EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010386 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: zgc:109966
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 57294 bases
Position: chrJH126906.1:498962-556255
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011799	KH_1	PF00013.29	3.9e-55	1	3
ENSLACP00000011799	KH_1	PF00013.29	3.9e-55	2	3
ENSLACP00000011799	KH_1	PF00013.29	3.9e-55	3	3
ENSLACP00000011799	KH_2	PF07650.17	3.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011889	-	1422	-	ENSLACP00000011799	474 (aa)	-	H3AQ78

Gene Model

Click here to download ENSLACG00000010386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010386	pcbp3	78	62.803	ENSLACG00000015899	PCBP4	96	72.247
ENSLACG00000010386	pcbp3	79	79.521	ENSLACG00000010804	zgc:110045	99	68.134
ENSLACG00000010386	pcbp3	77	71.196	ENSLACG00000001442	PCBP2	99	64.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010386	pcbp3	78	77.778	ENSAPOG00000020003	pcbp3	90	77.778	Acanthochromis_polyacanthus
ENSLACG00000010386	pcbp3	77	81.267	ENSAPOG00000016582	-	97	81.267	Acanthochromis_polyacanthus
ENSLACG00000010386	pcbp3	75	83.060	ENSAMEG00000001697	-	97	83.060	Ailuropoda_melanoleuca
ENSLACG00000010386	pcbp3	74	82.571	ENSACIG00000002739	-	95	82.571	Amphilophus_citrinellus
ENSLACG00000010386	pcbp3	77	83.747	ENSACIG00000010933	pcbp3	97	83.747	Amphilophus_citrinellus
ENSLACG00000010386	pcbp3	72	79.027	ENSAOCG00000007806	-	97	79.027	Amphiprion_ocellaris
ENSLACG00000010386	pcbp3	73	83.046	ENSAOCG00000008592	-	95	83.046	Amphiprion_ocellaris
ENSLACG00000010386	pcbp3	74	82.286	ENSAPEG00000005209	-	95	82.286	Amphiprion_percula
ENSLACG00000010386	pcbp3	77	85.753	ENSAPEG00000008011	pcbp3	97	85.753	Amphiprion_percula
ENSLACG00000010386	pcbp3	73	87.069	ENSATEG00000015787	-	98	87.069	Anabas_testudineus
ENSLACG00000010386	pcbp3	74	81.714	ENSATEG00000009833	-	95	81.714	Anabas_testudineus
ENSLACG00000010386	pcbp3	75	82.385	ENSAPLG00000002975	-	97	82.385	Anas_platyrhynchos
ENSLACG00000010386	pcbp3	79	81.003	ENSAPLG00000008951	-	84	81.003	Anas_platyrhynchos
ENSLACG00000010386	pcbp3	75	87.467	ENSACAG00000004607	-	97	87.467	Anolis_carolinensis
ENSLACG00000010386	pcbp3	75	82.768	ENSACAG00000009819	-	96	82.768	Anolis_carolinensis
ENSLACG00000010386	pcbp3	72	82.313	ENSANAG00000030702	-	96	82.313	Aotus_nancymaae
ENSLACG00000010386	pcbp3	77	80.716	ENSACLG00000003801	-	95	83.429	Astatotilapia_calliptera
ENSLACG00000010386	pcbp3	77	85.753	ENSACLG00000011835	pcbp3	97	85.753	Astatotilapia_calliptera
ENSLACG00000010386	pcbp3	77	87.328	ENSAMXG00000003440	pcbp3	97	87.328	Astyanax_mexicanus
ENSLACG00000010386	pcbp3	73	79.885	ENSAMXG00000013588	-	97	79.885	Astyanax_mexicanus
ENSLACG00000010386	pcbp3	99	54.947	ENSAMXG00000001760	zgc:110045	99	54.947	Astyanax_mexicanus
ENSLACG00000010386	pcbp3	72	82.143	ENSCAFG00020019472	-	78	92.342	Canis_lupus_dingo
ENSLACG00000010386	pcbp3	75	85.070	ENSCSAG00000007440	-	88	85.070	Chlorocebus_sabaeus
ENSLACG00000010386	pcbp3	80	81.365	ENSCPBG00000012151	-	99	81.365	Chrysemys_picta_bellii
ENSLACG00000010386	pcbp3	79	89.302	ENSCPBG00000000733	-	99	89.302	Chrysemys_picta_bellii
