EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010782 (Gene tree)
Gene ID: 102357288
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 21226 bases
Position: chrJH127893.1:534598-555823
Accession: 102357288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012250	RNase_H2-Ydr279	PF09468.10	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012342	RNASEH2B-201	907	XM_006006335	ENSLACP00000012250	248 (aa)	XP_006006397	H3ARH9

Gene Model

Click here to download ENSLACG00000010782's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010782	RNASEH2B	90	61.883	ENSG00000136104	RNASEH2B	86	62.727	Homo_sapiens
ENSLACG00000010782	RNASEH2B	92	62.281	ENSAPOG00000010496	rnaseh2b	68	62.264	Acanthochromis_polyacanthus
ENSLACG00000010782	RNASEH2B	90	61.161	ENSAMEG00000012040	RNASEH2B	72	60.377	Ailuropoda_melanoleuca
ENSLACG00000010782	RNASEH2B	92	57.205	ENSACIG00000021991	rnaseh2b	89	57.447	Amphilophus_citrinellus
ENSLACG00000010782	RNASEH2B	92	60.526	ENSAOCG00000013398	rnaseh2b	68	60.377	Amphiprion_ocellaris
ENSLACG00000010782	RNASEH2B	92	60.526	ENSAPEG00000006033	rnaseh2b	68	60.377	Amphiprion_percula
ENSLACG00000010782	RNASEH2B	92	64.035	ENSATEG00000008370	rnaseh2b	68	64.151	Anabas_testudineus
ENSLACG00000010782	RNASEH2B	85	64.151	ENSAPLG00000008955	RNASEH2B	77	64.151	Anas_platyrhynchos
ENSLACG00000010782	RNASEH2B	92	61.739	ENSACAG00000011679	RNASEH2B	77	61.739	Anolis_carolinensis
ENSLACG00000010782	RNASEH2B	91	60.965	ENSANAG00000020662	RNASEH2B	74	57.927	Aotus_nancymaae
ENSLACG00000010782	RNASEH2B	92	61.404	ENSACLG00000000467	rnaseh2b	68	61.321	Astatotilapia_calliptera
ENSLACG00000010782	RNASEH2B	91	61.947	ENSAMXG00000014351	rnaseh2b	68	62.085	Astyanax_mexicanus
ENSLACG00000010782	RNASEH2B	90	56.889	ENSBTAG00000020149	RNASEH2B	69	56.542	Bos_taurus
ENSLACG00000010782	RNASEH2B	67	56.287	ENSCJAG00000003822	-	62	56.287	Callithrix_jacchus
ENSLACG00000010782	RNASEH2B	89	61.086	ENSCJAG00000008585	-	69	61.137	Callithrix_jacchus
ENSLACG00000010782	RNASEH2B	90	57.848	ENSCAFG00000004295	RNASEH2B	72	57.848	Canis_familiaris
ENSLACG00000010782	RNASEH2B	90	57.848	ENSCAFG00020000250	RNASEH2B	72	57.848	Canis_lupus_dingo
ENSLACG00000010782	RNASEH2B	90	50.901	ENSCHIG00000012982	-	73	50.237	Capra_hircus
ENSLACG00000010782	RNASEH2B	90	57.658	ENSCHIG00000018220	RNASEH2B	68	57.346	Capra_hircus
ENSLACG00000010782	RNASEH2B	90	59.641	ENSTSYG00000009176	-	68	59.242	Carlito_syrichta
ENSLACG00000010782	RNASEH2B	90	50.901	ENSTSYG00000031177	-	66	50.237	Carlito_syrichta
ENSLACG00000010782	RNASEH2B	80	57.789	ENSCAPG00000009978	RNASEH2B	69	54.500	Cavia_aperea
ENSLACG00000010782	RNASEH2B	90	57.589	ENSCPOG00000032527	RNASEH2B	68	57.075	Cavia_porcellus
