EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010429 (Gene tree)
Gene ID: 102350469
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 47627 bases
Position: chrJH127490.1:502477-550103
Accession: 102350469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011850	DUF382	PF04037.13	5.2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011940	SF3B2-201	3126	XM_006003463	ENSLACP00000011850	892 (aa)	-	H3AQC9

Gene Model

Click here to download ENSLACG00000010429's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010429	SF3B2	93	74.679	ENSG00000087365	SF3B2	99	93.651	Homo_sapiens
ENSLACG00000010429	SF3B2	97	65.338	ENSAPOG00000001974	sf3b2	78	79.935	Acanthochromis_polyacanthus
ENSLACG00000010429	SF3B2	86	74.903	ENSAMEG00000017206	SF3B2	71	81.064	Ailuropoda_melanoleuca
ENSLACG00000010429	SF3B2	100	66.630	ENSAOCG00000009207	sf3b2	82	80.312	Amphiprion_ocellaris
ENSLACG00000010429	SF3B2	100	66.161	ENSAPEG00000002762	sf3b2	80	80.438	Amphiprion_percula
ENSLACG00000010429	SF3B2	98	60.750	ENSACAG00000008615	SF3B2	79	75.000	Anolis_carolinensis
ENSLACG00000010429	SF3B2	93	74.936	ENSANAG00000029120	SF3B2	82	81.250	Aotus_nancymaae
ENSLACG00000010429	SF3B2	100	65.604	ENSACLG00000014771	sf3b2	84	80.251	Astatotilapia_calliptera
ENSLACG00000010429	SF3B2	85	70.947	ENSAMXG00000007929	sf3b2	86	78.774	Astyanax_mexicanus
ENSLACG00000010429	SF3B2	86	74.131	ENSBTAG00000002778	SF3B2	71	80.564	Bos_taurus
ENSLACG00000010429	SF3B2	62	48.691	WBGene00021004	sftb-2	92	48.947	Caenorhabditis_elegans
ENSLACG00000010429	SF3B2	93	74.936	ENSCJAG00000001656	SF3B2	79	81.250	Callithrix_jacchus
ENSLACG00000010429	SF3B2	86	75.130	ENSCAFG00000013033	SF3B2	71	81.348	Canis_familiaris
ENSLACG00000010429	SF3B2	86	75.130	ENSCAFG00020015382	SF3B2	71	81.348	Canis_lupus_dingo
ENSLACG00000010429	SF3B2	86	74.131	ENSCHIG00000011211	SF3B2	71	80.564	Capra_hircus
ENSLACG00000010429	SF3B2	98	72.472	ENSTSYG00000000959	SF3B2	79	81.250	Carlito_syrichta
ENSLACG00000010429	SF3B2	89	69.963	ENSCPOG00000008294	SF3B2	80	78.957	Cavia_porcellus
ENSLACG00000010429	SF3B2	93	74.936	ENSCCAG00000035256	SF3B2	79	81.250	Cebus_capucinus
ENSLACG00000010429	SF3B2	93	74.679	ENSCATG00000042240	SF3B2	79	81.250	Cercocebus_atys
ENSLACG00000010429	SF3B2	98	72.278	ENSCLAG00000016852	SF3B2	79	81.034	Chinchilla_lanigera
ENSLACG00000010429	SF3B2	86	75.194	ENSCSAG00000008121	SF3B2	71	81.250	Chlorocebus_sabaeus
ENSLACG00000010429	SF3B2	71	93.299	ENSCHOG00000001476	SF3B2	70	86.082	Choloepus_hoffmanni
ENSLACG00000010429	SF3B2	71	83.648	ENSCPBG00000022465	SF3B2	87	83.491	Chrysemys_picta_bellii
ENSLACG00000010429	SF3B2	72	60.276	ENSCING00000005665	-	87	65.288	Ciona_intestinalis
ENSLACG00000010429	SF3B2	70	61.076	ENSCSAVG00000002029	-	86	66.000	Ciona_savignyi
ENSLACG00000010429	SF3B2	93	75.357	ENSCANG00000039680	SF3B2	79	81.250	Colobus_angolensis_palliatus
ENSLACG00000010429	SF3B2	93	75.353	ENSCGRG00001015741	Sf3b2	79	81.191	Cricetulus_griseus_chok1gshd
