742	Chlorocebus_sabaeus
ENSLACG00000010243	frg1	100	71.374	ENSCSAG00000002899	FRG1	100	71.374	Chlorocebus_sabaeus
ENSLACG00000010243	frg1	87	72.807	ENSCPBG00000009211	-	87	72.807	Chrysemys_picta_bellii
ENSLACG00000010243	frg1	99	47.601	ENSCING00000005161	-	99	47.232	Ciona_intestinalis
ENSLACG00000010243	frg1	68	48.634	ENSCSAVG00000008018	-	100	50.273	Ciona_savignyi
ENSLACG00000010243	frg1	100	71.374	ENSCANG00000020991	FRG1	100	71.374	Colobus_angolensis_palliatus
ENSLACG00000010243	frg1	100	72.519	ENSCGRG00001014998	Frg1	97	80.000	Cricetulus_griseus_chok1gshd
ENSLACG00000010243	frg1	100	72.519	ENSCGRG00000011860	-	100	72.519	Cricetulus_griseus_crigri
ENSLACG00000010243	frg1	100	56.107	ENSCGRG00000003902	-	96	54.198	Cricetulus_griseus_crigri
ENSLACG00000010243	frg1	87	61.404	ENSCSEG00000015950	frg1	92	61.404	Cynoglossus_semilaevis
ENSLACG00000010243	frg1	100	63.602	ENSCVAG00000009985	frg1	100	63.602	Cyprinodon_variegatus
ENSLACG00000010243	frg1	100	65.900	ENSDARG00000056504	frg1	93	78.358	Danio_rerio
ENSLACG00000010243	frg1	100	71.756	ENSDNOG00000014886	FRG1	100	71.756	Dasypus_novemcinctus
ENSLACG00000010243	frg1	100	60.305	ENSDORG00000016190	Frg1	100	60.687	Dipodomys_ordii
ENSLACG00000010243	frg1	82	47.685	FBgn0036964	FRG1	100	44.528	Drosophila_melanogaster
ENSLACG00000010243	frg1	100	70.992	ENSETEG00000012349	-	100	70.992	Echinops_telfairi
ENSLACG00000010243	frg1	57	44.667	ENSEBUG00000012359	FRG1	89	44.667	Eptatretus_burgeri
ENSLACG00000010243	frg1	100	71.374	ENSEASG00005017497	FRG1	100	70.229	Equus_asinus_asinus
ENSLACG00000010243	frg1	100	71.374	ENSECAG00000003122	FRG1	100	70.229	Equus_caballus
ENSLACG00000010243	frg1	53	78.986	ENSEEUG00000000145	-	88	78.986	Erinaceus_europaeus
ENSLACG00000010243	frg1	100	63.218	ENSELUG00000021712	frg1	100	63.218	Esox_lucius
ENSLACG00000010243	frg1	100	71.756	ENSFCAG00000025737	FRG1	100	71.756	Felis_catus
ENSLACG00000010243	frg1	87	70.796	ENSFALG00000011231	-	88	71.053	Ficedula_albicollis
ENSLACG00000010243	frg1	100	70.992	ENSFDAG00000000962	-	100	69.466	Fukomys_damarensis
ENSLACG00000010243	frg1	100	60.606	ENSFDAG00000012697	-	98	71.296	Fukomys_damarensis
ENSLACG00000010243	frg1	100	63.602	ENSFHEG00000010540	frg1	100	63.602	Fundulus_heteroclitus
ENSLACG00000010243	frg1	100	61.303	ENSGMOG00000000867	frg1	100	62.452	Gadus_morhua
ENSLACG00000010243	frg1	100	71.264	ENSGALG00000013590	-	100	69.732	Gallus_gallus
ENSLACG00000010243	frg1	81	61.611	ENSGAFG00000013855	frg1	100	61.611	Gambusia_affinis
ENSLACG00000010243	frg1	100	64.368	ENSGACG00000016888	frg1	100	62.069	Gasterosteus_aculeatus