ENSLACG00000010782	RNASEH2B	90	61.435	ENSCCAG00000026979	RNASEH2B	69	61.137	Cebus_capucinus
ENSLACG00000010782	RNASEH2B	87	60.648	ENSCATG00000031336	RNASEH2B	66	61.137	Cercocebus_atys
ENSLACG00000010782	RNASEH2B	90	59.641	ENSCLAG00000003517	RNASEH2B	58	59.242	Chinchilla_lanigera
ENSLACG00000010782	RNASEH2B	99	55.870	ENSCSAG00000017701	RNASEH2B	64	60.377	Chlorocebus_sabaeus
ENSLACG00000010782	RNASEH2B	91	51.982	ENSCHOG00000013688	RNASEH2B	69	51.887	Choloepus_hoffmanni
ENSLACG00000010782	RNASEH2B	91	66.079	ENSCPBG00000008684	RNASEH2B	68	66.667	Chrysemys_picta_bellii
ENSLACG00000010782	RNASEH2B	90	36.481	ENSCING00000016454	-	68	35.135	Ciona_intestinalis
ENSLACG00000010782	RNASEH2B	90	60.714	ENSCANG00000041511	-	68	60.377	Colobus_angolensis_palliatus
ENSLACG00000010782	RNASEH2B	92	59.471	ENSCGRG00001000611	Rnaseh2b	73	59.471	Cricetulus_griseus_chok1gshd
ENSLACG00000010782	RNASEH2B	92	59.471	ENSCGRG00000006077	Rnaseh2b	73	59.471	Cricetulus_griseus_crigri
ENSLACG00000010782	RNASEH2B	92	61.404	ENSCSEG00000004910	rnaseh2b	74	61.792	Cynoglossus_semilaevis
ENSLACG00000010782	RNASEH2B	92	58.772	ENSCVAG00000005212	rnaseh2b	68	58.491	Cyprinodon_variegatus
ENSLACG00000010782	RNASEH2B	91	62.555	ENSDARG00000005128	rnaseh2b	68	62.736	Danio_rerio
ENSLACG00000010782	RNASEH2B	89	56.109	ENSDNOG00000034290	-	68	56.190	Dasypus_novemcinctus
ENSLACG00000010782	RNASEH2B	90	56.502	ENSDNOG00000049666	-	67	56.398	Dasypus_novemcinctus
ENSLACG00000010782	RNASEH2B	90	61.435	ENSDORG00000010708	Rnaseh2b	68	61.611	Dipodomys_ordii
ENSLACG00000010782	RNASEH2B	89	37.611	ENSEBUG00000005965	rnaseh2b	80	38.889	Eptatretus_burgeri
ENSLACG00000010782	RNASEH2B	90	62.780	ENSEASG00005017323	RNASEH2B	68	62.085	Equus_asinus_asinus
ENSLACG00000010782	RNASEH2B	90	62.780	ENSECAG00000014262	RNASEH2B	68	62.085	Equus_caballus
ENSLACG00000010782	RNASEH2B	92	59.649	ENSELUG00000019560	rnaseh2b	73	59.649	Esox_lucius
ENSLACG00000010782	RNASEH2B	87	58.333	ENSFCAG00000014257	RNASEH2B	66	58.294	Felis_catus
ENSLACG00000010782	RNASEH2B	91	63.436	ENSFALG00000008435	RNASEH2B	77	63.436	Ficedula_albicollis
ENSLACG00000010782	RNASEH2B	90	57.848	ENSFDAG00000009920	RNASEH2B	73	57.346	Fukomys_damarensis
ENSLACG00000010782	RNASEH2B	92	61.842	ENSFHEG00000012160	rnaseh2b	68	61.792	Fundulus_heteroclitus
ENSLACG00000010782	RNASEH2B	92	57.692	ENSGMOG00000016830	rnaseh2b	74	58.257	Gadus_morhua
ENSLACG00000010782	RNASEH2B	85	62.441	ENSGALG00000017015	RNASEH2B	68	62.441	Gallus_gallus
ENSLACG00000010782	RNASEH2B	92	60.088	ENSGAFG00000021222	rnaseh2b	68	59.906	Gambusia_affinis
ENSLACG00000010782	RNASEH2B	92	59.829	ENSGACG00000002821	rnaseh2b	69	59.633	Gasterosteus_aculeatus
ENSLACG00000010782	RNASEH2B	91	65.639	ENSGAGG00000014722	RNASEH2B	75	66.509	Gopherus_agassizii
