EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010689 (Gene tree)
Gene ID: 102365180
Gene Symbol: YRDC
Alias: FLJ23476|IRIP|SUA5
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 10942 bases
Position: chrJH128037.1:526101-537042
Accession: 102365180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012144	Sua5_yciO_yrdC	PF01300.18	1.5e-45	1	1
ENSLACP00000012143	Sua5_yciO_yrdC	PF01300.18	3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012236	YRDC-202	651	-	ENSLACP00000012144	217 (aa)	-	H3AR73
ENSLACT00000012235	YRDC-201	4570	XM_006007124	ENSLACP00000012143	277 (aa)	XP_006007186	H3AR72

Gene Model

Click here to download ENSLACG00000010689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010689	YRDC	88	35.610	ENSLACG00000017624	si:ch211-153b23.3	65	34.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010689	YRDC	99	66.204	ENSG00000196449	YRDC	84	61.570	Homo_sapiens
ENSLACG00000010689	YRDC	94	66.667	ENSAPOG00000024293	yrdc	97	57.836	Acanthochromis_polyacanthus
ENSLACG00000010689	YRDC	87	66.489	ENSAMEG00000001173	YRDC	99	66.845	Ailuropoda_melanoleuca
ENSLACG00000010689	YRDC	94	68.137	ENSACIG00000017330	yrdc	97	57.509	Amphilophus_citrinellus
ENSLACG00000010689	YRDC	94	67.157	ENSAOCG00000021647	yrdc	97	56.877	Amphiprion_ocellaris
ENSLACG00000010689	YRDC	94	67.157	ENSAPEG00000006164	yrdc	97	56.618	Amphiprion_percula
ENSLACG00000010689	YRDC	94	70.098	ENSATEG00000010086	yrdc	95	60.000	Anabas_testudineus
ENSLACG00000010689	YRDC	89	61.856	ENSACAG00000017203	YRDC	94	61.809	Anolis_carolinensis
ENSLACG00000010689	YRDC	99	65.116	ENSANAG00000028788	-	91	65.116	Aotus_nancymaae
ENSLACG00000010689	YRDC	99	61.927	ENSANAG00000031052	-	85	57.787	Aotus_nancymaae
ENSLACG00000010689	YRDC	95	65.217	ENSACLG00000027775	yrdc	75	66.176	Astatotilapia_calliptera
ENSLACG00000010689	YRDC	94	65.854	ENSAMXG00000037791	yrdc	99	56.349	Astyanax_mexicanus
ENSLACG00000010689	YRDC	98	65.728	ENSBTAG00000006510	YRDC	84	62.083	Bos_taurus
ENSLACG00000010689	YRDC	93	37.255	WBGene00012997	Y48C3A.18	94	35.294	Caenorhabditis_elegans
ENSLACG00000010689	YRDC	99	65.741	ENSCJAG00000002078	YRDC	64	61.157	Callithrix_jacchus
ENSLACG00000010689	YRDC	99	65.116	ENSCAFG00000003253	YRDC	84	61.250	Canis_familiaris
ENSLACG00000010689	YRDC	99	65.116	ENSCAFG00020007843	YRDC	84	61.250	Canis_lupus_dingo
ENSLACG00000010689	YRDC	98	65.728	ENSCHIG00000007882	YRDC	84	61.250	Capra_hircus
ENSLACG00000010689	YRDC	79	69.006	ENSTSYG00000005555	YRDC	61	69.006	Carlito_syrichta
ENSLACG00000010689	YRDC	96	66.029	ENSCPOG00000036144	YRDC	82	61.345	Cavia_porcellus
ENSLACG00000010689	YRDC	99	65.741	ENSCCAG00000028891	YRDC	84	61.157	Cebus_capucinus