ENSLACG00000010386	pcbp3	74	79.437	ENSCSEG00000000822	pcbp3	90	94.037	Cynoglossus_semilaevis
ENSLACG00000010386	pcbp3	52	95.187	ENSCSEG00000016984	-	75	95.187	Cynoglossus_semilaevis
ENSLACG00000010386	pcbp3	77	80.926	ENSCVAG00000005262	-	96	83.616	Cyprinodon_variegatus
ENSLACG00000010386	pcbp3	77	85.479	ENSCVAG00000014482	pcbp3	97	85.479	Cyprinodon_variegatus
ENSLACG00000010386	pcbp3	69	96.644	ENSDARG00000054378	pcbp3	96	90.395	Danio_rerio
ENSLACG00000010386	pcbp3	75	72.676	ENSETEG00000015988	-	97	72.676	Echinops_telfairi
ENSLACG00000010386	pcbp3	72	63.376	ENSEBUG00000016192	pcbp3	99	63.376	Eptatretus_burgeri
ENSLACG00000010386	pcbp3	61	59.589	ENSEBUG00000005495	pcbp3	73	59.589	Eptatretus_burgeri
ENSLACG00000010386	pcbp3	76	70.994	ENSEBUG00000007485	-	86	78.070	Eptatretus_burgeri
ENSLACG00000010386	pcbp3	76	81.215	ENSELUG00000001560	-	94	79.178	Esox_lucius
ENSLACG00000010386	pcbp3	76	86.501	ENSELUG00000003521	pcbp3	96	86.501	Esox_lucius
ENSLACG00000010386	pcbp3	79	81.003	ENSFALG00000004411	-	99	69.167	Ficedula_albicollis
ENSLACG00000010386	pcbp3	75	85.352	ENSFALG00000003949	-	97	85.352	Ficedula_albicollis
ENSLACG00000010386	pcbp3	74	80.057	ENSFHEG00000016615	pcbp3	93	80.057	Fundulus_heteroclitus
ENSLACG00000010386	pcbp3	74	81.638	ENSFHEG00000006539	-	96	81.638	Fundulus_heteroclitus
ENSLACG00000010386	pcbp3	73	61.622	ENSGMOG00000008611	-	98	61.622	Gadus_morhua
ENSLACG00000010386	pcbp3	74	70.321	ENSGMOG00000011992	pcbp3	95	70.321	Gadus_morhua
ENSLACG00000010386	pcbp3	76	83.008	ENSGALG00000013155	-	98	81.429	Gallus_gallus
ENSLACG00000010386	pcbp3	75	85.067	ENSGALG00000004394	-	97	85.067	Gallus_gallus
ENSLACG00000010386	pcbp3	73	85.345	ENSGAFG00000011430	pcbp3	93	85.345	Gambusia_affinis
ENSLACG00000010386	pcbp3	77	80.992	ENSGAFG00000010274	-	97	80.992	Gambusia_affinis
ENSLACG00000010386	pcbp3	76	75.000	ENSGACG00000014955	-	98	75.000	Gasterosteus_aculeatus
ENSLACG00000010386	pcbp3	74	78.226	ENSGACG00000002266	-	95	78.226	Gasterosteus_aculeatus
ENSLACG00000010386	pcbp3	58	91.284	ENSGAGG00000006956	-	88	91.284	Gopherus_agassizii
ENSLACG00000010386	pcbp3	76	76.632	ENSGAGG00000000271	-	100	77.955	Gopherus_agassizii
ENSLACG00000010386	pcbp3	77	85.205	ENSHBUG00000010697	pcbp3	97	85.205	Haplochromis_burtoni
ENSLACG00000010386	pcbp3	77	80.716	ENSHBUG00000021782	-	95	83.429	Haplochromis_burtoni
ENSLACG00000010386	pcbp3	77	85.714	ENSHCOG00000017868	pcbp3	97	85.714	Hippocampus_comes
ENSLACG00000010386	pcbp3	74	79.429	ENSHCOG00000006067	-	95	79.429	Hippocampus_comes
ENSLACG00000010386	pcbp3	74	90.395	ENSIPUG00000006238	pcbp3	96	90.395	Ictalurus_punctatus
ENSLACG00000010386	pcbp3	77	85.753	ENSKMAG00000003046	pcbp3	97	85.753	Kryptolebias_marmoratus
ENSLACG00000010386	pcbp3	77	80.441	ENSKMAG00000018530	-	97	80.441	Kryptolebias_marmoratus
ENSLACG00000010386	pcbp3	74	80.286	ENSLBEG00000006201	pcbp3	93	80.286	Labrus_bergylta
ENSLACG00000010386	pcbp3	77	64.033	ENSLBEG00000006542	-	94	71.714	Labrus_bergylta
ENSLACG00000010386	pcbp3	79	79.787	ENSLOCG00000005058	zgc:110045	99	68.553	Lepisosteus_oculatus
