EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 31927 bases
Position: chrJH128191.1:508115-540041
Accession: 102366990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011913	RRM_1	PF00076.22	6e-54	1	3
ENSLACP00000011913	RRM_1	PF00076.22	6e-54	2	3
ENSLACP00000011913	RRM_1	PF00076.22	6e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012004	-	1677	XM_006007838	ENSLACP00000011913	559 (aa)	XP_006007900	H3AQJ2

Gene Model

Click here to download ENSLACG00000010485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010485	-	76	30.178	ENSLACG00000005762	PABPC1L	67	32.468
ENSLACG00000010485	-	70	30.939	ENSLACG00000004395	PABPC1	55	30.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010485	-	100	56.690	ENSG00000106344	RBM28	96	57.436	Homo_sapiens
ENSLACG00000010485	-	96	69.620	ENSAMEG00000004776	RBM28	66	69.620	Ailuropoda_melanoleuca
ENSLACG00000010485	-	61	49.863	ENSACAG00000013153	-	50	50.746	Anolis_carolinensis
ENSLACG00000010485	-	100	57.420	ENSANAG00000033922	RBM28	68	76.667	Aotus_nancymaae
ENSLACG00000010485	-	99	49.215	ENSACLG00000025024	rbm28	73	47.538	Astatotilapia_calliptera
ENSLACG00000010485	-	50	76.667	ENSBTAG00000017001	RBM28	68	76.667	Bos_taurus
ENSLACG00000010485	-	100	57.473	ENSCJAG00000017731	RBM28	68	76.667	Callithrix_jacchus
ENSLACG00000010485	-	100	58.865	ENSCAFG00000001667	RBM28	74	58.304	Canis_familiaris
ENSLACG00000010485	-	100	58.865	ENSCAFG00020021648	RBM28	74	58.304	Canis_lupus_dingo
ENSLACG00000010485	-	100	57.143	ENSCHIG00000014146	RBM28	74	58.156	Capra_hircus
ENSLACG00000010485	-	100	58.230	ENSTSYG00000002892	RBM28	68	73.333	Carlito_syrichta
ENSLACG00000010485	-	81	46.256	ENSCAPG00000013218	RBM28	77	45.639	Cavia_aperea
ENSLACG00000010485	-	99	57.192	ENSCPOG00000006253	RBM28	74	56.870	Cavia_porcellus
ENSLACG00000010485	-	100	56.918	ENSCCAG00000035105	RBM28	68	76.667	Cebus_capucinus
ENSLACG00000010485	-	100	56.098	ENSCATG00000040497	RBM28	68	76.667	Cercocebus_atys
ENSLACG00000010485	-	100	56.042	ENSCSAG00000010161	RBM28	74	55.652	Chlorocebus_sabaeus
ENSLACG00000010485	-	71	56.250	ENSCSAVG00000007149	-	54	56.250	Ciona_savignyi
ENSLACG00000010485	-	90	55.684	ENSCANG00000038397	RBM28	67	76.667	Colobus_angolensis_palliatus
ENSLACG00000010485	-	52	59.333	ENSCGRG00000005098	Rbm28	74	56.316	Cricetulus_griseus_crigri
ENSLACG00000010485	-	82	55.212	ENSDARG00000025332	rbm28	77	52.062	Danio_rerio
ENSLACG00000010485	-	100	56.667	ENSDNOG00000001124	RBM28	74	56.866	Dasypus_novemcinctus
ENSLACG00000010485	-	82	34.914	FBgn0260456	CG4806	63	32.285	Drosophila_melanogaster
ENSLACG00000010485	-	74	49.388	ENSEBUG00000004419	rbm28	71	40.183	Eptatretus_burgeri
ENSLACG00000010485	-	54	59.934	ENSEASG00005008528	RBM28	74	57.292	Equus_asinus_asinus
ENSLACG00000010485	-	54	59.603	ENSECAG00000007745	RBM28	74	57.192	Equus_caballus
