EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010529 (Gene tree)
Gene ID: 102349119
Gene Symbol: DDX1
Alias: DBP-RB
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 50595 bases
Position: chrJH127862.1:512165-562759
Accession: 102349119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011963	DEAD	PF00270.29	6.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012054	DDX1-201	5750	XM_006006148	ENSLACP00000011963	740 (aa)	XP_006006210	H3AQP2

Gene Model

Click here to download ENSLACG00000010529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010529	DDX1	53	40.000	ENSLACG00000017050	DDX55	59	40.000
ENSLACG00000010529	DDX1	58	32.308	ENSLACG00000007753	ddx3xa	56	32.308
ENSLACG00000010529	DDX1	53	40.678	ENSLACG00000017153	DDX6	69	40.678
ENSLACG00000010529	DDX1	54	37.705	ENSLACG00000005578	DDX28	63	37.705
ENSLACG00000010529	DDX1	54	50.000	ENSLACG00000013814	DDX47	76	50.000
ENSLACG00000010529	DDX1	54	46.429	ENSLACG00000012514	DDX52	57	46.429
ENSLACG00000010529	DDX1	64	37.879	ENSLACG00000008244	DDX49	85	37.879
ENSLACG00000010529	DDX1	56	34.921	ENSLACG00000008136	DDX31	56	35.052
ENSLACG00000010529	DDX1	53	40.678	ENSLACG00000015214	ddx61	70	40.678
ENSLACG00000010529	DDX1	57	36.066	ENSLACG00000016977	DDX23	52	36.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010529	DDX1	100	87.568	ENSG00000079785	DDX1	100	87.568	Homo_sapiens
ENSLACG00000010529	DDX1	100	83.649	ENSAPOG00000003166	ddx1	100	83.649	Acanthochromis_polyacanthus
ENSLACG00000010529	DDX1	99	87.415	ENSAMEG00000001071	DDX1	99	87.415	Ailuropoda_melanoleuca
ENSLACG00000010529	DDX1	89	81.832	ENSACIG00000017422	ddx1	99	81.221	Amphilophus_citrinellus
ENSLACG00000010529	DDX1	89	82.067	ENSAOCG00000015436	ddx1	94	83.805	Amphiprion_ocellaris
ENSLACG00000010529	DDX1	100	84.730	ENSAPEG00000007699	ddx1	100	84.730	Amphiprion_percula
ENSLACG00000010529	DDX1	94	83.811	ENSATEG00000003965	ddx1	98	82.901	Anabas_testudineus
ENSLACG00000010529	DDX1	100	88.172	ENSAPLG00000011093	DDX1	100	88.172	Anas_platyrhynchos
ENSLACG00000010529	DDX1	94	87.966	ENSACAG00000011036	DDX1	99	87.966	Anolis_carolinensis
ENSLACG00000010529	DDX1	100	87.838	ENSANAG00000037912	DDX1	100	87.838	Aotus_nancymaae
ENSLACG00000010529	DDX1	99	83.718	ENSACLG00000008850	ddx1	99	82.569	Astatotilapia_calliptera
ENSLACG00000010529	DDX1	100	84.054	ENSAMXG00000002100	ddx1	100	84.054	Astyanax_mexicanus
ENSLACG00000010529	DDX1	100	87.838	ENSBTAG00000009906	DDX1	100	87.838	Bos_taurus
ENSLACG00000010529	DDX1	98	46.467	WBGene00021938	Y55F3BR.1	98	46.467	Caenorhabditis_elegans
ENSLACG00000010529	DDX1	100	87.838	ENSCJAG00000007076	DDX1	100	87.838	Callithrix_jacchus
ENSLACG00000010529	DDX1	100	87.838	ENSCAFG00000003686	DDX1	100	87.838	Canis_familiaris
ENSLACG00000010529	DDX1	100	87.838	ENSCAFG00020026083	DDX1	100	87.838	Canis_lupus_dingo
ENSLACG00000010529	DDX1	100	88.108	ENSCHIG00000011046	DDX1	100	88.108	Capra_hircus