ENSLACG00000010386	pcbp3	75	91.268	ENSLOCG00000009369	pcbp3	97	91.268	Lepisosteus_oculatus
ENSLACG00000010386	pcbp3	74	81.143	ENSMAMG00000011620	-	95	81.143	Mastacembelus_armatus
ENSLACG00000010386	pcbp3	73	80.460	ENSMAMG00000022336	pcbp3	90	80.460	Mastacembelus_armatus
ENSLACG00000010386	pcbp3	74	79.772	ENSMZEG00005014882	-	93	79.772	Maylandia_zebra
ENSLACG00000010386	pcbp3	77	84.022	ENSMZEG00005008993	pcbp3	98	84.746	Maylandia_zebra
ENSLACG00000010386	pcbp3	79	81.217	ENSMGAG00000006794	-	99	69.311	Meleagris_gallopavo
ENSLACG00000010386	pcbp3	76	76.190	ENSMGAG00000001883	-	98	76.190	Meleagris_gallopavo
ENSLACG00000010386	pcbp3	74	81.143	ENSMMOG00000005216	-	95	81.143	Mola_mola
ENSLACG00000010386	pcbp3	73	79.714	ENSMMOG00000000730	pcbp3	85	79.714	Mola_mola
ENSLACG00000010386	pcbp3	58	80.252	ENSMODG00000027884	-	94	80.252	Monodelphis_domestica
ENSLACG00000010386	pcbp3	73	86.819	ENSMALG00000000691	pcbp3	93	86.819	Monopterus_albus
ENSLACG00000010386	pcbp3	75	74.667	ENSMPUG00000001779	-	89	74.667	Mustela_putorius_furo
ENSLACG00000010386	pcbp3	77	83.471	ENSNBRG00000016409	-	97	83.471	Neolamprologus_brichardi
ENSLACG00000010386	pcbp3	73	83.051	ENSNBRG00000016714	-	93	83.051	Neolamprologus_brichardi
ENSLACG00000010386	pcbp3	74	84.182	ENSOPRG00000003431	-	100	84.182	Ochotona_princeps
ENSLACG00000010386	pcbp3	73	83.967	ENSONIG00000012122	-	95	83.967	Oreochromis_niloticus
ENSLACG00000010386	pcbp3	74	83.429	ENSONIG00000004611	-	95	83.429	Oreochromis_niloticus
ENSLACG00000010386	pcbp3	75	84.507	ENSOCUG00000002696	-	88	84.507	Oryctolagus_cuniculus
ENSLACG00000010386	pcbp3	78	81.351	ENSORLG00000022739	-	97	83.754	Oryzias_latipes
ENSLACG00000010386	pcbp3	73	83.046	ENSORLG00000000059	pcbp3	97	83.046	Oryzias_latipes
ENSLACG00000010386	pcbp3	78	81.081	ENSORLG00020006124	-	97	83.473	Oryzias_latipes_hni
ENSLACG00000010386	pcbp3	73	83.046	ENSORLG00020012671	pcbp3	95	83.046	Oryzias_latipes_hni
ENSLACG00000010386	pcbp3	73	83.046	ENSORLG00015000429	pcbp3	95	83.046	Oryzias_latipes_hsok
ENSLACG00000010386	pcbp3	78	81.351	ENSORLG00015008051	-	99	81.351	Oryzias_latipes_hsok
ENSLACG00000010386	pcbp3	72	81.424	ENSOMEG00000020811	pcbp3	96	81.424	Oryzias_melastigma
ENSLACG00000010386	pcbp3	75	83.473	ENSOMEG00000020162	-	97	83.473	Oryzias_melastigma
ENSLACG00000010386	pcbp3	75	80.052	ENSOGAG00000008044	-	97	80.052	Otolemur_garnettii
ENSLACG00000010386	pcbp3	77	81.543	ENSPKIG00000019329	pcbp3	97	81.543	Paramormyrops_kingsleyae
ENSLACG00000010386	pcbp3	59	79.535	ENSPKIG00000020913	-	93	79.535	Paramormyrops_kingsleyae
ENSLACG00000010386	pcbp3	76	76.632	ENSPSIG00000008350	-	99	63.660	Pelodiscus_sinensis
ENSLACG00000010386	pcbp3	75	73.656	ENSPSIG00000014970	-	97	74.194	Pelodiscus_sinensis
ENSLACG00000010386	pcbp3	73	89.368	ENSPMGG00000022383	pcbp3	93	89.368	Periophthalmus_magnuspinnatus
ENSLACG00000010386	pcbp3	54	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSLACG00000010386	pcbp3	75	64.641	ENSPMAG00000004551	pcbp3	90	64.641	Petromyzon_marinus
ENSLACG00000010386	pcbp3	75	92.113	ENSPCIG00000028092	-	97	92.113	Phascolarctos_cinereus