ENSLACG00000010689	YRDC	99	65.278	ENSCATG00000036928	YRDC	84	60.744	Cercocebus_atys
ENSLACG00000010689	YRDC	96	64.115	ENSCLAG00000015012	YRDC	83	59.583	Chinchilla_lanigera
ENSLACG00000010689	YRDC	99	65.278	ENSCSAG00000001116	YRDC	84	60.744	Chlorocebus_sabaeus
ENSLACG00000010689	YRDC	67	63.448	ENSCHOG00000005500	YRDC	79	57.471	Choloepus_hoffmanni
ENSLACG00000010689	YRDC	95	68.932	ENSCPBG00000018446	YRDC	89	68.421	Chrysemys_picta_bellii
ENSLACG00000010689	YRDC	95	46.759	ENSCING00000007564	-	99	46.759	Ciona_intestinalis
ENSLACG00000010689	YRDC	95	48.131	ENSCSAVG00000009982	-	99	48.131	Ciona_savignyi
ENSLACG00000010689	YRDC	99	65.741	ENSCANG00000031111	YRDC	84	61.157	Colobus_angolensis_palliatus
ENSLACG00000010689	YRDC	99	60.000	ENSCGRG00001000829	-	58	60.000	Cricetulus_griseus_chok1gshd
ENSLACG00000010689	YRDC	99	65.116	ENSCGRG00001014496	-	82	60.924	Cricetulus_griseus_chok1gshd
ENSLACG00000010689	YRDC	59	69.531	ENSCGRG00000001307	-	98	69.531	Cricetulus_griseus_crigri
ENSLACG00000010689	YRDC	94	66.176	ENSCSEG00000019075	yrdc	94	56.107	Cynoglossus_semilaevis
ENSLACG00000010689	YRDC	94	64.216	ENSCVAG00000017355	yrdc	98	54.182	Cyprinodon_variegatus
ENSLACG00000010689	YRDC	96	66.827	ENSDARG00000041428	yrdc	97	59.836	Danio_rerio
ENSLACG00000010689	YRDC	90	50.000	ENSDNOG00000036198	-	96	50.000	Dasypus_novemcinctus
ENSLACG00000010689	YRDC	96	64.115	ENSDNOG00000038789	-	90	56.846	Dasypus_novemcinctus
ENSLACG00000010689	YRDC	90	67.857	ENSDORG00000008788	Yrdc	86	67.857	Dipodomys_ordii
ENSLACG00000010689	YRDC	91	48.756	FBgn0061361	CG33786	80	48.756	Drosophila_melanogaster
ENSLACG00000010689	YRDC	96	50.239	ENSETEG00000003442	YRDC	82	47.479	Echinops_telfairi
ENSLACG00000010689	YRDC	96	52.632	ENSEBUG00000014080	yrdc	92	49.351	Eptatretus_burgeri
ENSLACG00000010689	YRDC	99	65.116	ENSEASG00005012253	YRDC	76	65.116	Equus_asinus_asinus
ENSLACG00000010689	YRDC	99	65.116	ENSECAG00000022522	YRDC	83	60.996	Equus_caballus
ENSLACG00000010689	YRDC	94	65.196	ENSELUG00000018071	yrdc	78	60.246	Esox_lucius
ENSLACG00000010689	YRDC	99	63.721	ENSFCAG00000011018	YRDC	83	59.751	Felis_catus
ENSLACG00000010689	YRDC	88	72.105	ENSFALG00000000964	YRDC	89	70.918	Ficedula_albicollis
ENSLACG00000010689	YRDC	96	63.942	ENSFHEG00000001029	yrdc	98	55.642	Fundulus_heteroclitus
ENSLACG00000010689	YRDC	94	66.176	ENSGMOG00000015635	yrdc	97	66.176	Gadus_morhua
ENSLACG00000010689	YRDC	96	69.378	ENSGALG00000029001	YRDC	82	69.048	Gallus_gallus
ENSLACG00000010689	YRDC	94	64.216	ENSGAFG00000008396	yrdc	98	54.348	Gambusia_affinis
ENSLACG00000010689	YRDC	98	63.721	ENSGACG00000013878	yrdc	97	58.848	Gasterosteus_aculeatus
ENSLACG00000010689	YRDC	95	70.388	ENSGAGG00000014968	YRDC	90	69.856	Gopherus_agassizii