ENSLACG00000010529	DDX1	100	87.432	ENSTSYG00000002477	-	100	87.432	Carlito_syrichta
ENSLACG00000010529	DDX1	99	62.822	ENSTSYG00000037396	-	97	65.455	Carlito_syrichta
ENSLACG00000010529	DDX1	86	69.565	ENSCAPG00000008906	-	93	69.829	Cavia_aperea
ENSLACG00000010529	DDX1	88	85.299	ENSCPOG00000009816	-	96	85.299	Cavia_porcellus
ENSLACG00000010529	DDX1	68	87.649	ENSCPOG00000032467	-	100	87.649	Cavia_porcellus
ENSLACG00000010529	DDX1	100	87.568	ENSCCAG00000030085	DDX1	100	87.568	Cebus_capucinus
ENSLACG00000010529	DDX1	100	87.703	ENSCATG00000033924	DDX1	100	87.703	Cercocebus_atys
ENSLACG00000010529	DDX1	100	87.973	ENSCLAG00000005434	DDX1	100	87.973	Chinchilla_lanigera
ENSLACG00000010529	DDX1	100	87.703	ENSCSAG00000007883	DDX1	100	87.703	Chlorocebus_sabaeus
ENSLACG00000010529	DDX1	70	88.836	ENSCHOG00000002171	DDX1	70	88.836	Choloepus_hoffmanni
ENSLACG00000010529	DDX1	99	83.152	ENSCPBG00000013330	DDX1	99	88.387	Chrysemys_picta_bellii
ENSLACG00000010529	DDX1	100	64.611	ENSCING00000001176	-	100	64.619	Ciona_intestinalis
ENSLACG00000010529	DDX1	98	60.165	ENSCSAVG00000003028	-	99	60.302	Ciona_savignyi
ENSLACG00000010529	DDX1	100	87.568	ENSCANG00000031530	DDX1	100	87.568	Colobus_angolensis_palliatus
ENSLACG00000010529	DDX1	100	87.297	ENSCGRG00001013025	Ddx1	100	87.297	Cricetulus_griseus_chok1gshd
ENSLACG00000010529	DDX1	100	87.297	ENSCGRG00000000676	Ddx1	100	87.297	Cricetulus_griseus_crigri
ENSLACG00000010529	DDX1	99	84.332	ENSCSEG00000002630	ddx1	100	84.332	Cynoglossus_semilaevis
ENSLACG00000010529	DDX1	99	84.196	ENSCVAG00000020927	ddx1	100	84.196	Cyprinodon_variegatus
ENSLACG00000010529	DDX1	100	84.189	ENSDARG00000032117	ddx1	100	84.196	Danio_rerio
ENSLACG00000010529	DDX1	100	88.108	ENSDNOG00000006905	DDX1	100	88.108	Dasypus_novemcinctus
ENSLACG00000010529	DDX1	100	87.432	ENSDORG00000012847	Ddx1	100	87.432	Dipodomys_ordii
ENSLACG00000010529	DDX1	98	59.371	FBgn0015075	Ddx1	99	59.781	Drosophila_melanogaster
ENSLACG00000010529	DDX1	100	78.514	ENSETEG00000014259	DDX1	100	78.514	Echinops_telfairi
ENSLACG00000010529	DDX1	64	76.271	ENSEBUG00000009800	-	99	76.271	Eptatretus_burgeri
ENSLACG00000010529	DDX1	100	87.838	ENSEASG00005009335	DDX1	92	87.838	Equus_asinus_asinus
ENSLACG00000010529	DDX1	94	87.231	ENSECAG00000016396	DDX1	100	87.231	Equus_caballus
ENSLACG00000010529	DDX1	89	84.934	ENSEEUG00000001606	DDX1	89	84.934	Erinaceus_europaeus
ENSLACG00000010529	DDX1	100	81.916	ENSELUG00000006743	ddx1	100	81.916	Esox_lucius
ENSLACG00000010529	DDX1	100	88.108	ENSFCAG00000004680	DDX1	100	88.108	Felis_catus
ENSLACG00000010529	DDX1	100	88.378	ENSFALG00000008696	DDX1	100	88.378	Ficedula_albicollis
ENSLACG00000010529	DDX1	100	88.108	ENSFDAG00000021305	DDX1	100	88.108	Fukomys_damarensis
ENSLACG00000010529	DDX1	100	83.649	ENSFHEG00000008444	ddx1	100	83.649	Fundulus_heteroclitus
ENSLACG00000010529	DDX1	100	82.369	ENSGMOG00000011300	ddx1	100	82.369	Gadus_morhua