ENSLACG00000010782	RNASEH2B	90	61.161	ENSGGOG00000001044	RNASEH2B	68	60.849	Gorilla_gorilla
ENSLACG00000010782	RNASEH2B	92	61.842	ENSHBUG00000006049	rnaseh2b	73	61.792	Haplochromis_burtoni
ENSLACG00000010782	RNASEH2B	90	60.090	ENSHGLG00100015953	RNASEH2B	71	59.716	Heterocephalus_glaber_male
ENSLACG00000010782	RNASEH2B	92	58.150	ENSHCOG00000003318	rnaseh2b	73	57.820	Hippocampus_comes
ENSLACG00000010782	RNASEH2B	90	62.946	ENSIPUG00000023815	rnaseh2b	68	62.264	Ictalurus_punctatus
ENSLACG00000010782	RNASEH2B	90	64.414	ENSSTOG00000015126	RNASEH2B	72	64.455	Ictidomys_tridecemlineatus
ENSLACG00000010782	RNASEH2B	91	60.793	ENSJJAG00000013335	Rnaseh2b	71	60.664	Jaculus_jaculus
ENSLACG00000010782	RNASEH2B	92	64.035	ENSKMAG00000002198	rnaseh2b	68	64.151	Kryptolebias_marmoratus
ENSLACG00000010782	RNASEH2B	92	61.842	ENSLBEG00000019331	rnaseh2b	68	62.264	Labrus_bergylta
ENSLACG00000010782	RNASEH2B	92	67.982	ENSLOCG00000009296	rnaseh2b	73	67.982	Lepisosteus_oculatus
ENSLACG00000010782	RNASEH2B	90	59.375	ENSLAFG00000030158	RNASEH2B	68	59.434	Loxodonta_africana
ENSLACG00000010782	RNASEH2B	90	61.435	ENSMFAG00000038464	-	72	61.435	Macaca_fascicularis
ENSLACG00000010782	RNASEH2B	90	55.157	ENSMMUG00000021746	RNASEH2B	68	55.157	Macaca_mulatta
ENSLACG00000010782	RNASEH2B	90	61.435	ENSMNEG00000030580	RNASEH2B	72	61.435	Macaca_nemestrina
ENSLACG00000010782	RNASEH2B	90	61.161	ENSMLEG00000043911	-	68	60.849	Mandrillus_leucophaeus
ENSLACG00000010782	RNASEH2B	92	62.281	ENSMAMG00000017109	rnaseh2b	68	62.264	Mastacembelus_armatus
ENSLACG00000010782	RNASEH2B	92	61.404	ENSMZEG00005021926	rnaseh2b	69	61.321	Maylandia_zebra
ENSLACG00000010782	RNASEH2B	85	62.911	ENSMGAG00000015025	RNASEH2B	74	62.911	Meleagris_gallopavo
ENSLACG00000010782	RNASEH2B	92	58.590	ENSMAUG00000016520	Rnaseh2b	73	58.590	Mesocricetus_auratus
ENSLACG00000010782	RNASEH2B	90	59.641	ENSMICG00000000528	RNASEH2B	68	59.242	Microcebus_murinus
ENSLACG00000010782	RNASEH2B	91	62.115	ENSMMOG00000019799	rnaseh2b	73	62.264	Mola_mola
ENSLACG00000010782	RNASEH2B	91	63.436	ENSMODG00000010775	RNASEH2B	69	63.679	Monodelphis_domestica
ENSLACG00000010782	RNASEH2B	91	64.758	ENSMALG00000004463	rnaseh2b	69	64.623	Monopterus_albus
ENSLACG00000010782	RNASEH2B	91	61.674	MGP_CAROLIEiJ_G0019389	Rnaseh2b	83	61.674	Mus_caroli
ENSLACG00000010782	RNASEH2B	91	61.674	ENSMUSG00000021932	Rnaseh2b	73	61.674	Mus_musculus
ENSLACG00000010782	RNASEH2B	65	62.346	MGP_PahariEiJ_G0030407	-	77	47.744	Mus_pahari
ENSLACG00000010782	RNASEH2B	66	56.707	ENSMPUG00000018010	RNASEH2B	68	56.707	Mustela_putorius_furo
ENSLACG00000010782	RNASEH2B	90	60.987	ENSMLUG00000004065	-	68	60.190	Myotis_lucifugus
ENSLACG00000010782	RNASEH2B	92	62.281	ENSNBRG00000003253	rnaseh2b	69	61.792	Neolamprologus_brichardi
