EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010373 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 738 bases
Position: chrJH126986.1:497578-498315
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011782	RVT_1	PF00078.27	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011872	-	720	-	ENSLACP00000011782	240 (aa)	-	H3AQ61

Gene Model

Click here to download ENSLACG00000010373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010373	-	50	36.364	ENSLACG00000002617	-	74	36.364
ENSLACG00000010373	-	77	37.297	ENSLACG00000010227	-	75	37.297
ENSLACG00000010373	-	90	31.858	ENSLACG00000004732	-	67	31.858
ENSLACG00000010373	-	85	36.190	ENSLACG00000016284	-	77	36.301
ENSLACG00000010373	-	67	35.976	ENSLACG00000000714	-	84	35.976
ENSLACG00000010373	-	76	30.769	ENSLACG00000000981	-	88	30.769
ENSLACG00000010373	-	55	31.852	ENSLACG00000014604	-	72	31.852
ENSLACG00000010373	-	77	34.239	ENSLACG00000001892	-	52	34.239
ENSLACG00000010373	-	79	31.884	ENSLACG00000005904	-	73	31.884
ENSLACG00000010373	-	60	38.667	ENSLACG00000011328	-	65	38.667
ENSLACG00000010373	-	83	30.516	ENSLACG00000003900	-	66	30.516
ENSLACG00000010373	-	70	34.731	ENSLACG00000002249	-	62	34.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010373	-	99	33.607	ENSAPOG00000008925	-	68	33.607	Acanthochromis_polyacanthus
ENSLACG00000010373	-	86	33.962	ENSAPEG00000005752	-	51	33.962	Amphiprion_percula
ENSLACG00000010373	-	100	34.959	ENSACLG00000013847	-	57	34.959	Astatotilapia_calliptera
ENSLACG00000010373	-	77	31.731	ENSACLG00000006798	-	66	31.731	Astatotilapia_calliptera
ENSLACG00000010373	-	77	36.898	ENSACLG00000006549	-	52	36.898	Astatotilapia_calliptera
ENSLACG00000010373	-	70	39.053	ENSACLG00000010403	-	54	39.053	Astatotilapia_calliptera
ENSLACG00000010373	-	100	33.740	ENSACLG00000013289	-	73	33.740	Astatotilapia_calliptera
ENSLACG00000010373	-	77	35.829	ENSACLG00000021935	-	57	35.829	Astatotilapia_calliptera
ENSLACG00000010373	-	100	36.992	ENSAMXG00000031032	-	65	36.992	Astyanax_mexicanus
ENSLACG00000010373	-	100	38.462	ENSAMXG00000038502	-	50	38.462	Astyanax_mexicanus
ENSLACG00000010373	-	100	58.537	ENSCPBG00000001119	-	54	58.537	Chrysemys_picta_bellii
ENSLACG00000010373	-	65	37.342	ENSCPBG00000001687	-	52	37.342	Chrysemys_picta_bellii
ENSLACG00000010373	-	100	30.242	ENSEBUG00000000828	-	70	30.242	Eptatretus_burgeri
ENSLACG00000010373	-	95	30.638	ENSEBUG00000001810	-	62	30.638	Eptatretus_burgeri
ENSLACG00000010373	-	77	32.057	ENSGAFG00000008149	-	74	32.057	Gambusia_affinis
ENSLACG00000010373	-	74	49.153	ENSGAGG00000022000	-	63	49.153	Gopherus_agassizii
ENSLACG00000010373	-	65	36.709	ENSGAGG00000022131	-	52	36.709	Gopherus_agassizii
ENSLACG00000010373	-	99	42.387	ENSGAGG00000011063	-	50	42.387	Gopherus_agassizii
ENSLACG00000010373	-	99	36.327	ENSHBUG00000009088	-	67	36.327	Haplochromis_burtoni
ENSLACG00000010373	-	99	33.607	ENSLBEG00000003912	-	63	33.607	Labrus_bergylta
ENSLACG00000010373	-	100	36.585	ENSLOCG00000017292	-	75	36.585	Lepisosteus_oculatus
ENSLACG00000010373	-	70	34.320	ENSMALG00000020245	-	62	34.320	Monopterus_albus
