EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010650 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 64140 bases
Position: chrJH127711.1:521842-585981
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012097	TUDOR	PF00567.24	6.5e-28	1	2
ENSLACP00000012097	TUDOR	PF00567.24	6.5e-28	2	2
ENSLACP00000012097	DEAD	PF00270.29	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012189	-	3312	-	ENSLACP00000012097	1104 (aa)	-	H3AR26

Gene Model

Click here to download ENSLACG00000010650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010650	-	84	46.207	ENSAPOG00000006421	tdrd12	90	46.207	Acanthochromis_polyacanthus
ENSLACG00000010650	-	71	51.580	ENSAMEG00000015440	-	95	51.596	Ailuropoda_melanoleuca
ENSLACG00000010650	-	86	44.059	ENSACIG00000021652	tdrd12	93	44.059	Amphilophus_citrinellus
ENSLACG00000010650	-	79	44.428	ENSAOCG00000016463	tdrd12	74	44.428	Amphiprion_ocellaris
ENSLACG00000010650	-	81	46.599	ENSAPEG00000015105	tdrd12	87	46.599	Amphiprion_percula
ENSLACG00000010650	-	84	46.196	ENSATEG00000011608	tdrd12	91	46.196	Anabas_testudineus
ENSLACG00000010650	-	98	48.263	ENSAPLG00000011417	-	97	51.598	Anas_platyrhynchos
ENSLACG00000010650	-	65	55.387	ENSACAG00000029615	-	75	55.387	Anolis_carolinensis
ENSLACG00000010650	-	99	50.272	ENSANAG00000023166	-	99	44.691	Aotus_nancymaae
ENSLACG00000010650	-	81	49.420	ENSAMXG00000013811	tdrd12	89	49.420	Astyanax_mexicanus
ENSLACG00000010650	-	99	50.362	ENSCJAG00000000763	-	99	44.691	Callithrix_jacchus
ENSLACG00000010650	-	99	50.181	ENSCAFG00000007505	TDRD12	81	54.839	Canis_familiaris
ENSLACG00000010650	-	99	50.181	ENSCAFG00020019790	-	90	50.181	Canis_lupus_dingo
ENSLACG00000010650	-	99	50.589	ENSTSYG00000012034	-	99	46.500	Carlito_syrichta
ENSLACG00000010650	-	93	53.125	ENSCPOG00000002876	-	98	38.329	Cavia_porcellus
ENSLACG00000010650	-	99	47.373	ENSCCAG00000037592	-	92	47.373	Cebus_capucinus
ENSLACG00000010650	-	99	46.286	ENSCATG00000038627	-	92	46.286	Cercocebus_atys
ENSLACG00000010650	-	99	49.595	ENSCLAG00000012138	-	85	49.505	Chinchilla_lanigera
ENSLACG00000010650	-	99	50.406	ENSCSAG00000004794	-	92	50.090	Chlorocebus_sabaeus
ENSLACG00000010650	-	52	65.385	ENSCHOG00000009768	-	55	65.385	Choloepus_hoffmanni
ENSLACG00000010650	-	87	61.472	ENSCPBG00000000147	-	92	61.472	Chrysemys_picta_bellii
ENSLACG00000010650	-	99	49.051	ENSCANG00000040785	-	99	44.938	Colobus_angolensis_palliatus
ENSLACG00000010650	-	99	43.085	ENSCGRG00001021407	-	99	41.253	Cricetulus_griseus_chok1gshd
ENSLACG00000010650	-	99	41.771	ENSCGRG00000007286	-	82	41.496	Cricetulus_griseus_crigri
ENSLACG00000010650	-	87	41.447	ENSCSEG00000001744	-	73	42.798	Cynoglossus_semilaevis
