EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010461 (Gene tree)
Gene ID: 102352790
Gene Symbol: RAB12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 46510 bases
Position: chrJH127943.1:505233-551742
Accession: 102352790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011884	MMR_HSR1	PF01926.23	6.9e-07	1	1
ENSLACP00000011885	MMR_HSR1	PF01926.23	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000011975	RAB12-201	3034	XM_006006662	ENSLACP00000011884	249 (aa)	XP_006006724	H3AQG3
ENSLACT00000011976	RAB12-202	813	-	ENSLACP00000011885	270 (aa)	-	H3AQG4

Gene Model

Click here to download ENSLACG00000010461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010461	RAB12	63	37.975	ENSLACG00000016518	-	50	37.975
ENSLACG00000010461	RAB12	66	38.462	ENSLACG00000008809	zgc:100918	82	38.462
ENSLACG00000010461	RAB12	79	32.500	ENSLACG00000012674	si:dkey-34d22.5	95	32.500
ENSLACG00000010461	RAB12	66	34.756	ENSLACG00000003722	rabl2	71	34.756
ENSLACG00000010461	RAB12	64	37.107	ENSLACG00000007092	RAB22A	81	37.107
ENSLACG00000010461	RAB12	62	38.462	ENSLACG00000004025	RAB23	69	38.095
ENSLACG00000010461	RAB12	68	49.704	ENSLACG00000012869	RAB1A	92	46.032
ENSLACG00000010461	RAB12	76	35.567	ENSLACG00000002523	RAB29	90	35.567
ENSLACG00000010461	RAB12	84	34.685	ENSLACG00000011557	zgc:101559	87	36.816
ENSLACG00000010461	RAB12	65	49.390	ENSLACG00000009310	rab18a	89	46.774
ENSLACG00000010461	RAB12	84	36.916	ENSLACG00000011181	RAB14	98	36.916
ENSLACG00000010461	RAB12	59	33.108	ENSLACG00000014985	RAP2B	87	34.161
ENSLACG00000010461	RAB12	67	31.737	ENSLACG00000012088	rheb	89	31.737
ENSLACG00000010461	RAB12	65	30.723	ENSLACG00000003581	rasd3	77	30.723
ENSLACG00000010461	RAB12	64	37.349	ENSLACG00000001081	RAB34	66	36.000
ENSLACG00000010461	RAB12	65	37.126	ENSLACG00000017891	RAB9B	78	37.126
ENSLACG00000010461	RAB12	68	40.698	ENSLACG00000011157	RAB25	96	36.538
ENSLACG00000010461	RAB12	62	32.484	ENSLACG00000010042	-	80	32.738
ENSLACG00000010461	RAB12	81	36.765	ENSLACG00000013980	rab41	93	36.765
ENSLACG00000010461	RAB12	82	36.538	ENSLACG00000012755	-	97	37.019
ENSLACG00000010461	RAB12	69	49.419	ENSLACG00000012717	RAB1B	84	49.419
ENSLACG00000010461	RAB12	75	44.920	ENSLACG00000006407	RAB30	90	44.920
ENSLACG00000010461	RAB12	82	38.679	ENSLACG00000016857	-	95	38.679
ENSLACG00000010461	RAB12	82	38.679	ENSLACG00000012184	RAB11A	95	38.835
ENSLACG00000010461	RAB12	54	32.090	ENSLACG00000011001	RAB20	55	32.090
ENSLACG00000010461	RAB12	66	43.373	ENSLACG00000002332	-	77	43.373
ENSLACG00000010461	RAB12	66	43.373	ENSLACG00000016074	RAB39B	77	43.373
ENSLACG00000010461	RAB12	71	35.751	ENSLACG00000015770	RAB7A	93	35.751
ENSLACG00000010461	RAB12	60	31.788	ENSLACG00000017464	KRAS	85	32.099
ENSLACG00000010461	RAB12	69	47.674	ENSLACG00000008103	-	97	47.399