ENSLACG00000010243	frg1	100	72.414	ENSGAGG00000025012	-	100	70.881	Gopherus_agassizii
ENSLACG00000010243	frg1	66	74.138	ENSGGOG00000012888	-	88	74.138	Gorilla_gorilla
ENSLACG00000010243	frg1	100	46.591	ENSGGOG00000040796	-	100	46.591	Gorilla_gorilla
ENSLACG00000010243	frg1	100	64.122	ENSHBUG00000010667	frg1	100	64.122	Haplochromis_burtoni
ENSLACG00000010243	frg1	99	64.368	ENSHGLG00000020943	-	99	65.134	Heterocephalus_glaber_female
ENSLACG00000010243	frg1	99	66.667	ENSHGLG00000020402	-	94	67.433	Heterocephalus_glaber_female
ENSLACG00000010243	frg1	100	59.160	ENSHGLG00000001211	-	100	60.305	Heterocephalus_glaber_female
ENSLACG00000010243	frg1	100	68.702	ENSHGLG00000005601	FRG1	100	69.466	Heterocephalus_glaber_female
ENSLACG00000010243	frg1	100	69.084	ENSHGLG00100016261	-	100	69.847	Heterocephalus_glaber_male
ENSLACG00000010243	frg1	99	64.368	ENSHGLG00100021211	-	99	65.134	Heterocephalus_glaber_male
ENSLACG00000010243	frg1	100	56.654	ENSHGLG00100015285	-	100	56.654	Heterocephalus_glaber_male
ENSLACG00000010243	frg1	100	59.542	ENSHGLG00100010674	-	100	60.687	Heterocephalus_glaber_male
ENSLACG00000010243	frg1	87	63.436	ENSHCOG00000000224	frg1	95	63.596	Hippocampus_comes
ENSLACG00000010243	frg1	100	67.045	ENSIPUG00000022716	frg1	100	67.045	Ictalurus_punctatus
ENSLACG00000010243	frg1	100	71.756	ENSSTOG00000002857	-	100	71.756	Ictidomys_tridecemlineatus
ENSLACG00000010243	frg1	100	71.756	ENSJJAG00000020625	Frg1	100	71.756	Jaculus_jaculus
ENSLACG00000010243	frg1	100	62.835	ENSKMAG00000005841	frg1	100	62.835	Kryptolebias_marmoratus
ENSLACG00000010243	frg1	100	60.920	ENSLBEG00000001466	frg1	100	63.507	Labrus_bergylta
ENSLACG00000010243	frg1	100	68.966	ENSLOCG00000013868	frg1	100	68.966	Lepisosteus_oculatus
ENSLACG00000010243	frg1	100	70.992	ENSLAFG00000011191	FRG1	100	70.992	Loxodonta_africana
ENSLACG00000010243	frg1	100	71.374	ENSMFAG00000031178	FRG1	100	71.374	Macaca_fascicularis
ENSLACG00000010243	frg1	82	62.500	ENSMFAG00000042873	-	82	70.130	Macaca_fascicularis
ENSLACG00000010243	frg1	69	66.667	ENSMMUG00000047496	-	78	66.667	Macaca_mulatta
ENSLACG00000010243	frg1	100	71.374	ENSMMUG00000001824	FRG1	100	71.374	Macaca_mulatta
ENSLACG00000010243	frg1	87	69.869	ENSMNEG00000018620	FRG1	92	69.869	Macaca_nemestrina
ENSLACG00000010243	frg1	100	71.374	ENSMLEG00000028881	FRG1	100	71.374	Mandrillus_leucophaeus
ENSLACG00000010243	frg1	100	62.835	ENSMAMG00000012406	frg1	100	62.835	Mastacembelus_armatus
ENSLACG00000010243	frg1	100	64.122	ENSMZEG00005007549	frg1	100	64.122	Maylandia_zebra
ENSLACG00000010243	frg1	100	71.648	ENSMGAG00000011481	-	100	70.115	Meleagris_gallopavo