ENSLACG00000010485	-	100	51.134	ENSEEUG00000002389	RBM28	74	51.134	Erinaceus_europaeus
ENSLACG00000010485	-	100	59.431	ENSFCAG00000000946	RBM28	67	76.667	Felis_catus
ENSLACG00000010485	-	99	57.829	ENSFDAG00000010169	RBM28	74	56.491	Fukomys_damarensis
ENSLACG00000010485	-	99	49.016	ENSGMOG00000007091	rbm28	77	47.500	Gadus_morhua
ENSLACG00000010485	-	85	55.346	ENSGAGG00000008873	RBM28	55	78.295	Gopherus_agassizii
ENSLACG00000010485	-	94	54.898	ENSGGOG00000004644	RBM28	72	56.343	Gorilla_gorilla
ENSLACG00000010485	-	99	49.073	ENSHBUG00000009611	rbm28	76	47.458	Haplochromis_burtoni
ENSLACG00000010485	-	99	57.143	ENSHGLG00000005409	RBM28	74	56.743	Heterocephalus_glaber_female
ENSLACG00000010485	-	99	57.143	ENSHGLG00100016458	RBM28	73	56.991	Heterocephalus_glaber_male
ENSLACG00000010485	-	75	53.889	ENSHCOG00000010597	rbm28	75	39.192	Hippocampus_comes
ENSLACG00000010485	-	100	55.842	ENSSTOG00000002169	RBM28	74	56.552	Ictidomys_tridecemlineatus
ENSLACG00000010485	-	73	70.520	ENSJJAG00000022400	Rbm28	57	70.520	Jaculus_jaculus
ENSLACG00000010485	-	99	69.189	ENSLOCG00000015541	rbm28	76	69.189	Lepisosteus_oculatus
ENSLACG00000010485	-	100	56.272	ENSMFAG00000031036	RBM28	68	76.667	Macaca_fascicularis
ENSLACG00000010485	-	100	56.000	ENSMMUG00000007250	RBM28	68	76.667	Macaca_mulatta
ENSLACG00000010485	-	100	57.398	ENSMNEG00000036970	RBM28	68	76.667	Macaca_nemestrina
ENSLACG00000010485	-	81	58.065	ENSMLEG00000037717	RBM28	73	58.351	Mandrillus_leucophaeus
ENSLACG00000010485	-	99	50.783	ENSMAMG00000008525	rbm28	73	49.233	Mastacembelus_armatus
ENSLACG00000010485	-	92	47.826	ENSMZEG00005019625	rbm28	72	46.239	Maylandia_zebra
ENSLACG00000010485	-	54	57.096	ENSMAUG00000002263	Rbm28	75	55.461	Mesocricetus_auratus
ENSLACG00000010485	-	100	57.368	ENSMOCG00000014615	Rbm28	74	56.738	Microtus_ochrogaster
ENSLACG00000010485	-	100	56.696	ENSMODG00000015151	RBM28	74	56.969	Monodelphis_domestica
ENSLACG00000010485	-	100	56.667	MGP_CAROLIEiJ_G0028162	Rbm28	74	55.888	Mus_caroli
ENSLACG00000010485	-	100	55.672	ENSMUSG00000029701	Rbm28	74	56.239	Mus_musculus
ENSLACG00000010485	-	100	55.888	MGP_PahariEiJ_G0021920	Rbm28	74	56.483	Mus_pahari
ENSLACG00000010485	-	100	55.672	MGP_SPRETEiJ_G0029162	Rbm28	74	56.239	Mus_spretus
ENSLACG00000010485	-	100	58.246	ENSMPUG00000006511	RBM28	74	58.115	Mustela_putorius_furo
ENSLACG00000010485	-	100	57.793	ENSMLUG00000002186	RBM28	74	57.618	Myotis_lucifugus
ENSLACG00000010485	-	100	55.615	ENSNGAG00000017946	-	76	54.367	Nannospalax_galili
ENSLACG00000010485	-	100	57.041	ENSNGAG00000006480	-	75	56.491	Nannospalax_galili
ENSLACG00000010485	-	100	56.119	ENSNLEG00000012307	RBM28	68	76.667	Nomascus_leucogenys
ENSLACG00000010485	-	75	70.440	ENSMEUG00000009611	RBM28	58	69.753	Notamacropus_eugenii
ENSLACG00000010485	-	85	56.612	ENSOPRG00000015140	RBM28	64	56.198	Ochotona_princeps