ENSLACG00000010461	RAB12	59	32.432	ENSLACG00000017138	RRAS	91	32.919
ENSLACG00000010461	RAB12	50	30.952	ENSLACG00000003905	ARL4D	63	30.952
ENSLACG00000010461	RAB12	63	44.937	ENSLACG00000016974	RAB11B	91	44.937
ENSLACG00000010461	RAB12	69	36.158	ENSLACG00000017799	RAB36	66	36.158
ENSLACG00000010461	RAB12	63	45.860	ENSLACG00000014446	RAB2B	95	45.860
ENSLACG00000010461	RAB12	63	31.447	ENSLACG00000016958	-	76	31.447
ENSLACG00000010461	RAB12	59	34.459	ENSLACG00000013122	RRAS2	79	34.783
ENSLACG00000010461	RAB12	70	36.782	ENSLACG00000004663	RAB5A	80	36.782
ENSLACG00000010461	RAB12	65	45.732	ENSLACG00000011256	rab18b	79	45.732
ENSLACG00000010461	RAB12	80	39.409	ENSLACG00000013571	RAB33B	86	39.409
ENSLACG00000010461	RAB12	67	46.707	ENSLACG00000022111	-	83	46.707
ENSLACG00000010461	RAB12	67	43.452	ENSLACG00000012521	RAB2A	79	43.452
ENSLACG00000010461	RAB12	66	41.818	ENSLACG00000011380	rab11al	76	41.818
ENSLACG00000010461	RAB12	65	33.533	ENSLACG00000001282	-	78	33.333
ENSLACG00000010461	RAB12	76	39.267	ENSLACG00000005168	RAB6A	94	37.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010461	RAB12	90	90.625	ENSG00000206418	RAB12	91	90.583	Homo_sapiens
ENSLACG00000010461	RAB12	89	82.883	ENSAMEG00000007452	RAB12	96	82.883	Ailuropoda_melanoleuca
ENSLACG00000010461	RAB12	90	86.996	ENSACIG00000020616	rab12	90	86.996	Amphilophus_citrinellus
ENSLACG00000010461	RAB12	90	86.996	ENSAOCG00000002130	rab12	91	86.996	Amphiprion_ocellaris
ENSLACG00000010461	RAB12	90	86.996	ENSAPEG00000013255	rab12	91	86.996	Amphiprion_percula
ENSLACG00000010461	RAB12	90	86.996	ENSATEG00000019683	rab12	91	86.996	Anabas_testudineus
ENSLACG00000010461	RAB12	89	89.593	ENSACAG00000003360	RAB12	86	89.238	Anolis_carolinensis
ENSLACG00000010461	RAB12	90	87.892	ENSACLG00000007696	rab12	91	87.892	Astatotilapia_calliptera
ENSLACG00000010461	RAB12	100	82.329	ENSAMXG00000004882	rab12	100	82.329	Astyanax_mexicanus
ENSLACG00000010461	RAB12	90	90.625	ENSBTAG00000010356	RAB12	91	90.583	Bos_taurus
ENSLACG00000010461	RAB12	90	90.625	ENSCJAG00000015468	RAB12	74	83.529	Callithrix_jacchus
ENSLACG00000010461	RAB12	90	90.625	ENSCAFG00020023721	RAB12	88	81.609	Canis_lupus_dingo
ENSLACG00000010461	RAB12	90	90.625	ENSCHIG00000016103	RAB12	91	90.583	Capra_hircus
ENSLACG00000010461	RAB12	84	89.524	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSLACG00000010461	RAB12	90	90.625	ENSCCAG00000022862	RAB12	91	90.583	Cebus_capucinus
ENSLACG00000010461	RAB12	90	90.625	ENSCATG00000037784	RAB12	93	90.583	Cercocebus_atys
ENSLACG00000010461	RAB12	90	90.625	ENSCSAG00000017569	RAB12	73	83.922	Chlorocebus_sabaeus
ENSLACG00000010461	RAB12	100	87.149	ENSCPBG00000028375	RAB12	100	86.747	Chrysemys_picta_bellii
ENSLACG00000010461	RAB12	88	90.455	ENSCANG00000031453	RAB12	100	90.455	Colobus_angolensis_palliatus