ENSLACG00000010689	YRDC	99	66.204	ENSGGOG00000007619	YRDC	84	61.570	Gorilla_gorilla
ENSLACG00000010689	YRDC	95	66.184	ENSHBUG00000009298	yrdc	75	67.157	Haplochromis_burtoni
ENSLACG00000010689	YRDC	99	64.651	ENSHGLG00000014075	YRDC	89	57.854	Heterocephalus_glaber_female
ENSLACG00000010689	YRDC	96	65.072	ENSHGLG00100002734	YRDC	75	65.072	Heterocephalus_glaber_male
ENSLACG00000010689	YRDC	93	64.179	ENSHCOG00000006598	yrdc	92	55.466	Hippocampus_comes
ENSLACG00000010689	YRDC	96	68.421	ENSIPUG00000014985	yrdc	98	61.290	Ictalurus_punctatus
ENSLACG00000010689	YRDC	100	64.055	ENSSTOG00000001643	YRDC	83	60.166	Ictidomys_tridecemlineatus
ENSLACG00000010689	YRDC	94	67.157	ENSKMAG00000013468	yrdc	76	66.346	Kryptolebias_marmoratus
ENSLACG00000010689	YRDC	94	68.137	ENSLBEG00000027501	yrdc	97	57.299	Labrus_bergylta
ENSLACG00000010689	YRDC	99	71.296	ENSLOCG00000003321	yrdc	98	67.347	Lepisosteus_oculatus
ENSLACG00000010689	YRDC	95	65.700	ENSLAFG00000017556	YRDC	88	58.301	Loxodonta_africana
ENSLACG00000010689	YRDC	98	65.566	ENSMFAG00000003487	YRDC	99	65.566	Macaca_fascicularis
ENSLACG00000010689	YRDC	99	65.278	ENSMMUG00000005372	YRDC	62	60.744	Macaca_mulatta
ENSLACG00000010689	YRDC	99	65.278	ENSMNEG00000029348	YRDC	84	60.744	Macaca_nemestrina
ENSLACG00000010689	YRDC	70	70.861	ENSMLEG00000041122	YRDC	99	70.861	Mandrillus_leucophaeus
ENSLACG00000010689	YRDC	96	63.462	ENSMAMG00000007315	yrdc	96	54.511	Mastacembelus_armatus
ENSLACG00000010689	YRDC	95	65.217	ENSMZEG00005006948	yrdc	75	66.176	Maylandia_zebra
ENSLACG00000010689	YRDC	92	71.500	ENSMGAG00000002833	YRDC	99	70.936	Meleagris_gallopavo
ENSLACG00000010689	YRDC	99	66.047	ENSMICG00000031688	YRDC	83	61.826	Microcebus_murinus
ENSLACG00000010689	YRDC	66	64.336	ENSMOCG00000000164	-	64	57.471	Microtus_ochrogaster
ENSLACG00000010689	YRDC	94	65.196	ENSMMOG00000002119	yrdc	93	56.439	Mola_mola
ENSLACG00000010689	YRDC	98	65.094	ENSMODG00000017750	YRDC	75	65.238	Monodelphis_domestica
ENSLACG00000010689	YRDC	95	67.476	ENSMALG00000012471	yrdc	96	57.249	Monopterus_albus
ENSLACG00000010689	YRDC	88	66.316	MGP_CAROLIEiJ_G0026453	Yrdc	98	73.786	Mus_caroli
ENSLACG00000010689	YRDC	95	64.734	ENSMUSG00000028889	Yrdc	100	73.333	Mus_musculus
ENSLACG00000010689	YRDC	95	64.251	MGP_PahariEiJ_G0028784	Yrdc	100	73.333	Mus_pahari
ENSLACG00000010689	YRDC	95	64.734	MGP_SPRETEiJ_G0027432	Yrdc	74	64.734	Mus_spretus
ENSLACG00000010689	YRDC	98	63.679	ENSMPUG00000014542	YRDC	89	62.389	Mustela_putorius_furo
ENSLACG00000010689	YRDC	90	61.224	ENSMLUG00000024310	-	97	61.421	Myotis_lucifugus
ENSLACG00000010689	YRDC	96	64.593	ENSMLUG00000000955	-	83	59.583	Myotis_lucifugus