ENSLACG00000010529	DDX1	100	88.514	ENSGALG00000016461	DDX1	100	88.514	Gallus_gallus
ENSLACG00000010529	DDX1	100	84.054	ENSGAFG00000004706	ddx1	100	84.054	Gambusia_affinis
ENSLACG00000010529	DDX1	100	81.892	ENSGACG00000011162	ddx1	100	81.892	Gasterosteus_aculeatus
ENSLACG00000010529	DDX1	100	89.054	ENSGAGG00000021020	DDX1	100	89.054	Gopherus_agassizii
ENSLACG00000010529	DDX1	100	87.568	ENSGGOG00000012482	DDX1	100	87.568	Gorilla_gorilla
ENSLACG00000010529	DDX1	100	83.649	ENSHBUG00000014069	ddx1	100	83.649	Haplochromis_burtoni
ENSLACG00000010529	DDX1	100	87.703	ENSHGLG00000000801	DDX1	100	87.703	Heterocephalus_glaber_female
ENSLACG00000010529	DDX1	99	87.602	ENSHGLG00100000711	DDX1	100	87.602	Heterocephalus_glaber_male
ENSLACG00000010529	DDX1	100	83.784	ENSHCOG00000011492	ddx1	96	83.784	Hippocampus_comes
ENSLACG00000010529	DDX1	100	83.108	ENSIPUG00000003494	ddx1	100	83.108	Ictalurus_punctatus
ENSLACG00000010529	DDX1	99	87.466	ENSSTOG00000003977	DDX1	100	87.466	Ictidomys_tridecemlineatus
ENSLACG00000010529	DDX1	89	83.511	ENSJJAG00000013315	Ddx1	100	83.511	Jaculus_jaculus
ENSLACG00000010529	DDX1	100	84.189	ENSKMAG00000011340	ddx1	100	84.189	Kryptolebias_marmoratus
ENSLACG00000010529	DDX1	88	79.084	ENSLBEG00000008692	ddx1	99	78.899	Labrus_bergylta
ENSLACG00000010529	DDX1	100	86.327	ENSLOCG00000016473	ddx1	100	86.327	Lepisosteus_oculatus
ENSLACG00000010529	DDX1	99	88.467	ENSLAFG00000002213	DDX1	99	88.467	Loxodonta_africana
ENSLACG00000010529	DDX1	100	87.703	ENSMFAG00000033987	DDX1	100	87.703	Macaca_fascicularis
ENSLACG00000010529	DDX1	100	87.703	ENSMMUG00000023437	DDX1	100	87.703	Macaca_mulatta
ENSLACG00000010529	DDX1	100	87.703	ENSMNEG00000029189	DDX1	100	87.703	Macaca_nemestrina
ENSLACG00000010529	DDX1	100	87.703	ENSMLEG00000030787	DDX1	100	87.703	Mandrillus_leucophaeus
ENSLACG00000010529	DDX1	100	83.784	ENSMAMG00000015916	ddx1	100	83.784	Mastacembelus_armatus
ENSLACG00000010529	DDX1	99	83.718	ENSMZEG00005015207	ddx1	99	82.569	Maylandia_zebra
ENSLACG00000010529	DDX1	99	84.261	ENSMGAG00000014025	DDX1	100	84.261	Meleagris_gallopavo
ENSLACG00000010529	DDX1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSLACG00000010529	DDX1	100	87.703	ENSMICG00000001023	DDX1	100	87.703	Microcebus_murinus
ENSLACG00000010529	DDX1	100	87.432	ENSMOCG00000000257	Ddx1	100	87.432	Microtus_ochrogaster
ENSLACG00000010529	DDX1	89	82.595	ENSMMOG00000015397	ddx1	99	82.595	Mola_mola
ENSLACG00000010529	DDX1	99	88.467	ENSMODG00000010275	DDX1	99	88.467	Monodelphis_domestica
ENSLACG00000010529	DDX1	100	84.324	ENSMALG00000016409	ddx1	100	84.324	Monopterus_albus
ENSLACG00000010529	DDX1	100	87.432	MGP_CAROLIEiJ_G0017622	Ddx1	100	87.432	Mus_caroli
ENSLACG00000010529	DDX1	100	87.297	ENSMUSG00000037149	Ddx1	100	87.297	Mus_musculus
ENSLACG00000010529	DDX1	100	87.432	MGP_PahariEiJ_G0029378	Ddx1	100	87.432	Mus_pahari
