EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010795 (Gene tree)
Gene ID: 102350702
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 46687 bases
Position: chrJH126846.1:534668-581354
Accession: 102350702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012263	MMR_HSR1	PF01926.23	3.4e-06	1	1
ENSLACP00000022150	MMR_HSR1	PF01926.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012355	-	769	XM_005995902	ENSLACP00000012263	198 (aa)	XP_005995964	H3ARJ2
ENSLACT00000025012	-	5030	XM_005995901	ENSLACP00000022150	198 (aa)	XP_005995963	H3ARJ2

Gene Model

Click here to download ENSLACG00000010795's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010795	sar1b	100	68.844	ENSLACG00000017029	-	100	68.844
ENSLACG00000010795	sar1b	61	38.400	ENSLACG00000003905	ARL4D	63	38.400
ENSLACG00000010795	sar1b	74	31.544	ENSLACG00000003169	-	80	31.544
ENSLACG00000010795	sar1b	72	34.965	ENSLACG00000010889	-	74	34.965
ENSLACG00000010795	sar1b	70	33.333	ENSLACG00000012168	-	92	33.333
ENSLACG00000010795	sar1b	64	35.115	ENSLACG00000002695	ARL4A	63	35.115
ENSLACG00000010795	sar1b	90	31.285	ENSLACG00000015381	ARF4	92	31.285
ENSLACG00000010795	sar1b	62	36.585	ENSLACG00000011405	ARL11	64	36.585
ENSLACG00000010795	sar1b	66	31.852	ENSLACG00000015350	ARL4C	67	31.852
ENSLACG00000010795	sar1b	74	32.215	ENSLACG00000014881	ARL8A	80	32.215
ENSLACG00000010795	sar1b	98	31.633	ENSLACG00000016598	arl3l1	92	31.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010795	sar1b	100	87.374	ENSAPOG00000007186	sar1b	100	87.374	Acanthochromis_polyacanthus
ENSLACG00000010795	sar1b	100	81.313	ENSAPOG00000017891	-	100	81.313	Acanthochromis_polyacanthus
ENSLACG00000010795	sar1b	100	88.384	ENSACIG00000013634	sar1b	100	88.384	Amphilophus_citrinellus
ENSLACG00000010795	sar1b	100	80.303	ENSACIG00000024513	-	100	80.303	Amphilophus_citrinellus
ENSLACG00000010795	sar1b	100	86.869	ENSAOCG00000005888	sar1b	100	86.869	Amphiprion_ocellaris
ENSLACG00000010795	sar1b	100	81.313	ENSAOCG00000002627	-	100	81.313	Amphiprion_ocellaris
ENSLACG00000010795	sar1b	100	81.313	ENSAPEG00000019680	-	100	81.313	Amphiprion_percula
ENSLACG00000010795	sar1b	100	86.869	ENSAPEG00000022771	sar1b	100	86.869	Amphiprion_percula
ENSLACG00000010795	sar1b	100	84.848	ENSATEG00000012904	sar1b	100	84.848	Anabas_testudineus
ENSLACG00000010795	sar1b	100	79.798	ENSATEG00000023368	-	100	79.798	Anabas_testudineus
ENSLACG00000010795	sar1b	100	86.364	ENSACAG00000001470	-	100	86.364	Anolis_carolinensis
ENSLACG00000010795	sar1b	100	87.374	ENSACLG00000014649	sar1b	100	87.374	Astatotilapia_calliptera
ENSLACG00000010795	sar1b	100	81.313	ENSACLG00000005011	-	100	81.313	Astatotilapia_calliptera
ENSLACG00000010795	sar1b	59	87.179	ENSAMXG00000018108	sar1b	84	87.179	Astyanax_mexicanus
ENSLACG00000010795	sar1b	100	82.323	ENSAMXG00000034192	-	91	82.323	Astyanax_mexicanus
ENSLACG00000010795	sar1b	100	79.293	ENSCSEG00000016976	-	100	79.293	Cynoglossus_semilaevis