ENSLACG00000010650	-	61	43.294	ENSCVAG00000004277	tdrd12	90	43.294	Cyprinodon_variegatus
ENSLACG00000010650	-	85	49.241	ENSDARG00000075217	tdrd12	68	49.241	Danio_rerio
ENSLACG00000010650	-	99	51.266	ENSDNOG00000017244	-	83	51.266	Dasypus_novemcinctus
ENSLACG00000010650	-	91	55.229	ENSDORG00000012134	-	79	57.635	Dipodomys_ordii
ENSLACG00000010650	-	57	50.980	ENSETEG00000015088	-	68	50.980	Echinops_telfairi
ENSLACG00000010650	-	99	49.684	ENSEASG00005021053	-	80	56.250	Equus_asinus_asinus
ENSLACG00000010650	-	91	56.000	ENSEEUG00000008457	-	91	56.000	Erinaceus_europaeus
ENSLACG00000010650	-	87	49.449	ENSELUG00000017494	tdrd12	76	47.464	Esox_lucius
ENSLACG00000010650	-	81	50.485	ENSFALG00000000259	-	71	50.485	Ficedula_albicollis
ENSLACG00000010650	-	99	43.592	ENSFDAG00000014797	-	99	37.251	Fukomys_damarensis
ENSLACG00000010650	-	71	36.717	ENSFHEG00000002884	-	56	45.812	Fundulus_heteroclitus
ENSLACG00000010650	-	87	46.125	ENSGALG00000004704	-	78	46.125	Gallus_gallus
ENSLACG00000010650	-	84	44.276	ENSGAFG00000003729	tdrd12	68	44.276	Gambusia_affinis
ENSLACG00000010650	-	91	61.616	ENSGAGG00000000247	-	93	61.616	Gopherus_agassizii
ENSLACG00000010650	-	99	50.497	ENSGGOG00000011938	-	99	45.185	Gorilla_gorilla
ENSLACG00000010650	-	79	46.224	ENSHBUG00000020426	tdrd12	87	46.224	Haplochromis_burtoni
ENSLACG00000010650	-	85	52.866	ENSHGLG00000015608	-	99	40.523	Heterocephalus_glaber_female
ENSLACG00000010650	-	97	49.862	ENSHGLG00100008227	-	97	49.403	Heterocephalus_glaber_male
ENSLACG00000010650	-	85	45.442	ENSIPUG00000016825	tdrd12	70	45.442	Ictalurus_punctatus
ENSLACG00000010650	-	92	54.140	ENSSTOG00000013638	-	97	43.243	Ictidomys_tridecemlineatus
ENSLACG00000010650	-	66	45.205	ENSKMAG00000008031	tdrd12	84	45.205	Kryptolebias_marmoratus
ENSLACG00000010650	-	81	43.840	ENSLBEG00000005601	tdrd12	87	43.840	Labrus_bergylta
ENSLACG00000010650	-	85	51.210	ENSLOCG00000001690	tdrd12	68	51.210	Lepisosteus_oculatus
ENSLACG00000010650	-	99	50.993	ENSLAFG00000008698	-	99	50.993	Loxodonta_africana
ENSLACG00000010650	-	99	50.949	ENSMFAG00000044756	-	99	45.679	Macaca_fascicularis
ENSLACG00000010650	-	99	50.858	ENSMMUG00000015608	-	99	45.432	Macaca_mulatta
ENSLACG00000010650	-	99	50.817	ENSMNEG00000043067	-	99	45.250	Macaca_nemestrina
ENSLACG00000010650	-	99	45.958	ENSMLEG00000042036	-	99	45.000	Mandrillus_leucophaeus
ENSLACG00000010650	-	83	44.059	ENSMAMG00000013867	tdrd12	87	44.077	Mastacembelus_armatus
ENSLACG00000010650	-	79	45.921	ENSMZEG00005024214	tdrd12	87	45.921	Maylandia_zebra
ENSLACG00000010650	-	62	53.441	ENSMGAG00000005627	-	99	53.441	Meleagris_gallopavo
ENSLACG00000010650	-	92	54.259	ENSMAUG00000013767	-	82	54.259	Mesocricetus_auratus