ENSLACG00000010429	SF3B2	93	75.353	ENSCGRG00000018110	Sf3b2	79	81.191	Cricetulus_griseus_crigri
ENSLACG00000010429	SF3B2	74	74.516	ENSCSEG00000000230	sf3b2	78	79.338	Cynoglossus_semilaevis
ENSLACG00000010429	SF3B2	74	78.024	ENSDARG00000018049	sf3b2	76	80.093	Danio_rerio
ENSLACG00000010429	SF3B2	98	73.903	ENSDNOG00000009484	SF3B2	78	81.034	Dasypus_novemcinctus
ENSLACG00000010429	SF3B2	93	73.852	ENSDORG00000002495	Sf3b2	80	81.191	Dipodomys_ordii
ENSLACG00000010429	SF3B2	64	83.796	ENSETEG00000020284	SF3B2	57	83.607	Echinops_telfairi
ENSLACG00000010429	SF3B2	82	66.574	ENSEBUG00000013703	sf3b2	67	78.198	Eptatretus_burgeri
ENSLACG00000010429	SF3B2	86	75.291	ENSEASG00005004508	SF3B2	71	81.562	Equus_asinus_asinus
ENSLACG00000010429	SF3B2	86	75.291	ENSECAG00000024461	SF3B2	71	81.562	Equus_caballus
ENSLACG00000010429	SF3B2	50	91.525	ENSEEUG00000014278	-	50	91.525	Erinaceus_europaeus
ENSLACG00000010429	SF3B2	100	65.880	ENSELUG00000005586	sf3b2	79	79.658	Esox_lucius
ENSLACG00000010429	SF3B2	93	74.485	ENSFCAG00000013289	SF3B2	79	81.191	Felis_catus
ENSLACG00000010429	SF3B2	74	69.173	ENSFALG00000014653	SF3B2	91	69.029	Ficedula_albicollis
ENSLACG00000010429	SF3B2	79	81.202	ENSFDAG00000019806	SF3B2	79	80.465	Fukomys_damarensis
ENSLACG00000010429	SF3B2	72	79.756	ENSGMOG00000012131	sf3b2	96	78.873	Gadus_morhua
ENSLACG00000010429	SF3B2	100	66.995	ENSGAFG00000001675	sf3b2	75	78.328	Gambusia_affinis
ENSLACG00000010429	SF3B2	72	78.746	ENSGACG00000019012	sf3b2	96	79.370	Gasterosteus_aculeatus
ENSLACG00000010429	SF3B2	99	73.081	ENSGAGG00000023916	SF3B2	94	83.622	Gopherus_agassizii
ENSLACG00000010429	SF3B2	77	93.484	ENSGGOG00000028448	SF3B2	68	93.484	Gorilla_gorilla
ENSLACG00000010429	SF3B2	100	65.934	ENSHBUG00000017349	sf3b2	84	80.408	Haplochromis_burtoni
ENSLACG00000010429	SF3B2	98	72.391	ENSHGLG00000010807	SF3B2	79	81.034	Heterocephalus_glaber_female
ENSLACG00000010429	SF3B2	98	72.830	ENSHGLG00100006361	SF3B2	79	81.034	Heterocephalus_glaber_male
ENSLACG00000010429	SF3B2	100	64.648	ENSHCOG00000016203	sf3b2	83	79.747	Hippocampus_comes
ENSLACG00000010429	SF3B2	83	77.599	ENSIPUG00000009383	sf3b2	82	77.623	Ictalurus_punctatus
ENSLACG00000010429	SF3B2	98	73.536	ENSSTOG00000028892	SF3B2	79	81.348	Ictidomys_tridecemlineatus
ENSLACG00000010429	SF3B2	81	81.442	ENSJJAG00000018193	Sf3b2	79	80.465	Jaculus_jaculus
ENSLACG00000010429	SF3B2	92	89.159	ENSKMAG00000020181	sf3b2	85	78.082	Kryptolebias_marmoratus
ENSLACG00000010429	SF3B2	100	67.618	ENSLBEG00000027739	sf3b2	89	79.370	Labrus_bergylta
ENSLACG00000010429	SF3B2	98	72.197	ENSLAFG00000002128	SF3B2	80	82.031	Loxodonta_africana
ENSLACG00000010429	SF3B2	93	74.583	ENSMFAG00000003064	SF3B2	80	81.123	Macaca_fascicularis
ENSLACG00000010429	SF3B2	95	70.361	ENSMMUG00000011743	SF3B2	82	75.938	Macaca_mulatta
ENSLACG00000010429	SF3B2	93	74.202	ENSMNEG00000034437	SF3B2	79	81.250	Macaca_nemestrina
ENSLACG00000010429	SF3B2	93	74.202	ENSMLEG00000029373	SF3B2	79	81.395	Mandrillus_leucophaeus
ENSLACG00000010429	SF3B2	92	70.656	ENSMAMG00000014103	sf3b2	82	79.257	Mastacembelus_armatus