ENSLACG00000010689	YRDC	94	54.146	ENSMLUG00000028796	-	77	52.968	Myotis_lucifugus
ENSLACG00000010689	YRDC	96	65.550	ENSNGAG00000019099	Yrdc	75	65.550	Nannospalax_galili
ENSLACG00000010689	YRDC	94	66.667	ENSNBRG00000009475	yrdc	77	66.346	Neolamprologus_brichardi
ENSLACG00000010689	YRDC	99	66.047	ENSNLEG00000011665	YRDC	84	61.570	Nomascus_leucogenys
ENSLACG00000010689	YRDC	94	66.829	ENSMEUG00000005068	YRDC	95	66.829	Notamacropus_eugenii
ENSLACG00000010689	YRDC	99	63.721	ENSODEG00000007401	YRDC	100	73.333	Octodon_degus
ENSLACG00000010689	YRDC	94	66.176	ENSONIG00000016213	yrdc	86	65.865	Oreochromis_niloticus
ENSLACG00000010689	YRDC	54	61.538	ENSOANG00000002048	-	91	61.538	Ornithorhynchus_anatinus
ENSLACG00000010689	YRDC	99	65.581	ENSOCUG00000005384	YRDC	78	61.603	Oryctolagus_cuniculus
ENSLACG00000010689	YRDC	94	65.196	ENSORLG00000014393	yrdc	91	57.371	Oryzias_latipes
ENSLACG00000010689	YRDC	94	64.706	ENSORLG00020019663	yrdc	91	56.972	Oryzias_latipes_hni
ENSLACG00000010689	YRDC	94	64.039	ENSORLG00015004625	yrdc	91	56.175	Oryzias_latipes_hsok
ENSLACG00000010689	YRDC	94	64.706	ENSOMEG00000018550	yrdc	90	57.258	Oryzias_melastigma
ENSLACG00000010689	YRDC	98	64.789	ENSOGAG00000030474	YRDC	84	59.751	Otolemur_garnettii
ENSLACG00000010689	YRDC	98	65.728	ENSOARG00000019873	YRDC	83	61.250	Ovis_aries
ENSLACG00000010689	YRDC	69	71.812	ENSPPAG00000039722	-	99	71.812	Pan_paniscus
ENSLACG00000010689	YRDC	99	64.186	ENSPPRG00000007752	YRDC	83	60.166	Panthera_pardus
ENSLACG00000010689	YRDC	72	67.516	ENSPTIG00000019821	YRDC	67	67.516	Panthera_tigris_altaica
ENSLACG00000010689	YRDC	99	66.204	ENSPTRG00000000557	YRDC	84	61.157	Pan_troglodytes
ENSLACG00000010689	YRDC	99	65.278	ENSPANG00000006487	YRDC	63	60.744	Papio_anubis
ENSLACG00000010689	YRDC	99	63.426	ENSPKIG00000004574	yrdc	86	60.000	Paramormyrops_kingsleyae
ENSLACG00000010689	YRDC	95	68.599	ENSPSIG00000006483	YRDC	73	68.599	Pelodiscus_sinensis
ENSLACG00000010689	YRDC	96	64.423	ENSPMGG00000004184	yrdc	95	57.422	Periophthalmus_magnuspinnatus
ENSLACG00000010689	YRDC	80	68.786	ENSPEMG00000016985	Yrdc	76	68.786	Peromyscus_maniculatus_bairdii
ENSLACG00000010689	YRDC	81	56.497	ENSPMAG00000002905	yrdc	96	56.497	Petromyzon_marinus
ENSLACG00000010689	YRDC	98	65.094	ENSPCIG00000025731	YRDC	76	65.094	Phascolarctos_cinereus
ENSLACG00000010689	YRDC	94	64.706	ENSPFOG00000023097	yrdc	99	54.839	Poecilia_formosa
ENSLACG00000010689	YRDC	94	64.216	ENSPLAG00000020882	yrdc	99	54.480	Poecilia_latipinna
ENSLACG00000010689	YRDC	94	64.706	ENSPMEG00000013237	yrdc	99	54.839	Poecilia_mexicana
ENSLACG00000010689	YRDC	94	63.725	ENSPREG00000005285	yrdc	98	54.182	Poecilia_reticulata
ENSLACG00000010689	YRDC	99	66.355	ENSPPYG00000001523	-	95	62.931	Pongo_abelii