ENSLACG00000010529	DDX1	100	87.297	MGP_SPRETEiJ_G0018464	Ddx1	100	87.297	Mus_spretus
ENSLACG00000010529	DDX1	100	87.838	ENSMPUG00000013606	DDX1	100	87.838	Mustela_putorius_furo
ENSLACG00000010529	DDX1	99	87.092	ENSMLUG00000003027	DDX1	98	87.092	Myotis_lucifugus
ENSLACG00000010529	DDX1	99	87.602	ENSNGAG00000015783	Ddx1	100	87.602	Nannospalax_galili
ENSLACG00000010529	DDX1	78	79.585	ENSNBRG00000020677	ddx1	94	79.585	Neolamprologus_brichardi
ENSLACG00000010529	DDX1	100	87.703	ENSNLEG00000014417	DDX1	100	87.703	Nomascus_leucogenys
ENSLACG00000010529	DDX1	99	86.320	ENSMEUG00000008254	DDX1	99	86.320	Notamacropus_eugenii
ENSLACG00000010529	DDX1	92	73.070	ENSOPRG00000004290	DDX1	100	61.486	Ochotona_princeps
ENSLACG00000010529	DDX1	100	87.973	ENSODEG00000000569	DDX1	100	87.973	Octodon_degus
ENSLACG00000010529	DDX1	100	83.941	ENSONIG00000000513	ddx1	100	83.941	Oreochromis_niloticus
ENSLACG00000010529	DDX1	75	85.842	ENSOANG00000005450	DDX1	99	85.842	Ornithorhynchus_anatinus
ENSLACG00000010529	DDX1	100	87.568	ENSOCUG00000007010	DDX1	100	87.568	Oryctolagus_cuniculus
ENSLACG00000010529	DDX1	100	83.649	ENSORLG00000016709	ddx1	100	83.649	Oryzias_latipes
ENSLACG00000010529	DDX1	99	83.379	ENSORLG00020003290	ddx1	100	83.379	Oryzias_latipes_hni
ENSLACG00000010529	DDX1	100	83.243	ENSORLG00015022438	ddx1	100	83.243	Oryzias_latipes_hsok
ENSLACG00000010529	DDX1	100	78.784	ENSOMEG00000017620	ddx1	100	77.297	Oryzias_melastigma
ENSLACG00000010529	DDX1	99	87.500	ENSOGAG00000008730	DDX1	100	87.500	Otolemur_garnettii
ENSLACG00000010529	DDX1	99	87.772	ENSOARG00000016369	DDX1	100	87.772	Ovis_aries
ENSLACG00000010529	DDX1	100	87.703	ENSPPAG00000027432	DDX1	100	87.703	Pan_paniscus
ENSLACG00000010529	DDX1	100	88.108	ENSPPRG00000020556	DDX1	100	88.108	Panthera_pardus
ENSLACG00000010529	DDX1	100	88.108	ENSPTIG00000008267	DDX1	100	88.108	Panthera_tigris_altaica
ENSLACG00000010529	DDX1	100	87.703	ENSPTRG00000011670	DDX1	100	87.703	Pan_troglodytes
ENSLACG00000010529	DDX1	100	87.703	ENSPANG00000025185	DDX1	100	87.703	Papio_anubis
ENSLACG00000010529	DDX1	100	83.108	ENSPKIG00000012466	ddx1	100	83.243	Paramormyrops_kingsleyae
ENSLACG00000010529	DDX1	54	88.337	ENSPSIG00000012292	DDX1	100	88.337	Pelodiscus_sinensis
ENSLACG00000010529	DDX1	100	81.892	ENSPMGG00000000782	ddx1	100	80.405	Periophthalmus_magnuspinnatus
ENSLACG00000010529	DDX1	100	87.703	ENSPEMG00000016389	Ddx1	100	87.703	Peromyscus_maniculatus_bairdii
ENSLACG00000010529	DDX1	99	77.717	ENSPMAG00000009118	-	100	77.717	Petromyzon_marinus
ENSLACG00000010529	DDX1	100	89.189	ENSPCIG00000010941	DDX1	100	89.189	Phascolarctos_cinereus
ENSLACG00000010529	DDX1	100	84.459	ENSPFOG00000011921	ddx1	100	84.459	Poecilia_formosa
ENSLACG00000010529	DDX1	86	82.737	ENSPFOG00000006873	-	100	82.737	Poecilia_formosa
ENSLACG00000010529	DDX1	100	84.324	ENSPLAG00000005939	ddx1	100	84.324	Poecilia_latipinna
ENSLACG00000010529	DDX1	100	84.730	ENSPMEG00000011140	ddx1	100	84.730	Poecilia_mexicana