ENSLACG00000010243	frg1	100	72.519	ENSMAUG00000000847	Frg1	100	72.519	Mesocricetus_auratus
ENSLACG00000010243	frg1	100	72.137	ENSMICG00000046816	FRG1	100	72.137	Microcebus_murinus
ENSLACG00000010243	frg1	100	67.050	ENSMOCG00000023000	Frg1	100	67.050	Microtus_ochrogaster
ENSLACG00000010243	frg1	85	64.126	ENSMMOG00000004008	frg1	93	64.126	Mola_mola
ENSLACG00000010243	frg1	100	70.611	ENSMODG00000019031	-	87	70.611	Monodelphis_domestica
ENSLACG00000010243	frg1	100	61.686	ENSMALG00000018497	frg1	100	61.303	Monopterus_albus
ENSLACG00000010243	frg1	100	72.137	MGP_CAROLIEiJ_G0031006	Frg1	100	72.137	Mus_caroli
ENSLACG00000010243	frg1	100	72.137	ENSMUSG00000031590	Frg1	100	72.137	Mus_musculus
ENSLACG00000010243	frg1	100	71.756	MGP_PahariEiJ_G0021475	Frg1	100	71.756	Mus_pahari
ENSLACG00000010243	frg1	100	71.756	MGP_SPRETEiJ_G0032120	Frg1	100	71.756	Mus_spretus
ENSLACG00000010243	frg1	100	71.756	ENSMPUG00000017962	FRG1	100	71.756	Mustela_putorius_furo
ENSLACG00000010243	frg1	100	69.084	ENSMLUG00000023179	FRG1	100	69.847	Myotis_lucifugus
ENSLACG00000010243	frg1	100	72.901	ENSNGAG00000016411	Frg1	100	72.901	Nannospalax_galili
ENSLACG00000010243	frg1	81	67.773	ENSNBRG00000006806	frg1	95	66.981	Neolamprologus_brichardi
ENSLACG00000010243	frg1	100	49.618	ENSNLEG00000032846	-	100	59.649	Nomascus_leucogenys
ENSLACG00000010243	frg1	78	63.725	ENSNLEG00000028874	-	91	63.725	Nomascus_leucogenys
ENSLACG00000010243	frg1	100	62.172	ENSNLEG00000035849	-	100	62.172	Nomascus_leucogenys
ENSLACG00000010243	frg1	100	70.229	ENSNLEG00000000930	FRG1	100	69.466	Nomascus_leucogenys
ENSLACG00000010243	frg1	100	58.491	ENSNLEG00000032333	-	100	58.113	Nomascus_leucogenys
ENSLACG00000010243	frg1	71	67.380	ENSNLEG00000036059	-	82	71.429	Nomascus_leucogenys
ENSLACG00000010243	frg1	59	66.883	ENSMEUG00000007509	-	59	66.883	Notamacropus_eugenii
ENSLACG00000010243	frg1	100	67.557	ENSOPRG00000004722	-	100	67.557	Ochotona_princeps
ENSLACG00000010243	frg1	100	69.084	ENSODEG00000006458	-	100	69.847	Octodon_degus
ENSLACG00000010243	frg1	100	53.435	ENSODEG00000006953	-	100	53.435	Octodon_degus
ENSLACG00000010243	frg1	100	63.118	ENSONIG00000010162	frg1	100	63.118	Oreochromis_niloticus
ENSLACG00000010243	frg1	70	66.484	ENSOANG00000005659	-	80	66.484	Ornithorhynchus_anatinus
ENSLACG00000010243	frg1	100	71.756	ENSOCUG00000009038	-	100	71.756	Oryctolagus_cuniculus
ENSLACG00000010243	frg1	87	63.158	ENSORLG00000008106	frg1	82	63.158	Oryzias_latipes
ENSLACG00000010243	frg1	100	62.069	ENSORLG00020014355	frg1	100	62.069	Oryzias_latipes_hni
ENSLACG00000010243	frg1	100	62.069	ENSORLG00015014159	frg1	100	62.069	Oryzias_latipes_hsok