ENSLACG00000010782	RNASEH2B	90	61.607	ENSNLEG00000003804	RNASEH2B	68	61.321	Nomascus_leucogenys
ENSLACG00000010782	RNASEH2B	92	63.755	ENSMEUG00000003665	RNASEH2B	73	65.094	Notamacropus_eugenii
ENSLACG00000010782	RNASEH2B	76	52.660	ENSODEG00000005412	-	76	52.660	Octodon_degus
ENSLACG00000010782	RNASEH2B	90	59.193	ENSODEG00000006793	-	68	58.768	Octodon_degus
ENSLACG00000010782	RNASEH2B	92	61.842	ENSONIG00000006657	rnaseh2b	68	61.792	Oreochromis_niloticus
ENSLACG00000010782	RNASEH2B	91	65.066	ENSOANG00000015537	RNASEH2B	79	65.066	Ornithorhynchus_anatinus
ENSLACG00000010782	RNASEH2B	91	57.965	ENSOCUG00000008904	RNASEH2B	66	57.820	Oryctolagus_cuniculus
ENSLACG00000010782	RNASEH2B	90	58.929	ENSORLG00000011850	rnaseh2b	69	58.019	Oryzias_latipes
ENSLACG00000010782	RNASEH2B	90	59.375	ENSORLG00020012081	rnaseh2b	69	58.491	Oryzias_latipes_hni
ENSLACG00000010782	RNASEH2B	90	58.929	ENSORLG00015015468	rnaseh2b	69	58.491	Oryzias_latipes_hsok
ENSLACG00000010782	RNASEH2B	90	60.268	ENSOMEG00000012441	rnaseh2b	69	59.906	Oryzias_melastigma
ENSLACG00000010782	RNASEH2B	91	59.389	ENSOGAG00000016486	RNASEH2B	71	59.434	Otolemur_garnettii
ENSLACG00000010782	RNASEH2B	90	57.658	ENSOARG00000008701	RNASEH2B	71	57.346	Ovis_aries
ENSLACG00000010782	RNASEH2B	99	57.028	ENSPPAG00000026374	RNASEH2B	82	57.028	Pan_paniscus
ENSLACG00000010782	RNASEH2B	90	58.667	ENSPPRG00000012450	RNASEH2B	74	58.667	Panthera_pardus
ENSLACG00000010782	RNASEH2B	90	59.111	ENSPTIG00000013918	RNASEH2B	80	59.111	Panthera_tigris_altaica
ENSLACG00000010782	RNASEH2B	92	61.304	ENSPTRG00000005886	RNASEH2B	87	61.304	Pan_troglodytes
ENSLACG00000010782	RNASEH2B	90	61.161	ENSPANG00000022424	-	68	60.849	Papio_anubis
ENSLACG00000010782	RNASEH2B	92	60.526	ENSPKIG00000013386	rnaseh2b	68	60.849	Paramormyrops_kingsleyae
ENSLACG00000010782	RNASEH2B	52	61.240	ENSPSIG00000002224	RNASEH2B	59	61.240	Pelodiscus_sinensis
ENSLACG00000010782	RNASEH2B	81	60.591	ENSPMGG00000010299	rnaseh2b	91	60.209	Periophthalmus_magnuspinnatus
ENSLACG00000010782	RNASEH2B	92	59.031	ENSPEMG00000019721	Rnaseh2b	73	59.031	Peromyscus_maniculatus_bairdii
ENSLACG00000010782	RNASEH2B	77	61.979	ENSPCIG00000014535	-	64	61.979	Phascolarctos_cinereus
ENSLACG00000010782	RNASEH2B	92	60.870	ENSPFOG00000016722	rnaseh2b	69	60.748	Poecilia_formosa
ENSLACG00000010782	RNASEH2B	92	61.404	ENSPLAG00000011755	rnaseh2b	68	61.321	Poecilia_latipinna
ENSLACG00000010782	RNASEH2B	92	61.404	ENSPMEG00000002721	rnaseh2b	68	61.321	Poecilia_mexicana
ENSLACG00000010782	RNASEH2B	92	60.088	ENSPREG00000007737	rnaseh2b	68	59.906	Poecilia_reticulata
ENSLACG00000010782	RNASEH2B	90	61.161	ENSPPYG00000005378	RNASEH2B	68	60.849	Pongo_abelii