ENSLACG00000010461	RAB12	100	82.329	ENSCGRG00001006958	Rab12	76	88.789	Cricetulus_griseus_chok1gshd
ENSLACG00000010461	RAB12	90	87.444	ENSCSEG00000016933	rab12	91	87.444	Cynoglossus_semilaevis
ENSLACG00000010461	RAB12	100	81.928	ENSCVAG00000003539	rab12	100	81.928	Cyprinodon_variegatus
ENSLACG00000010461	RAB12	100	81.124	ENSDARG00000089428	rab12	100	80.723	Danio_rerio
ENSLACG00000010461	RAB12	90	90.179	ENSDNOG00000046064	RAB12	51	90.135	Dasypus_novemcinctus
ENSLACG00000010461	RAB12	90	89.778	ENSDORG00000008920	Rab12	98	89.686	Dipodomys_ordii
ENSLACG00000010461	RAB12	78	66.495	ENSEBUG00000006581	rab12	90	68.478	Eptatretus_burgeri
ENSLACG00000010461	RAB12	90	90.625	ENSEASG00005002926	RAB12	88	81.439	Equus_asinus_asinus
ENSLACG00000010461	RAB12	90	90.625	ENSECAG00000007384	RAB12	73	82.745	Equus_caballus
ENSLACG00000010461	RAB12	100	81.124	ENSELUG00000007123	rab12	100	79.920	Esox_lucius
ENSLACG00000010461	RAB12	90	90.625	ENSFCAG00000027710	RAB12	74	83.137	Felis_catus
ENSLACG00000010461	RAB12	88	87.215	ENSFHEG00000004319	rab12	90	86.996	Fundulus_heteroclitus
ENSLACG00000010461	RAB12	86	83.568	ENSGMOG00000012335	rab12	78	89.840	Gadus_morhua
ENSLACG00000010461	RAB12	100	86.800	ENSGALG00000033608	RAB12	100	86.800	Gallus_gallus
ENSLACG00000010461	RAB12	89	82.432	ENSGACG00000016639	rab12	90	88.776	Gasterosteus_aculeatus
ENSLACG00000010461	RAB12	100	86.747	ENSGAGG00000007278	RAB12	100	86.747	Gopherus_agassizii
ENSLACG00000010461	RAB12	90	87.892	ENSHBUG00000008497	rab12	91	87.892	Haplochromis_burtoni
ENSLACG00000010461	RAB12	92	84.746	ENSHGLG00000006189	RAB12	86	89.091	Heterocephalus_glaber_female
ENSLACG00000010461	RAB12	100	79.116	ENSHCOG00000012376	rab12	91	84.305	Hippocampus_comes
ENSLACG00000010461	RAB12	90	85.778	ENSIPUG00000017401	rab12	90	85.650	Ictalurus_punctatus
ENSLACG00000010461	RAB12	92	87.281	ENSSTOG00000025122	RAB12	98	90.090	Ictidomys_tridecemlineatus
ENSLACG00000010461	RAB12	91	89.868	ENSJJAG00000019064	Rab12	98	90.583	Jaculus_jaculus
ENSLACG00000010461	RAB12	100	79.920	ENSKMAG00000020056	rab12	92	85.650	Kryptolebias_marmoratus
ENSLACG00000010461	RAB12	90	86.547	ENSLBEG00000013756	rab12	91	86.547	Labrus_bergylta
ENSLACG00000010461	RAB12	94	89.700	ENSLOCG00000002680	rab12	90	91.480	Lepisosteus_oculatus
ENSLACG00000010461	RAB12	90	90.625	ENSMFAG00000043551	RAB12	91	90.583	Macaca_fascicularis
ENSLACG00000010461	RAB12	90	90.625	ENSMNEG00000040853	RAB12	88	90.583	Macaca_nemestrina
ENSLACG00000010461	RAB12	90	86.547	ENSMAMG00000006862	rab12	91	86.547	Mastacembelus_armatus
ENSLACG00000010461	RAB12	90	87.892	ENSMZEG00005024316	rab12	91	87.892	Maylandia_zebra
ENSLACG00000010461	RAB12	82	90.686	ENSMGAG00000009197	RAB12	100	90.686	Meleagris_gallopavo