ENSLACG00000010386	pcbp3	74	78.512	ENSPLAG00000004074	-	89	78.512	Poecilia_latipinna
ENSLACG00000010386	pcbp3	73	80.707	ENSPLAG00000011449	pcbp3	86	80.707	Poecilia_latipinna
ENSLACG00000010386	pcbp3	74	81.197	ENSPMEG00000006653	-	94	94.737	Poecilia_mexicana
ENSLACG00000010386	pcbp3	73	88.352	ENSPMEG00000021239	pcbp3	93	88.352	Poecilia_mexicana
ENSLACG00000010386	pcbp3	74	81.714	ENSPREG00000020585	-	91	87.556	Poecilia_reticulata
ENSLACG00000010386	pcbp3	73	78.857	ENSPREG00000015736	pcbp3	97	78.857	Poecilia_reticulata
ENSLACG00000010386	pcbp3	74	81.143	ENSPNYG00000013205	-	95	81.143	Pundamilia_nyererei
ENSLACG00000010386	pcbp3	76	78.771	ENSPNYG00000012326	pcbp3	96	78.771	Pundamilia_nyererei
ENSLACG00000010386	pcbp3	74	88.068	ENSPNAG00000008541	-	94	88.068	Pygocentrus_nattereri
ENSLACG00000010386	pcbp3	74	83.898	ENSPNAG00000015104	pcbp3	96	83.898	Pygocentrus_nattereri
ENSLACG00000010386	pcbp3	75	85.070	ENSRNOG00000001245	Pcbp3	97	85.070	Rattus_norvegicus
ENSLACG00000010386	pcbp3	75	77.003	ENSRBIG00000028177	-	97	77.003	Rhinopithecus_bieti
ENSLACG00000010386	pcbp3	75	81.481	ENSSHAG00000007890	-	97	80.800	Sarcophilus_harrisii
ENSLACG00000010386	pcbp3	73	88.506	ENSSFOG00015010205	pcbp3	98	88.506	Scleropages_formosus
ENSLACG00000010386	pcbp3	74	74.148	ENSSFOG00015007118	-	94	74.148	Scleropages_formosus
ENSLACG00000010386	pcbp3	74	88.319	ENSSFOG00015014706	pcbp3	94	88.319	Scleropages_formosus
ENSLACG00000010386	pcbp3	77	80.992	ENSSMAG00000003135	-	95	83.714	Scophthalmus_maximus
ENSLACG00000010386	pcbp3	73	80.747	ENSSMAG00000011929	pcbp3	95	80.747	Scophthalmus_maximus
ENSLACG00000010386	pcbp3	74	81.766	ENSSDUG00000008502	-	93	81.766	Seriola_dumerili
ENSLACG00000010386	pcbp3	73	86.286	ENSSDUG00000011608	pcbp3	96	86.286	Seriola_dumerili
ENSLACG00000010386	pcbp3	77	81.267	ENSSLDG00000020161	-	97	81.267	Seriola_lalandi_dorsalis
ENSLACG00000010386	pcbp3	73	86.286	ENSSLDG00000008518	pcbp3	96	86.286	Seriola_lalandi_dorsalis
ENSLACG00000010386	pcbp3	79	78.457	ENSSPUG00000013214	-	94	82.028	Sphenodon_punctatus
ENSLACG00000010386	pcbp3	72	79.027	ENSSPAG00000004190	-	97	79.027	Stegastes_partitus
ENSLACG00000010386	pcbp3	74	75.783	ENSSPAG00000023341	-	93	75.783	Stegastes_partitus
ENSLACG00000010386	pcbp3	75	78.133	ENSTGUG00000003316	-	97	78.133	Taeniopygia_guttata
ENSLACG00000010386	pcbp3	75	79.379	ENSTGUG00000008158	-	97	79.379	Taeniopygia_guttata
ENSLACG00000010386	pcbp3	72	82.407	ENSTRUG00000006280	-	89	82.407	Takifugu_rubripes
ENSLACG00000010386	pcbp3	77	80.441	ENSTRUG00000013604	pcbp3	96	89.908	Takifugu_rubripes
ENSLACG00000010386	pcbp3	75	84.533	ENSTTRG00000015075	-	97	84.533	Tursiops_truncatus
ENSLACG00000010386	pcbp3	77	80.278	ENSXETG00000010491	pcbp2	100	69.197	Xenopus_tropicalis
ENSLACG00000010386	pcbp3	75	78.933	ENSXETG00000011483	pcbp1	97	78.933	Xenopus_tropicalis
ENSLACG00000010386	pcbp3	73	88.352	ENSXCOG00000020481	pcbp3	93	88.352	Xiphophorus_couchianus
ENSLACG00000010386	pcbp3	77	81.267	ENSXMAG00000028711	-	97	81.267	Xiphophorus_maculatus
ENSLACG00000010386	pcbp3	77	85.753	ENSXMAG00000008175	pcbp3	97	85.753	Xiphophorus_maculatus