ENSLACG00000010689	YRDC	96	64.115	ENSPCAG00000016850	YRDC	83	59.336	Procavia_capensis
ENSLACG00000010689	YRDC	99	66.047	ENSPCOG00000013214	YRDC	83	61.826	Propithecus_coquereli
ENSLACG00000010689	YRDC	97	63.981	ENSPVAG00000010147	YRDC	83	59.336	Pteropus_vampyrus
ENSLACG00000010689	YRDC	95	65.700	ENSPNYG00000013956	yrdc	75	66.667	Pundamilia_nyererei
ENSLACG00000010689	YRDC	87	68.085	ENSPNAG00000015625	yrdc	96	58.025	Pygocentrus_nattereri
ENSLACG00000010689	YRDC	95	64.734	ENSRNOG00000025424	Yrdc	74	64.734	Rattus_norvegicus
ENSLACG00000010689	YRDC	99	65.741	ENSRBIG00000032289	YRDC	84	61.157	Rhinopithecus_bieti
ENSLACG00000010689	YRDC	97	66.190	ENSRROG00000039370	YRDC	71	66.190	Rhinopithecus_roxellana
ENSLACG00000010689	YRDC	96	65.865	ENSSBOG00000018937	YRDC	97	60.965	Saimiri_boliviensis_boliviensis
ENSLACG00000010689	YRDC	67	73.103	ENSSHAG00000013957	-	98	73.103	Sarcophilus_harrisii
ENSLACG00000010689	YRDC	96	65.865	ENSSFOG00015006128	yrdc	89	65.865	Scleropages_formosus
ENSLACG00000010689	YRDC	94	66.667	ENSSMAG00000005195	yrdc	78	65.865	Scophthalmus_maximus
ENSLACG00000010689	YRDC	59	33.094	ENSSDUG00000006631	-	64	32.847	Seriola_dumerili
ENSLACG00000010689	YRDC	65	32.051	ENSSDUG00000006736	-	89	30.899	Seriola_dumerili
ENSLACG00000010689	YRDC	95	68.116	ENSSDUG00000009775	yrdc	77	68.269	Seriola_dumerili
ENSLACG00000010689	YRDC	95	68.116	ENSSLDG00000003196	yrdc	77	68.269	Seriola_lalandi_dorsalis
ENSLACG00000010689	YRDC	59	31.343	ENSSLDG00000008694	-	63	32.847	Seriola_lalandi_dorsalis
ENSLACG00000010689	YRDC	96	70.192	ENSSPUG00000003946	YRDC	81	70.192	Sphenodon_punctatus
ENSLACG00000010689	YRDC	94	66.667	ENSSPAG00000012559	yrdc	97	56.343	Stegastes_partitus
ENSLACG00000010689	YRDC	100	64.977	ENSSSCG00000040425	YRDC	83	60.833	Sus_scrofa
ENSLACG00000010689	YRDC	66	74.825	ENSTGUG00000001507	YRDC	99	73.973	Taeniopygia_guttata
ENSLACG00000010689	YRDC	94	62.927	ENSTRUG00000005923	yrdc	89	56.000	Takifugu_rubripes
ENSLACG00000010689	YRDC	69	68.000	ENSTBEG00000008863	YRDC	96	68.000	Tupaia_belangeri
ENSLACG00000010689	YRDC	65	73.239	ENSTTRG00000013538	-	95	73.239	Tursiops_truncatus
ENSLACG00000010689	YRDC	94	66.176	ENSUAMG00000006150	YRDC	100	66.502	Ursus_americanus
ENSLACG00000010689	YRDC	96	52.153	ENSVPAG00000006642	YRDC	97	49.160	Vicugna_pacos
ENSLACG00000010689	YRDC	70	70.861	ENSVVUG00000023132	-	50	70.861	Vulpes_vulpes
ENSLACG00000010689	YRDC	95	72.464	ENSXETG00000014420	yrdc	97	66.529	Xenopus_tropicalis
ENSLACG00000010689	YRDC	94	64.216	ENSXCOG00000000829	yrdc	86	63.462	Xiphophorus_couchianus
ENSLACG00000010689	YRDC	94	63.235	ENSXMAG00000014606	yrdc	94	52.688	Xiphophorus_maculatus