ENSLACG00000010461	RAB12	100	82.731	ENSMAUG00000008371	Rab12	88	79.167	Mesocricetus_auratus
ENSLACG00000010461	RAB12	90	89.732	ENSMICG00000030661	RAB12	93	89.686	Microcebus_murinus
ENSLACG00000010461	RAB12	88	89.498	ENSMOCG00000000452	Rab12	100	89.498	Microtus_ochrogaster
ENSLACG00000010461	RAB12	92	90.351	ENSMODG00000021452	RAB12	77	81.439	Monodelphis_domestica
ENSLACG00000010461	RAB12	92	84.211	ENSMALG00000015762	rab12	91	84.753	Monopterus_albus
ENSLACG00000010461	RAB12	100	83.133	MGP_CAROLIEiJ_G0021839	Rab12	89	79.924	Mus_caroli
ENSLACG00000010461	RAB12	100	83.133	ENSMUSG00000023460	Rab12	92	90.135	Mus_musculus
ENSLACG00000010461	RAB12	100	83.133	MGP_PahariEiJ_G0020826	Rab12	92	90.135	Mus_pahari
ENSLACG00000010461	RAB12	100	83.133	MGP_SPRETEiJ_G0022750	Rab12	88	79.924	Mus_spretus
ENSLACG00000010461	RAB12	100	85.141	ENSMLUG00000002883	RAB12	92	91.031	Myotis_lucifugus
ENSLACG00000010461	RAB12	90	79.018	ENSNGAG00000019722	-	91	78.924	Nannospalax_galili
ENSLACG00000010461	RAB12	91	89.427	ENSNGAG00000024103	-	95	90.135	Nannospalax_galili
ENSLACG00000010461	RAB12	90	87.892	ENSNBRG00000014428	rab12	91	87.892	Neolamprologus_brichardi
ENSLACG00000010461	RAB12	100	84.739	ENSNLEG00000006939	RAB12	91	90.583	Nomascus_leucogenys
ENSLACG00000010461	RAB12	100	86.400	ENSMEUG00000000493	RAB12	91	90.583	Notamacropus_eugenii
ENSLACG00000010461	RAB12	88	90.411	ENSODEG00000006414	RAB12	100	90.411	Octodon_degus
ENSLACG00000010461	RAB12	90	87.892	ENSONIG00000018469	rab12	91	87.892	Oreochromis_niloticus
ENSLACG00000010461	RAB12	90	87.892	ENSORLG00000003902	rab12	91	87.892	Oryzias_latipes
ENSLACG00000010461	RAB12	90	88.341	ENSORLG00020005131	rab12	91	88.341	Oryzias_latipes_hni
ENSLACG00000010461	RAB12	90	87.892	ENSORLG00015007869	rab12	91	87.892	Oryzias_latipes_hsok
ENSLACG00000010461	RAB12	90	87.892	ENSOMEG00000008191	rab12	91	87.892	Oryzias_melastigma
ENSLACG00000010461	RAB12	84	90.952	ENSOGAG00000028002	RAB12	99	90.952	Otolemur_garnettii
ENSLACG00000010461	RAB12	84	90.476	ENSOARG00000000728	RAB12	92	87.444	Ovis_aries
ENSLACG00000010461	RAB12	83	90.821	ENSPPAG00000009152	RAB12	97	91.262	Pan_paniscus
ENSLACG00000010461	RAB12	90	90.625	ENSPPRG00000024521	RAB12	91	90.583	Panthera_pardus
ENSLACG00000010461	RAB12	90	90.625	ENSPTRG00000009853	RAB12	91	90.583	Pan_troglodytes
ENSLACG00000010461	RAB12	90	90.179	ENSPANG00000009320	RAB12	90	90.135	Papio_anubis
ENSLACG00000010461	RAB12	76	92.105	ENSPKIG00000008579	rab12	92	87.444	Paramormyrops_kingsleyae
ENSLACG00000010461	RAB12	100	79.518	ENSPMGG00000001890	rab12	91	85.202	Periophthalmus_magnuspinnatus
ENSLACG00000010461	RAB12	100	83.133	ENSPEMG00000021032	Rab12	77	89.686	Peromyscus_maniculatus_bairdii
ENSLACG00000010461	RAB12	100	86.400	ENSPCIG00000010453	RAB12	56	90.583	Phascolarctos_cinereus