ENSLACG00000010429	SF3B2	100	65.604	ENSMZEG00005020789	sf3b2	83	80.251	Maylandia_zebra
ENSLACG00000010429	SF3B2	98	71.623	ENSMICG00000016942	-	82	81.162	Microcebus_murinus
ENSLACG00000010429	SF3B2	98	70.688	ENSMICG00000008565	-	72	81.191	Microcebus_murinus
ENSLACG00000010429	SF3B2	93	75.096	ENSMOCG00000003136	Sf3b2	79	81.034	Microtus_ochrogaster
ENSLACG00000010429	SF3B2	71	76.398	ENSMODG00000025020	-	99	75.389	Monodelphis_domestica
ENSLACG00000010429	SF3B2	86	69.987	ENSMALG00000015137	sf3b2	75	78.173	Monopterus_albus
ENSLACG00000010429	SF3B2	98	72.328	MGP_CAROLIEiJ_G0022539	Sf3b2	79	81.034	Mus_caroli
ENSLACG00000010429	SF3B2	93	74.392	ENSMUSG00000024853	Sf3b2	79	81.034	Mus_musculus
ENSLACG00000010429	SF3B2	93	75.161	MGP_PahariEiJ_G0014036	Sf3b2	79	80.878	Mus_pahari
ENSLACG00000010429	SF3B2	93	74.264	MGP_SPRETEiJ_G0023453	Sf3b2	79	81.034	Mus_spretus
ENSLACG00000010429	SF3B2	86	75.130	ENSMPUG00000011349	SF3B2	71	81.348	Mustela_putorius_furo
ENSLACG00000010429	SF3B2	93	75.065	ENSNGAG00000012103	Sf3b2	80	81.034	Nannospalax_galili
ENSLACG00000010429	SF3B2	93	72.577	ENSNLEG00000006007	SF3B2	80	77.523	Nomascus_leucogenys
ENSLACG00000010429	SF3B2	77	87.784	ENSMEUG00000000019	SF3B2	67	87.784	Notamacropus_eugenii
ENSLACG00000010429	SF3B2	100	68.147	ENSODEG00000017764	SF3B2	82	76.279	Octodon_degus
ENSLACG00000010429	SF3B2	100	65.096	ENSONIG00000013068	sf3b2	84	79.167	Oreochromis_niloticus
ENSLACG00000010429	SF3B2	72	75.538	ENSOANG00000012482	SF3B2	65	85.010	Ornithorhynchus_anatinus
ENSLACG00000010429	SF3B2	100	66.776	ENSORLG00000008235	sf3b2	81	80.908	Oryzias_latipes
ENSLACG00000010429	SF3B2	100	66.667	ENSORLG00020005357	sf3b2	84	80.908	Oryzias_latipes_hni
ENSLACG00000010429	SF3B2	100	66.667	ENSORLG00015022454	sf3b2	82	79.528	Oryzias_latipes_hsok
ENSLACG00000010429	SF3B2	100	65.050	ENSOMEG00000017480	sf3b2	84	79.874	Oryzias_melastigma
ENSLACG00000010429	SF3B2	61	89.071	ENSOGAG00000005799	SF3B2	59	91.011	Otolemur_garnettii
ENSLACG00000010429	SF3B2	98	69.967	ENSOARG00000002125	SF3B2	86	80.564	Ovis_aries
ENSLACG00000010429	SF3B2	93	74.392	ENSPPAG00000007359	SF3B2	79	81.250	Pan_paniscus
ENSLACG00000010429	SF3B2	93	74.485	ENSPPRG00000013334	SF3B2	79	81.191	Panthera_pardus
ENSLACG00000010429	SF3B2	93	74.485	ENSPTIG00000015022	SF3B2	79	81.191	Panthera_tigris_altaica
ENSLACG00000010429	SF3B2	93	74.392	ENSPTRG00000003912	SF3B2	79	81.250	Pan_troglodytes
ENSLACG00000010429	SF3B2	93	74.679	ENSPANG00000008593	SF3B2	79	81.250	Papio_anubis
ENSLACG00000010429	SF3B2	100	68.565	ENSPKIG00000016576	sf3b2	87	79.348	Paramormyrops_kingsleyae
ENSLACG00000010429	SF3B2	83	83.937	ENSPSIG00000003158	SF3B2	83	84.094	Pelodiscus_sinensis
ENSLACG00000010429	SF3B2	77	75.705	ENSPMGG00000000819	sf3b2	81	75.705	Periophthalmus_magnuspinnatus
ENSLACG00000010429	SF3B2	93	66.071	ENSPEMG00000015451	-	79	74.646	Peromyscus_maniculatus_bairdii
ENSLACG00000010429	SF3B2	93	74.807	ENSPEMG00000015437	Sf3b2	79	81.191	Peromyscus_maniculatus_bairdii