ENSLACG00000010529	DDX1	100	84.324	ENSPREG00000011751	ddx1	100	84.324	Poecilia_reticulata
ENSLACG00000010529	DDX1	100	87.568	ENSPPYG00000012638	DDX1	100	87.568	Pongo_abelii
ENSLACG00000010529	DDX1	100	75.541	ENSPCAG00000001491	DDX1	100	75.541	Procavia_capensis
ENSLACG00000010529	DDX1	99	85.695	ENSPCOG00000028185	DDX1	99	85.695	Propithecus_coquereli
ENSLACG00000010529	DDX1	100	88.108	ENSPVAG00000013618	DDX1	100	88.108	Pteropus_vampyrus
ENSLACG00000010529	DDX1	100	83.514	ENSPNYG00000013839	ddx1	100	83.514	Pundamilia_nyererei
ENSLACG00000010529	DDX1	89	81.832	ENSPNAG00000017033	ddx1	97	81.832	Pygocentrus_nattereri
ENSLACG00000010529	DDX1	100	87.568	ENSRNOG00000006652	Ddx1	100	87.568	Rattus_norvegicus
ENSLACG00000010529	DDX1	100	86.622	ENSRBIG00000041664	DDX1	100	86.720	Rhinopithecus_bieti
ENSLACG00000010529	DDX1	100	87.297	ENSRROG00000031167	DDX1	100	87.297	Rhinopithecus_roxellana
ENSLACG00000010529	DDX1	100	87.703	ENSSBOG00000027577	DDX1	100	87.703	Saimiri_boliviensis_boliviensis
ENSLACG00000010529	DDX1	99	81.140	ENSSHAG00000009363	DDX1	99	81.140	Sarcophilus_harrisii
ENSLACG00000010529	DDX1	100	83.378	ENSSFOG00015014476	ddx1	100	83.378	Scleropages_formosus
ENSLACG00000010529	DDX1	100	83.243	ENSSMAG00000010094	ddx1	100	83.243	Scophthalmus_maximus
ENSLACG00000010529	DDX1	100	83.919	ENSSDUG00000012334	ddx1	100	83.919	Seriola_dumerili
ENSLACG00000010529	DDX1	100	83.784	ENSSLDG00000025345	ddx1	100	83.784	Seriola_lalandi_dorsalis
ENSLACG00000010529	DDX1	99	78.202	ENSSARG00000004536	DDX1	100	78.202	Sorex_araneus
ENSLACG00000010529	DDX1	100	87.432	ENSSPUG00000018835	DDX1	100	87.432	Sphenodon_punctatus
ENSLACG00000010529	DDX1	100	80.135	ENSSPAG00000023554	ddx1	100	80.135	Stegastes_partitus
ENSLACG00000010529	DDX1	100	87.432	ENSSSCG00000008619	DDX1	100	87.432	Sus_scrofa
ENSLACG00000010529	DDX1	100	88.108	ENSTGUG00000013096	DDX1	100	88.108	Taeniopygia_guttata
ENSLACG00000010529	DDX1	99	83.062	ENSTRUG00000015765	ddx1	99	83.062	Takifugu_rubripes
ENSLACG00000010529	DDX1	100	83.649	ENSTNIG00000016309	ddx1	100	83.649	Tetraodon_nigroviridis
ENSLACG00000010529	DDX1	99	84.060	ENSTBEG00000008454	DDX1	100	84.060	Tupaia_belangeri
ENSLACG00000010529	DDX1	100	87.432	ENSTTRG00000005081	DDX1	100	87.432	Tursiops_truncatus
ENSLACG00000010529	DDX1	71	77.694	ENSUAMG00000017375	DDX1	87	84.435	Ursus_americanus
ENSLACG00000010529	DDX1	99	87.738	ENSUMAG00000023450	DDX1	100	87.738	Ursus_maritimus
ENSLACG00000010529	DDX1	85	92.308	ENSVPAG00000007764	DDX1	85	92.308	Vicugna_pacos
ENSLACG00000010529	DDX1	99	87.755	ENSVVUG00000013085	DDX1	96	87.755	Vulpes_vulpes
ENSLACG00000010529	DDX1	100	87.568	ENSXETG00000017825	ddx1	100	87.568	Xenopus_tropicalis
ENSLACG00000010529	DDX1	100	81.660	ENSXCOG00000007082	ddx1	100	81.660	Xiphophorus_couchianus
ENSLACG00000010529	DDX1	100	84.054	ENSXMAG00000004555	ddx1	100	84.054	Xiphophorus_maculatus