ENSLACG00000010461	RAB12	91	85.841	ENSPFOG00000001579	rab12	90	86.547	Poecilia_formosa
ENSLACG00000010461	RAB12	91	85.841	ENSPLAG00000013594	rab12	90	86.547	Poecilia_latipinna
ENSLACG00000010461	RAB12	91	85.841	ENSPMEG00000010417	rab12	90	86.547	Poecilia_mexicana
ENSLACG00000010461	RAB12	91	85.841	ENSPREG00000017487	rab12	90	86.547	Poecilia_reticulata
ENSLACG00000010461	RAB12	90	90.625	ENSPPYG00000009015	-	74	83.137	Pongo_abelii
ENSLACG00000010461	RAB12	90	90.625	ENSPCAG00000015007	RAB12	91	90.583	Procavia_capensis
ENSLACG00000010461	RAB12	90	90.625	ENSPCOG00000019816	RAB12	91	90.583	Propithecus_coquereli
ENSLACG00000010461	RAB12	90	90.179	ENSPVAG00000002757	RAB12	91	90.135	Pteropus_vampyrus
ENSLACG00000010461	RAB12	90	87.892	ENSPNYG00000005654	rab12	91	87.892	Pundamilia_nyererei
ENSLACG00000010461	RAB12	90	87.892	ENSPNYG00000023905	rab12	91	87.892	Pundamilia_nyererei
ENSLACG00000010461	RAB12	100	83.936	ENSPNAG00000015031	rab12	100	83.936	Pygocentrus_nattereri
ENSLACG00000010461	RAB12	92	81.818	ENSRNOG00000019295	Rab12	92	86.283	Rattus_norvegicus
ENSLACG00000010461	RAB12	90	90.625	ENSRBIG00000028760	RAB12	96	90.583	Rhinopithecus_bieti
ENSLACG00000010461	RAB12	91	89.868	ENSRROG00000019249	RAB12	93	90.583	Rhinopithecus_roxellana
ENSLACG00000010461	RAB12	91	84.071	ENSSBOG00000021125	RAB12	84	87.671	Saimiri_boliviensis_boliviensis
ENSLACG00000010461	RAB12	92	85.652	ENSSHAG00000001489	RAB12	90	90.148	Sarcophilus_harrisii
ENSLACG00000010461	RAB12	88	85.845	ENSSMAG00000012678	rab12	91	85.650	Scophthalmus_maximus
ENSLACG00000010461	RAB12	90	86.996	ENSSDUG00000008505	rab12	91	86.996	Seriola_dumerili
ENSLACG00000010461	RAB12	90	86.996	ENSSLDG00000022239	rab12	91	86.996	Seriola_lalandi_dorsalis
ENSLACG00000010461	RAB12	100	86.345	ENSSPUG00000003222	RAB12	100	85.141	Sphenodon_punctatus
ENSLACG00000010461	RAB12	90	86.547	ENSSPAG00000010822	rab12	91	86.547	Stegastes_partitus
ENSLACG00000010461	RAB12	100	83.936	ENSSSCG00000038026	RAB12	91	89.686	Sus_scrofa
ENSLACG00000010461	RAB12	100	86.400	ENSTGUG00000009889	RAB12	100	86.400	Taeniopygia_guttata
ENSLACG00000010461	RAB12	100	80.321	ENSTRUG00000024455	rab12	91	85.650	Takifugu_rubripes
ENSLACG00000010461	RAB12	94	83.404	ENSTNIG00000014859	rab12	91	85.650	Tetraodon_nigroviridis
ENSLACG00000010461	RAB12	89	90.090	ENSTTRG00000008711	RAB12	100	90.090	Tursiops_truncatus
ENSLACG00000010461	RAB12	90	90.625	ENSUAMG00000018092	RAB12	91	90.583	Ursus_americanus
ENSLACG00000010461	RAB12	90	88.889	ENSVVUG00000011748	RAB12	99	90.411	Vulpes_vulpes
ENSLACG00000010461	RAB12	92	87.013	ENSXETG00000004289	rab12	88	80.727	Xenopus_tropicalis
ENSLACG00000010461	RAB12	91	84.513	ENSXCOG00000019310	rab12	90	85.202	Xiphophorus_couchianus
ENSLACG00000010461	RAB12	91	84.956	ENSXMAG00000023617	rab12	90	85.650	Xiphophorus_maculatus