ENSLACG00000010373	-	87	38.140	ENSMALG00000005075	-	68	38.140	Monopterus_albus
ENSLACG00000010373	-	92	37.168	ENSNBRG00000002477	-	67	37.168	Neolamprologus_brichardi
ENSLACG00000010373	-	77	40.541	ENSNBRG00000002791	-	61	40.541	Neolamprologus_brichardi
ENSLACG00000010373	-	77	32.258	ENSONIG00000018991	-	65	32.258	Oreochromis_niloticus
ENSLACG00000010373	-	77	40.323	ENSORLG00000022411	-	52	40.323	Oryzias_latipes
ENSLACG00000010373	-	99	36.885	ENSORLG00000027869	-	54	36.885	Oryzias_latipes
ENSLACG00000010373	-	92	33.040	ENSORLG00000026658	-	93	33.040	Oryzias_latipes
ENSLACG00000010373	-	100	59.756	ENSORLG00020016924	-	59	59.756	Oryzias_latipes_hni
ENSLACG00000010373	-	96	40.336	ENSORLG00020021288	-	74	40.336	Oryzias_latipes_hni
ENSLACG00000010373	-	100	39.431	ENSORLG00020016252	-	65	39.431	Oryzias_latipes_hni
ENSLACG00000010373	-	100	34.959	ENSORLG00020012706	-	62	34.959	Oryzias_latipes_hni
ENSLACG00000010373	-	100	34.959	ENSORLG00020000154	-	61	34.959	Oryzias_latipes_hni
ENSLACG00000010373	-	70	35.088	ENSORLG00020002705	-	54	35.088	Oryzias_latipes_hni
ENSLACG00000010373	-	99	37.295	ENSORLG00015009803	-	52	37.295	Oryzias_latipes_hsok
ENSLACG00000010373	-	99	37.705	ENSORLG00015021822	-	65	37.705	Oryzias_latipes_hsok
ENSLACG00000010373	-	70	35.673	ENSOMEG00000007764	-	58	35.673	Oryzias_melastigma
ENSLACG00000010373	-	97	37.815	ENSPKIG00000019619	-	85	37.815	Paramormyrops_kingsleyae
ENSLACG00000010373	-	100	34.959	ENSPKIG00000007140	-	56	34.959	Paramormyrops_kingsleyae
ENSLACG00000010373	-	77	31.053	ENSPSIG00000001816	-	70	31.053	Pelodiscus_sinensis
ENSLACG00000010373	-	96	33.054	ENSPSIG00000001249	-	69	33.054	Pelodiscus_sinensis
ENSLACG00000010373	-	70	39.645	ENSPSIG00000002033	-	52	39.645	Pelodiscus_sinensis
ENSLACG00000010373	-	98	33.333	ENSPSIG00000001800	-	54	33.333	Pelodiscus_sinensis
ENSLACG00000010373	-	90	33.778	ENSPSIG00000014032	-	66	33.778	Pelodiscus_sinensis
ENSLACG00000010373	-	98	35.391	ENSPSIG00000001757	-	60	35.391	Pelodiscus_sinensis
ENSLACG00000010373	-	98	34.979	ENSPSIG00000000367	-	56	34.979	Pelodiscus_sinensis
ENSLACG00000010373	-	98	32.510	ENSPSIG00000001205	-	53	32.510	Pelodiscus_sinensis
ENSLACG00000010373	-	98	33.333	ENSPSIG00000001197	-	60	33.333	Pelodiscus_sinensis
ENSLACG00000010373	-	76	37.634	ENSPSIG00000001531	-	98	37.634	Pelodiscus_sinensis
ENSLACG00000010373	-	99	41.564	ENSPSIG00000000007	-	62	41.564	Pelodiscus_sinensis
ENSLACG00000010373	-	100	38.211	ENSPMEG00000018862	-	50	38.211	Poecilia_mexicana
ENSLACG00000010373	-	100	35.366	ENSPREG00000022349	-	53	35.366	Poecilia_reticulata
ENSLACG00000010373	-	99	36.626	ENSPNYG00000004598	-	82	36.626	Pundamilia_nyererei
ENSLACG00000010373	-	87	35.981	ENSPNAG00000001979	-	84	35.981	Pygocentrus_nattereri
ENSLACG00000010373	-	100	35.772	ENSPNAG00000015949	-	64	35.772	Pygocentrus_nattereri
ENSLACG00000010373	-	77	30.645	ENSSFOG00015015399	-	54	30.645	Scleropages_formosus
ENSLACG00000010373	-	77	37.968	ENSTRUG00000024970	-	61	37.968	Takifugu_rubripes
ENSLACG00000010373	-	90	34.146	ENSXMAG00000027711	-	74	34.146	Xiphophorus_maculatus