ENSLACG00000010795	sar1b	92	87.912	ENSCSEG00000015238	sar1b	90	87.912	Cynoglossus_semilaevis
ENSLACG00000010795	sar1b	100	86.869	ENSCVAG00000022959	sar1b	100	86.869	Cyprinodon_variegatus
ENSLACG00000010795	sar1b	100	87.879	ENSDARG00000103403	sar1b	100	87.879	Danio_rerio
ENSLACG00000010795	sar1b	97	69.792	FBgn0038947	Sar1	99	69.792	Drosophila_melanogaster
ENSLACG00000010795	sar1b	98	82.990	ENSEBUG00000011723	sar1b	98	83.420	Eptatretus_burgeri
ENSLACG00000010795	sar1b	100	89.394	ENSELUG00000020912	sar1b	100	89.394	Esox_lucius
ENSLACG00000010795	sar1b	100	86.869	ENSFHEG00000019865	sar1b	100	86.869	Fundulus_heteroclitus
ENSLACG00000010795	sar1b	100	86.869	ENSGMOG00000008023	sar1b	100	86.869	Gadus_morhua
ENSLACG00000010795	sar1b	100	85.859	ENSGAFG00000007081	sar1b	100	85.859	Gambusia_affinis
ENSLACG00000010795	sar1b	100	85.859	ENSGACG00000001474	sar1b	100	85.859	Gasterosteus_aculeatus
ENSLACG00000010795	sar1b	100	81.313	ENSHBUG00000018397	-	100	81.313	Haplochromis_burtoni
ENSLACG00000010795	sar1b	100	87.374	ENSHBUG00000000915	sar1b	100	87.374	Haplochromis_burtoni
ENSLACG00000010795	sar1b	100	86.869	ENSHCOG00000010953	sar1b	100	86.869	Hippocampus_comes
ENSLACG00000010795	sar1b	100	83.838	ENSIPUG00000010046	sar1b	100	83.838	Ictalurus_punctatus
ENSLACG00000010795	sar1b	100	86.869	ENSIPUG00000020925	sar1b	100	86.869	Ictalurus_punctatus
ENSLACG00000010795	sar1b	100	79.293	ENSKMAG00000014875	-	100	79.293	Kryptolebias_marmoratus
ENSLACG00000010795	sar1b	100	86.364	ENSKMAG00000019693	sar1b	100	86.364	Kryptolebias_marmoratus
ENSLACG00000010795	sar1b	100	82.323	ENSLBEG00000016945	-	100	82.323	Labrus_bergylta
ENSLACG00000010795	sar1b	100	84.343	ENSLBEG00000027550	sar1b	100	84.343	Labrus_bergylta
ENSLACG00000010795	sar1b	100	87.374	ENSLOCG00000010197	sar1b	100	87.374	Lepisosteus_oculatus
ENSLACG00000010795	sar1b	100	86.364	ENSLOCG00000005214	-	100	86.364	Lepisosteus_oculatus
ENSLACG00000010795	sar1b	100	84.848	ENSMAMG00000021732	sar1b	100	84.848	Mastacembelus_armatus
ENSLACG00000010795	sar1b	100	81.313	ENSMZEG00005001012	-	100	81.313	Maylandia_zebra
ENSLACG00000010795	sar1b	100	87.374	ENSMZEG00005008942	sar1b	100	87.374	Maylandia_zebra
ENSLACG00000010795	sar1b	90	89.944	ENSMGAG00000005387	-	91	89.944	Meleagris_gallopavo
ENSLACG00000010795	sar1b	100	80.303	ENSMMOG00000013803	-	100	80.303	Mola_mola
ENSLACG00000010795	sar1b	100	87.374	ENSMALG00000016635	sar1b	97	87.363	Monopterus_albus
ENSLACG00000010795	sar1b	100	86.869	ENSNBRG00000008013	sar1b	100	86.869	Neolamprologus_brichardi
ENSLACG00000010795	sar1b	100	81.313	ENSNBRG00000014004	-	100	81.313	Neolamprologus_brichardi
ENSLACG00000010795	sar1b	100	87.879	ENSONIG00000017278	sar1b	100	87.879	Oreochromis_niloticus
ENSLACG00000010795	sar1b	100	85.859	ENSORLG00000000932	sar1b	100	85.859	Oryzias_latipes
ENSLACG00000010795	sar1b	100	85.859	ENSORLG00020021985	sar1b	100	85.859	Oryzias_latipes_hni