ENSLACG00000010782	RNASEH2B	90	61.435	ENSPCOG00000026623	RNASEH2B	72	61.435	Propithecus_coquereli
ENSLACG00000010782	RNASEH2B	77	59.896	ENSPVAG00000000508	RNASEH2B	72	59.896	Pteropus_vampyrus
ENSLACG00000010782	RNASEH2B	92	61.842	ENSPNYG00000013552	rnaseh2b	73	61.792	Pundamilia_nyererei
ENSLACG00000010782	RNASEH2B	91	59.912	ENSPNAG00000024825	rnaseh2b	68	59.906	Pygocentrus_nattereri
ENSLACG00000010782	RNASEH2B	91	59.471	ENSRNOG00000009192	Rnaseh2b	73	59.471	Rattus_norvegicus
ENSLACG00000010782	RNASEH2B	88	54.128	ENSRBIG00000036017	-	67	54.028	Rhinopithecus_bieti
ENSLACG00000010782	RNASEH2B	90	60.987	ENSRBIG00000028928	-	74	57.317	Rhinopithecus_bieti
ENSLACG00000010782	RNASEH2B	68	48.214	ENSRROG00000044915	-	61	48.214	Rhinopithecus_roxellana
ENSLACG00000010782	RNASEH2B	90	60.987	ENSRROG00000018808	-	68	60.664	Rhinopithecus_roxellana
ENSLACG00000010782	RNASEH2B	90	61.435	ENSSBOG00000008081	RNASEH2B	75	61.137	Saimiri_boliviensis_boliviensis
ENSLACG00000010782	RNASEH2B	92	63.596	ENSSHAG00000016190	RNASEH2B	73	64.317	Sarcophilus_harrisii
ENSLACG00000010782	RNASEH2B	91	61.233	ENSSFOG00015010190	rnaseh2b	68	61.321	Scleropages_formosus
ENSLACG00000010782	RNASEH2B	92	62.719	ENSSMAG00000001546	rnaseh2b	68	62.736	Scophthalmus_maximus
ENSLACG00000010782	RNASEH2B	92	65.351	ENSSDUG00000007567	rnaseh2b	68	65.566	Seriola_dumerili
ENSLACG00000010782	RNASEH2B	92	64.912	ENSSLDG00000012485	rnaseh2b	70	65.094	Seriola_lalandi_dorsalis
ENSLACG00000010782	RNASEH2B	91	62.882	ENSSPUG00000006745	-	76	62.617	Sphenodon_punctatus
ENSLACG00000010782	RNASEH2B	92	63.596	ENSSPAG00000020926	rnaseh2b	68	63.679	Stegastes_partitus
ENSLACG00000010782	RNASEH2B	91	60.088	ENSSSCG00000024385	RNASEH2B	82	60.190	Sus_scrofa
ENSLACG00000010782	RNASEH2B	91	62.996	ENSTGUG00000012104	RNASEH2B	83	62.996	Taeniopygia_guttata
ENSLACG00000010782	RNASEH2B	94	60.944	ENSTRUG00000015098	rnaseh2b	68	62.264	Takifugu_rubripes
ENSLACG00000010782	RNASEH2B	92	63.043	ENSTNIG00000013861	rnaseh2b	69	63.084	Tetraodon_nigroviridis
ENSLACG00000010782	RNASEH2B	83	58.095	ENSTTRG00000010761	RNASEH2B	63	58.031	Tursiops_truncatus
ENSLACG00000010782	RNASEH2B	90	61.883	ENSUAMG00000022849	RNASEH2B	75	61.137	Ursus_americanus
ENSLACG00000010782	RNASEH2B	90	60.987	ENSUMAG00000018556	RNASEH2B	75	60.190	Ursus_maritimus
ENSLACG00000010782	RNASEH2B	91	60.088	ENSVPAG00000005679	RNASEH2B	73	60.190	Vicugna_pacos
ENSLACG00000010782	RNASEH2B	92	57.456	ENSVVUG00000024015	RNASEH2B	63	56.872	Vulpes_vulpes
ENSLACG00000010782	RNASEH2B	91	68.282	ENSXETG00000020720	rnaseh2b	68	68.868	Xenopus_tropicalis
ENSLACG00000010782	RNASEH2B	92	60.088	ENSXCOG00000018732	rnaseh2b	71	59.906	Xiphophorus_couchianus
ENSLACG00000010782	RNASEH2B	92	60.088	ENSXMAG00000022554	rnaseh2b	68	59.906	Xiphophorus_maculatus