ENSLACG00000010243	frg1	90	62.447	ENSOMEG00000002468	frg1	96	62.447	Oryzias_melastigma
ENSLACG00000010243	frg1	100	70.992	ENSOGAG00000005749	-	100	70.992	Otolemur_garnettii
ENSLACG00000010243	frg1	100	70.229	ENSOARG00000008592	FRG1	100	70.229	Ovis_aries
ENSLACG00000010243	frg1	83	77.982	ENSPPAG00000043170	-	99	78.704	Pan_paniscus
ENSLACG00000010243	frg1	96	51.923	ENSPPAG00000043174	-	100	51.923	Pan_paniscus
ENSLACG00000010243	frg1	100	67.176	ENSPPRG00000019777	-	100	67.939	Panthera_pardus
ENSLACG00000010243	frg1	100	71.374	ENSPPRG00000025003	-	100	71.374	Panthera_pardus
ENSLACG00000010243	frg1	100	67.557	ENSPTIG00000006566	-	100	68.321	Panthera_tigris_altaica
ENSLACG00000010243	frg1	100	71.756	ENSPTIG00000006588	-	100	71.756	Panthera_tigris_altaica
ENSLACG00000010243	frg1	87	58.150	ENSPTRG00000052363	-	90	58.150	Pan_troglodytes
ENSLACG00000010243	frg1	87	63.203	ENSPTRG00000043123	-	92	63.203	Pan_troglodytes
ENSLACG00000010243	frg1	100	71.756	ENSPTRG00000016671	-	100	71.756	Pan_troglodytes
ENSLACG00000010243	frg1	87	59.740	ENSPTRG00000044710	-	91	59.740	Pan_troglodytes
ENSLACG00000010243	frg1	100	71.756	ENSPTRG00000050205	-	100	71.756	Pan_troglodytes
ENSLACG00000010243	frg1	88	59.494	ENSPTRG00000050204	-	96	59.494	Pan_troglodytes
ENSLACG00000010243	frg1	69	71.429	ENSPANG00000031530	-	84	71.429	Papio_anubis
ENSLACG00000010243	frg1	100	64.751	ENSPKIG00000024189	frg1	100	64.751	Paramormyrops_kingsleyae
ENSLACG00000010243	frg1	83	75.463	ENSPSIG00000017971	-	82	75.463	Pelodiscus_sinensis
ENSLACG00000010243	frg1	98	60.000	ENSPMGG00000019273	frg1	99	60.000	Periophthalmus_magnuspinnatus
ENSLACG00000010243	frg1	100	72.519	ENSPEMG00000000650	Frg1	100	72.519	Peromyscus_maniculatus_bairdii
ENSLACG00000010243	frg1	100	67.939	ENSPCIG00000007530	-	69	67.939	Phascolarctos_cinereus
ENSLACG00000010243	frg1	100	60.837	ENSPFOG00000006721	frg1	100	62.357	Poecilia_formosa
ENSLACG00000010243	frg1	100	59.387	ENSPMEG00000013816	frg1	100	59.387	Poecilia_mexicana
ENSLACG00000010243	frg1	100	59.387	ENSPREG00000000097	frg1	100	59.387	Poecilia_reticulata
ENSLACG00000010243	frg1	53	72.464	ENSPPYG00000011275	-	76	72.464	Pongo_abelii
ENSLACG00000010243	frg1	55	82.069	ENSPPYG00000029810	-	100	82.069	Pongo_abelii
ENSLACG00000010243	frg1	87	73.362	ENSPCAG00000014953	-	92	73.362	Procavia_capensis
ENSLACG00000010243	frg1	78	64.878	ENSPCOG00000022726	FRG1	94	64.878	Propithecus_coquereli
ENSLACG00000010243	frg1	100	58.397	ENSPVAG00000010551	FRG1	100	58.397	Pteropus_vampyrus
ENSLACG00000010243	frg1	67	66.092	ENSPNYG00000015209	frg1	74	66.092	Pundamilia_nyererei