ENSLACG00000010650	-	99	50.000	ENSMICG00000003623	-	99	45.074	Microcebus_murinus
ENSLACG00000010650	-	99	49.458	ENSMOCG00000002366	-	99	49.546	Microtus_ochrogaster
ENSLACG00000010650	-	84	44.737	ENSMMOG00000018662	tdrd12	91	44.737	Mola_mola
ENSLACG00000010650	-	97	52.788	ENSMODG00000012286	-	79	52.166	Monodelphis_domestica
ENSLACG00000010650	-	84	43.310	ENSMALG00000006918	tdrd12	78	44.944	Monopterus_albus
ENSLACG00000010650	-	99	50.899	MGP_CAROLIEiJ_G0029587	-	97	56.311	Mus_caroli
ENSLACG00000010650	-	99	50.721	MGP_PahariEiJ_G0012821	-	97	55.825	Mus_pahari
ENSLACG00000010650	-	99	50.270	MGP_SPRETEiJ_G0030686	-	97	55.340	Mus_spretus
ENSLACG00000010650	-	99	50.860	ENSMPUG00000007791	-	83	50.860	Mustela_putorius_furo
ENSLACG00000010650	-	99	43.333	ENSMLUG00000010694	-	99	43.333	Myotis_lucifugus
ENSLACG00000010650	-	99	44.723	ENSNGAG00000000793	-	97	40.712	Nannospalax_galili
ENSLACG00000010650	-	60	45.468	ENSNBRG00000017878	-	92	45.468	Neolamprologus_brichardi
ENSLACG00000010650	-	99	47.632	ENSNLEG00000007635	-	91	47.632	Nomascus_leucogenys
ENSLACG00000010650	-	58	60.377	ENSMEUG00000014059	-	58	60.377	Notamacropus_eugenii
ENSLACG00000010650	-	81	56.709	ENSOPRG00000015809	-	80	56.709	Ochotona_princeps
ENSLACG00000010650	-	94	50.915	ENSODEG00000014443	-	95	40.000	Octodon_degus
ENSLACG00000010650	-	84	45.631	ENSONIG00000010630	tdrd12	86	45.631	Oreochromis_niloticus
ENSLACG00000010650	-	54	48.235	ENSOANG00000029442	-	82	59.259	Ornithorhynchus_anatinus
ENSLACG00000010650	-	99	41.844	ENSOCUG00000016911	-	82	41.844	Oryctolagus_cuniculus
ENSLACG00000010650	-	81	43.521	ENSORLG00000027859	tdrd12	76	43.521	Oryzias_latipes
ENSLACG00000010650	-	84	44.660	ENSORLG00015020835	tdrd12	66	44.660	Oryzias_latipes_hsok
ENSLACG00000010650	-	84	42.382	ENSOMEG00000021862	tdrd12	89	42.382	Oryzias_melastigma
ENSLACG00000010650	-	99	49.410	ENSOGAG00000001571	-	98	49.319	Otolemur_garnettii
ENSLACG00000010650	-	99	50.588	ENSOARG00000004254	-	83	49.955	Ovis_aries
ENSLACG00000010650	-	99	49.274	ENSPPAG00000042284	-	99	44.581	Pan_paniscus
ENSLACG00000010650	-	99	50.000	ENSPPRG00000002389	-	94	49.864	Panthera_pardus
ENSLACG00000010650	-	99	48.867	ENSPTRG00000010795	TDRD12	92	48.867	Pan_troglodytes
ENSLACG00000010650	-	99	50.587	ENSPANG00000001203	-	99	45.185	Papio_anubis
ENSLACG00000010650	-	85	47.951	ENSPKIG00000006407	tdrd12	66	47.951	Paramormyrops_kingsleyae
ENSLACG00000010650	-	99	44.581	ENSPSIG00000012970	-	100	56.863	Pelodiscus_sinensis
ENSLACG00000010650	-	84	43.593	ENSPMGG00000022691	tdrd12	92	43.593	Periophthalmus_magnuspinnatus
ENSLACG00000010650	-	99	50.904	ENSPEMG00000009233	-	96	50.904	Peromyscus_maniculatus_bairdii
ENSLACG00000010650	-	99	51.398	ENSPCIG00000020993	-	77	55.601	Phascolarctos_cinereus
