EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1007 bases
Position: chrJH127533.1:512710-513716
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000011979	zf-CCHC	PF00098.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012070	-	870	-	ENSLACP00000011979	290 (aa)	-	H3AQQ8

Gene Model

Click here to download ENSLACG00000010543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010543	-	99	53.000	ENSLACG00000002363	-	71	53.000
ENSLACG00000010543	-	99	46.959	ENSLACG00000002836	-	86	46.959
ENSLACG00000010543	-	100	50.847	ENSLACG00000004689	-	82	50.847
ENSLACG00000010543	-	100	55.219	ENSLACG00000000325	-	85	55.442
ENSLACG00000010543	-	100	59.801	ENSLACG00000005078	-	96	59.801
ENSLACG00000010543	-	100	76.316	ENSLACG00000002057	-	87	78.667
ENSLACG00000010543	-	100	82.026	ENSLACG00000012908	-	100	82.026
ENSLACG00000010543	-	96	53.405	ENSLACG00000004000	-	85	53.405
ENSLACG00000010543	-	91	54.212	ENSLACG00000004531	-	81	54.212
ENSLACG00000010543	-	96	59.859	ENSLACG00000002768	-	74	59.859
ENSLACG00000010543	-	82	62.449	ENSLACG00000012373	-	81	63.223
ENSLACG00000010543	-	100	56.757	ENSLACG00000008039	-	87	56.757
ENSLACG00000010543	-	98	53.004	ENSLACG00000017942	-	86	53.004
ENSLACG00000010543	-	99	52.203	ENSLACG00000006128	-	86	52.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010543	-	84	44.280	ENSCPBG00000028243	-	87	44.280	Chrysemys_picta_bellii
ENSLACG00000010543	-	72	40.541	ENSGAGG00000002892	-	98	40.541	Gopherus_agassizii
ENSLACG00000010543	-	100	49.320	ENSXETG00000026538	-	71	49.320	Xenopus_tropicalis
ENSLACG00000010543	-	100	48.485	ENSXETG00000005082	ankrd31	72	48.485	Xenopus_tropicalis
ENSLACG00000010543	-	100	48.822	ENSXETG00000006819	-	66	48.822	Xenopus_tropicalis
ENSLACG00000010543	-	100	48.464	ENSXETG00000019379	-	72	48.464	Xenopus_tropicalis