ENSLACG00000010243	frg1	100	63.218	ENSPNAG00000013259	frg1	100	62.835	Pygocentrus_nattereri
ENSLACG00000010243	frg1	100	70.992	ENSRNOG00000009846	Frg1	100	70.992	Rattus_norvegicus
ENSLACG00000010243	frg1	87	74.890	ENSRBIG00000042219	-	94	74.890	Rhinopithecus_bieti
ENSLACG00000010243	frg1	100	68.321	ENSRROG00000015523	FRG1	100	68.321	Rhinopithecus_roxellana
ENSLACG00000010243	frg1	81	67.136	ENSRROG00000032084	-	88	67.136	Rhinopithecus_roxellana
ENSLACG00000010243	frg1	100	69.084	ENSSBOG00000034175	FRG1	100	69.847	Saimiri_boliviensis_boliviensis
ENSLACG00000010243	frg1	100	70.229	ENSSHAG00000005886	-	100	70.229	Sarcophilus_harrisii
ENSLACG00000010243	frg1	87	70.614	ENSSFOG00015021361	frg1	90	70.614	Scleropages_formosus
ENSLACG00000010243	frg1	100	60.536	ENSSMAG00000001213	frg1	100	60.536	Scophthalmus_maximus
ENSLACG00000010243	frg1	100	63.602	ENSSDUG00000018886	frg1	100	63.602	Seriola_dumerili
ENSLACG00000010243	frg1	100	64.368	ENSSLDG00000024191	frg1	100	64.368	Seriola_lalandi_dorsalis
ENSLACG00000010243	frg1	65	79.532	ENSSARG00000002471	-	94	78.090	Sorex_araneus
ENSLACG00000010243	frg1	100	68.199	ENSSPUG00000017326	-	97	77.934	Sphenodon_punctatus
ENSLACG00000010243	frg1	100	61.423	ENSSPAG00000013294	frg1	100	62.452	Stegastes_partitus
ENSLACG00000010243	frg1	100	71.756	ENSSSCG00000006996	FRG1	100	71.756	Sus_scrofa
ENSLACG00000010243	frg1	100	71.264	ENSTGUG00000007028	-	100	70.881	Taeniopygia_guttata
ENSLACG00000010243	frg1	100	62.835	ENSTRUG00000016208	frg1	100	62.835	Takifugu_rubripes
ENSLACG00000010243	frg1	100	60.153	ENSTNIG00000007128	frg1	100	60.153	Tetraodon_nigroviridis
ENSLACG00000010243	frg1	82	51.174	ENSTBEG00000012789	-	99	51.174	Tupaia_belangeri
ENSLACG00000010243	frg1	71	50.538	ENSTBEG00000017605	-	96	50.538	Tupaia_belangeri
ENSLACG00000010243	frg1	100	72.519	ENSTBEG00000014491	-	100	72.519	Tupaia_belangeri
ENSLACG00000010243	frg1	100	71.756	ENSTTRG00000003429	FRG1	100	71.756	Tursiops_truncatus
ENSLACG00000010243	frg1	87	70.742	ENSUAMG00000012123	-	92	70.742	Ursus_americanus
ENSLACG00000010243	frg1	100	71.756	ENSUMAG00000021119	FRG1	100	71.756	Ursus_maritimus
ENSLACG00000010243	frg1	100	70.229	ENSVPAG00000000616	FRG1	100	70.229	Vicugna_pacos
ENSLACG00000010243	frg1	87	70.306	ENSVPAG00000011977	-	95	70.306	Vicugna_pacos
ENSLACG00000010243	frg1	82	72.430	ENSVVUG00000007181	-	77	72.430	Vulpes_vulpes
ENSLACG00000010243	frg1	100	67.816	ENSXETG00000012470	frg1	100	66.284	Xenopus_tropicalis
ENSLACG00000010243	frg1	100	59.387	ENSXCOG00000005312	frg1	100	58.621	Xiphophorus_couchianus
ENSLACG00000010243	frg1	100	59.387	ENSXMAG00000007751	frg1	100	59.387	Xiphophorus_maculatus