ENSLACG00000010650	-	83	44.186	ENSPFOG00000008184	tdrd12	68	44.186	Poecilia_formosa
ENSLACG00000010650	-	62	45.021	ENSPMEG00000006420	tdrd12	89	45.021	Poecilia_mexicana
ENSLACG00000010650	-	74	44.832	ENSPREG00000004916	tdrd12	74	44.832	Poecilia_reticulata
ENSLACG00000010650	-	99	50.858	ENSPPYG00000009821	-	91	50.858	Pongo_abelii
ENSLACG00000010650	-	69	54.150	ENSPCAG00000013510	-	68	54.150	Procavia_capensis
ENSLACG00000010650	-	99	47.606	ENSPCOG00000023600	-	99	41.872	Propithecus_coquereli
ENSLACG00000010650	-	93	60.622	ENSPVAG00000014599	-	93	60.622	Pteropus_vampyrus
ENSLACG00000010650	-	79	46.224	ENSPNYG00000022866	tdrd12	85	46.224	Pundamilia_nyererei
ENSLACG00000010650	-	81	48.844	ENSPNAG00000003413	tdrd12	86	48.844	Pygocentrus_nattereri
ENSLACG00000010650	-	99	50.625	ENSRNOG00000012719	Tdrd12	83	51.083	Rattus_norvegicus
ENSLACG00000010650	-	99	47.435	ENSRBIG00000019899	-	92	47.435	Rhinopithecus_bieti
ENSLACG00000010650	-	99	50.497	ENSRROG00000036351	-	99	45.185	Rhinopithecus_roxellana
ENSLACG00000010650	-	99	50.362	ENSSBOG00000034916	-	99	44.444	Saimiri_boliviensis_boliviensis
ENSLACG00000010650	-	99	51.075	ENSSHAG00000002599	-	87	56.671	Sarcophilus_harrisii
ENSLACG00000010650	-	78	47.023	ENSSFOG00015000297	tdrd12	79	47.023	Scleropages_formosus
ENSLACG00000010650	-	85	45.590	ENSSMAG00000002870	tdrd12	90	45.590	Scophthalmus_maximus
ENSLACG00000010650	-	81	46.889	ENSSDUG00000017304	tdrd12	88	46.889	Seriola_dumerili
ENSLACG00000010650	-	81	46.889	ENSSLDG00000004415	tdrd12	88	46.889	Seriola_lalandi_dorsalis
ENSLACG00000010650	-	99	46.552	ENSSARG00000005357	-	99	46.552	Sorex_araneus
ENSLACG00000010650	-	88	57.597	ENSSPUG00000013174	-	90	57.597	Sphenodon_punctatus
ENSLACG00000010650	-	77	45.614	ENSSPAG00000005706	tdrd12	71	54.545	Stegastes_partitus
ENSLACG00000010650	-	85	49.319	ENSSSCG00000002857	-	92	50.105	Sus_scrofa
ENSLACG00000010650	-	59	49.849	ENSTGUG00000009121	-	100	49.849	Taeniopygia_guttata
ENSLACG00000010650	-	83	39.000	ENSTRUG00000021888	tdrd12	94	39.000	Takifugu_rubripes
ENSLACG00000010650	-	75	58.219	ENSTBEG00000007609	-	75	58.219	Tupaia_belangeri
ENSLACG00000010650	-	99	49.773	ENSTTRG00000012206	-	98	49.682	Tursiops_truncatus
ENSLACG00000010650	-	99	49.318	ENSUAMG00000007298	-	91	49.318	Ursus_americanus
ENSLACG00000010650	-	99	49.410	ENSUMAG00000014314	-	91	49.410	Ursus_maritimus
ENSLACG00000010650	-	95	45.369	ENSVPAG00000012051	-	100	45.274	Vicugna_pacos
ENSLACG00000010650	-	99	50.588	ENSVVUG00000016637	-	87	50.588	Vulpes_vulpes
ENSLACG00000010650	-	57	44.898	ENSXETG00000031945	-	74	44.898	Xenopus_tropicalis
ENSLACG00000010650	-	83	44.972	ENSXMAG00000020908	tdrd12	92	44.972	Xiphophorus_maculatus