ENSLACG00000010485	-	99	56.446	ENSODEG00000003213	-	76	56.119	Octodon_degus
ENSLACG00000010485	-	99	50.783	ENSODEG00000013217	-	61	65.625	Octodon_degus
ENSLACG00000010485	-	100	51.557	ENSOANG00000000815	-	73	49.578	Ornithorhynchus_anatinus
ENSLACG00000010485	-	100	55.536	ENSOCUG00000003009	RBM28	74	56.250	Oryctolagus_cuniculus
ENSLACG00000010485	-	99	48.129	ENSORLG00000009636	rbm28	73	50.352	Oryzias_latipes
ENSLACG00000010485	-	84	58.065	ENSORLG00015015030	rbm28	72	58.065	Oryzias_latipes_hsok
ENSLACG00000010485	-	75	75.862	ENSOGAG00000006011	RBM28	68	75.862	Otolemur_garnettii
ENSLACG00000010485	-	100	56.620	ENSOARG00000002547	RBM28	74	58.451	Ovis_aries
ENSLACG00000010485	-	100	56.000	ENSPPAG00000041730	RBM28	68	76.667	Pan_paniscus
ENSLACG00000010485	-	100	58.824	ENSPPRG00000004420	RBM28	67	76.667	Panthera_pardus
ENSLACG00000010485	-	100	58.824	ENSPTIG00000008550	RBM28	67	76.667	Panthera_tigris_altaica
ENSLACG00000010485	-	100	55.826	ENSPTRG00000019659	RBM28	68	76.667	Pan_troglodytes
ENSLACG00000010485	-	100	55.826	ENSPANG00000022295	RBM28	68	76.667	Papio_anubis
ENSLACG00000010485	-	81	61.458	ENSPMGG00000012840	rbm28	78	48.746	Periophthalmus_magnuspinnatus
ENSLACG00000010485	-	100	56.085	ENSPCIG00000012810	RBM28	74	56.643	Phascolarctos_cinereus
ENSLACG00000010485	-	100	56.392	ENSPPYG00000017975	RBM28	74	57.597	Pongo_abelii
ENSLACG00000010485	-	79	52.551	ENSPCAG00000008223	RBM28	65	52.551	Procavia_capensis
ENSLACG00000010485	-	99	48.731	ENSPNYG00000014003	rbm28	73	47.199	Pundamilia_nyererei
ENSLACG00000010485	-	100	56.021	ENSRNOG00000005468	Rbm28	74	56.217	Rattus_norvegicus
ENSLACG00000010485	-	100	55.882	ENSRBIG00000033990	RBM28	68	76.667	Rhinopithecus_bieti
ENSLACG00000010485	-	100	55.459	ENSRROG00000040747	RBM28	68	76.667	Rhinopithecus_roxellana
ENSLACG00000010485	-	97	54.628	ENSSHAG00000017017	RBM28	74	54.529	Sarcophilus_harrisii
ENSLACG00000010485	-	76	66.275	ENSSARG00000008303	RBM28	59	66.275	Sorex_araneus
ENSLACG00000010485	-	57	75.000	ENSSPUG00000000838	RBM28	56	75.000	Sphenodon_punctatus
ENSLACG00000010485	-	100	58.031	ENSSSCG00000031847	RBM28	74	59.402	Sus_scrofa
ENSLACG00000010485	-	100	48.691	ENSTRUG00000013311	rbm28	73	48.962	Takifugu_rubripes
ENSLACG00000010485	-	100	48.359	ENSTNIG00000017962	rbm28	73	45.545	Tetraodon_nigroviridis
ENSLACG00000010485	-	89	59.296	ENSTBEG00000012749	RBM28	58	59.296	Tupaia_belangeri
ENSLACG00000010485	-	90	69.388	ENSUAMG00000006949	RBM28	71	69.388	Ursus_americanus
ENSLACG00000010485	-	100	56.846	ENSUMAG00000005997	RBM28	74	57.143	Ursus_maritimus
ENSLACG00000010485	-	81	50.215	ENSVPAG00000008304	RBM28	62	49.686	Vicugna_pacos
ENSLACG00000010485	-	100	58.865	ENSVVUG00000007270	RBM28	74	58.511	Vulpes_vulpes
ENSLACG00000010485	-	99	50.865	ENSXETG00000009271	rbm28	73	51.652	Xenopus_tropicalis