ENSLACG00000010429	SF3B2	71	83.075	ENSPCIG00000008381	SF3B2	75	81.804	Phascolarctos_cinereus
ENSLACG00000010429	SF3B2	100	65.584	ENSPFOG00000002552	sf3b2	81	76.693	Poecilia_formosa
ENSLACG00000010429	SF3B2	60	88.931	ENSPLAG00000001471	sf3b2	75	78.947	Poecilia_latipinna
ENSLACG00000010429	SF3B2	100	65.830	ENSPMEG00000013180	sf3b2	75	79.070	Poecilia_mexicana
ENSLACG00000010429	SF3B2	67	88.931	ENSPREG00000002665	sf3b2	85	79.134	Poecilia_reticulata
ENSLACG00000010429	SF3B2	59	67.472	ENSPPYG00000003034	-	59	74.257	Pongo_abelii
ENSLACG00000010429	SF3B2	98	72.635	ENSPCAG00000005129	SF3B2	71	81.250	Procavia_capensis
ENSLACG00000010429	SF3B2	98	73.055	ENSPCOG00000025375	SF3B2	79	81.250	Propithecus_coquereli
ENSLACG00000010429	SF3B2	52	93.458	ENSPVAG00000016975	-	52	93.458	Pteropus_vampyrus
ENSLACG00000010429	SF3B2	55	94.298	ENSPVAG00000005466	-	61	94.298	Pteropus_vampyrus
ENSLACG00000010429	SF3B2	80	77.745	ENSPNYG00000023594	sf3b2	93	79.407	Pundamilia_nyererei
ENSLACG00000010429	SF3B2	100	67.689	ENSPNAG00000001891	sf3b2	72	80.560	Pygocentrus_nattereri
ENSLACG00000010429	SF3B2	93	74.550	ENSRNOG00000020412	Sf3b2	79	80.878	Rattus_norvegicus
ENSLACG00000010429	SF3B2	93	74.613	ENSRBIG00000034065	SF3B2	79	81.395	Rhinopithecus_bieti
ENSLACG00000010429	SF3B2	93	74.613	ENSRROG00000034496	SF3B2	79	81.395	Rhinopithecus_roxellana
ENSLACG00000010429	SF3B2	98	72.027	ENSSBOG00000026337	SF3B2	79	81.406	Saimiri_boliviensis_boliviensis
ENSLACG00000010429	SF3B2	72	65.954	ENSSHAG00000018043	-	77	66.822	Sarcophilus_harrisii
ENSLACG00000010429	SF3B2	98	68.593	ENSSHAG00000010933	-	87	78.227	Sarcophilus_harrisii
ENSLACG00000010429	SF3B2	100	68.467	ENSSFOG00015021125	sf3b2	71	80.595	Scleropages_formosus
ENSLACG00000010429	SF3B2	94	88.302	ENSSMAG00000004079	sf3b2	80	77.914	Scophthalmus_maximus
ENSLACG00000010429	SF3B2	66	88.491	ENSSLDG00000006838	sf3b2	84	79.020	Seriola_lalandi_dorsalis
ENSLACG00000010429	SF3B2	88	85.039	ENSSPUG00000009198	SF3B2	82	82.656	Sphenodon_punctatus
ENSLACG00000010429	SF3B2	100	65.433	ENSSPAG00000004406	sf3b2	83	78.097	Stegastes_partitus
ENSLACG00000010429	SF3B2	100	54.723	ENSTRUG00000007611	sf3b2	89	72.344	Takifugu_rubripes
ENSLACG00000010429	SF3B2	98	62.570	ENSTNIG00000007441	sf3b2	82	76.535	Tetraodon_nigroviridis
ENSLACG00000010429	SF3B2	79	73.832	ENSTBEG00000004258	SF3B2	71	92.857	Tupaia_belangeri
ENSLACG00000010429	SF3B2	86	75.130	ENSTTRG00000014339	SF3B2	71	81.875	Tursiops_truncatus
ENSLACG00000010429	SF3B2	83	74.633	ENSUAMG00000020754	SF3B2	67	80.820	Ursus_americanus
ENSLACG00000010429	SF3B2	86	75.000	ENSUMAG00000010994	SF3B2	71	81.191	Ursus_maritimus
ENSLACG00000010429	SF3B2	86	75.000	ENSVVUG00000027029	SF3B2	71	81.505	Vulpes_vulpes
ENSLACG00000010429	SF3B2	73	78.221	ENSXETG00000008422	sf3b2	81	77.237	Xenopus_tropicalis
ENSLACG00000010429	SF3B2	72	77.294	ENSXCOG00000008943	sf3b2	84	78.268	Xiphophorus_couchianus
ENSLACG00000010429	SF3B2	60	88.180	ENSXMAG00000008467	sf3b2	75	77.692	Xiphophorus_maculatus