ENSLACG00000010795	sar1b	100	85.859	ENSORLG00015007044	sar1b	100	85.859	Oryzias_latipes_hsok
ENSLACG00000010795	sar1b	100	86.364	ENSOMEG00000001052	sar1b	100	86.364	Oryzias_melastigma
ENSLACG00000010795	sar1b	100	87.374	ENSPKIG00000010688	sar1b	100	87.374	Paramormyrops_kingsleyae
ENSLACG00000010795	sar1b	100	87.374	ENSPKIG00000017353	-	100	87.374	Paramormyrops_kingsleyae
ENSLACG00000010795	sar1b	59	87.931	ENSPMGG00000001234	sar1b	91	87.931	Periophthalmus_magnuspinnatus
ENSLACG00000010795	sar1b	100	82.090	ENSPMAG00000003593	sar1b	100	82.090	Petromyzon_marinus
ENSLACG00000010795	sar1b	100	85.859	ENSPFOG00000005666	sar1b	100	85.859	Poecilia_formosa
ENSLACG00000010795	sar1b	100	86.364	ENSPLAG00000012223	sar1b	100	86.364	Poecilia_latipinna
ENSLACG00000010795	sar1b	59	81.197	ENSPLAG00000001016	-	75	81.197	Poecilia_latipinna
ENSLACG00000010795	sar1b	100	85.859	ENSPMEG00000016831	sar1b	100	85.859	Poecilia_mexicana
ENSLACG00000010795	sar1b	60	80.508	ENSPREG00000002020	-	87	80.508	Poecilia_reticulata
ENSLACG00000010795	sar1b	100	85.859	ENSPREG00000005312	sar1b	90	85.859	Poecilia_reticulata
ENSLACG00000010795	sar1b	100	87.374	ENSPNYG00000012440	sar1b	100	87.374	Pundamilia_nyererei
ENSLACG00000010795	sar1b	100	81.313	ENSPNYG00000021357	-	100	81.313	Pundamilia_nyererei
ENSLACG00000010795	sar1b	100	83.333	ENSPNAG00000001123	-	100	83.333	Pygocentrus_nattereri
ENSLACG00000010795	sar1b	100	87.374	ENSPNAG00000014683	sar1b	100	87.374	Pygocentrus_nattereri
ENSLACG00000010795	sar1b	100	87.879	ENSSFOG00015018128	-	100	87.879	Scleropages_formosus
ENSLACG00000010795	sar1b	100	87.879	ENSSFOG00015020051	sar1b	100	87.879	Scleropages_formosus
ENSLACG00000010795	sar1b	100	85.354	ENSSMAG00000007106	sar1b	80	85.354	Scophthalmus_maximus
ENSLACG00000010795	sar1b	100	80.303	ENSSMAG00000002165	-	100	80.303	Scophthalmus_maximus
ENSLACG00000010795	sar1b	100	80.808	ENSSDUG00000019629	-	100	80.808	Seriola_dumerili
ENSLACG00000010795	sar1b	100	87.374	ENSSDUG00000020926	sar1b	100	87.374	Seriola_dumerili
ENSLACG00000010795	sar1b	100	80.808	ENSSLDG00000024197	-	100	80.808	Seriola_lalandi_dorsalis
ENSLACG00000010795	sar1b	100	87.374	ENSSLDG00000017052	sar1b	100	87.374	Seriola_lalandi_dorsalis
ENSLACG00000010795	sar1b	100	86.364	ENSSPUG00000010247	-	100	86.364	Sphenodon_punctatus
ENSLACG00000010795	sar1b	100	87.879	ENSSPAG00000017634	sar1b	100	87.879	Stegastes_partitus
ENSLACG00000010795	sar1b	100	80.808	ENSSPAG00000015626	-	100	80.808	Stegastes_partitus
ENSLACG00000010795	sar1b	100	82.828	ENSTRUG00000023908	sar1b	100	82.828	Takifugu_rubripes
ENSLACG00000010795	sar1b	100	83.838	ENSTNIG00000016097	sar1b	100	83.838	Tetraodon_nigroviridis
ENSLACG00000010795	sar1b	61	78.333	ENSXCOG00000006154	-	81	78.333	Xiphophorus_couchianus
ENSLACG00000010795	sar1b	90	88.202	ENSXCOG00000004160	sar1b	87	88.202	Xiphophorus_couchianus
ENSLACG00000010795	sar1b	100	85.859	ENSXMAG00000008294	sar1b	100	85.859	Xiphophorus_maculatus