EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010804 (Gene tree)
Gene ID: 102359074
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 84343 bases
Position: chrJH127552.1:536383-620725
Accession: 102359074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012272	KH_1	PF00013.29	1.6e-54	1	3
ENSLACP00000012272	KH_1	PF00013.29	1.6e-54	2	3
ENSLACP00000012272	KH_1	PF00013.29	1.6e-54	3	3
ENSLACP00000012272	KH_2	PF07650.17	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012364	-	1425	XM_006004002	ENSLACP00000012272	474 (aa)	XP_006004064	H3ARK1

Gene Model

Click here to download ENSLACG00000010804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010804	zgc:110045	72	33.803	ENSLACG00000017619	FUBP3	63	33.803
ENSLACG00000010804	zgc:110045	98	66.667	ENSLACG00000001442	PCBP2	99	67.330
ENSLACG00000010804	zgc:110045	99	68.134	ENSLACG00000010386	pcbp3	79	79.521
ENSLACG00000010804	zgc:110045	54	44.000	ENSLACG00000005638	HNRNPK	60	44.000
ENSLACG00000010804	zgc:110045	100	60.970	ENSLACG00000015899	PCBP4	97	70.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010804	zgc:110045	77	75.543	ENSAPOG00000016582	-	99	75.543	Acanthochromis_polyacanthus
ENSLACG00000010804	zgc:110045	74	74.716	ENSAPOG00000020003	pcbp3	85	74.716	Acanthochromis_polyacanthus
ENSLACG00000010804	zgc:110045	74	78.297	ENSAMEG00000001697	-	97	78.297	Ailuropoda_melanoleuca
ENSLACG00000010804	zgc:110045	77	75.824	ENSACIG00000010933	pcbp3	98	75.824	Amphilophus_citrinellus
ENSLACG00000010804	zgc:110045	74	75.921	ENSACIG00000002739	-	96	75.921	Amphilophus_citrinellus
ENSLACG00000010804	zgc:110045	74	77.143	ENSAOCG00000008592	-	96	77.143	Amphiprion_ocellaris
ENSLACG00000010804	zgc:110045	73	72.455	ENSAOCG00000007806	-	98	72.455	Amphiprion_ocellaris
ENSLACG00000010804	zgc:110045	77	77.596	ENSAPEG00000008011	pcbp3	98	77.596	Amphiprion_percula
ENSLACG00000010804	zgc:110045	74	76.204	ENSAPEG00000005209	-	96	76.204	Amphiprion_percula
ENSLACG00000010804	zgc:110045	74	75.637	ENSATEG00000009833	-	96	75.637	Anabas_testudineus
ENSLACG00000010804	zgc:110045	73	78.386	ENSATEG00000015787	-	98	78.386	Anabas_testudineus
ENSLACG00000010804	zgc:110045	100	87.212	ENSAPLG00000008951	-	100	86.128	Anas_platyrhynchos
ENSLACG00000010804	zgc:110045	74	76.294	ENSAPLG00000002975	-	97	76.294	Anas_platyrhynchos
ENSLACG00000010804	zgc:110045	74	78.016	ENSACAG00000004607	-	97	78.016	Anolis_carolinensis
ENSLACG00000010804	zgc:110045	75	89.636	ENSACAG00000009819	-	97	89.636	Anolis_carolinensis
ENSLACG00000010804	zgc:110045	72	74.359	ENSANAG00000030702	-	96	74.359	Aotus_nancymaae
ENSLACG00000010804	zgc:110045	77	77.596	ENSACLG00000011835	pcbp3	98	77.596	Astatotilapia_calliptera
ENSLACG00000010804	zgc:110045	77	75.000	ENSACLG00000003801	-	99	75.000	Astatotilapia_calliptera
ENSLACG00000010804	zgc:110045	100	65.073	ENSAMXG00000001760	zgc:110045	100	63.883	Astyanax_mexicanus
ENSLACG00000010804	zgc:110045	77	78.846	ENSAMXG00000003440	pcbp3	98	78.846	Astyanax_mexicanus
ENSLACG00000010804	zgc:110045	74	74.359	ENSAMXG00000013588	-	99	74.359	Astyanax_mexicanus
ENSLACG00000010804	zgc:110045	72	75.899	ENSCAFG00020019472	-	78	80.995	Canis_lupus_dingo
ENSLACG00000010804	zgc:110045	74	78.470	ENSCSAG00000007440	-	88	78.470	Chlorocebus_sabaeus
ENSLACG00000010804	zgc:110045	74	79.320	ENSCPBG00000012151	-	97	75.067	Chrysemys_picta_bellii
ENSLACG00000010804	zgc:110045	100	97.717	ENSCPBG00000000733	-	100	97.717	Chrysemys_picta_bellii
ENSLACG00000010804	zgc:110045	74	66.017	ENSCSEG00000016984	-	75	88.235	Cynoglossus_semilaevis
ENSLACG00000010804	zgc:110045	73	74.928	ENSCSEG00000000822	pcbp3	87	85.308	Cynoglossus_semilaevis
ENSLACG00000010804	zgc:110045	78	74.595	ENSCVAG00000005262	-	97	76.901	Cyprinodon_variegatus
ENSLACG00000010804	zgc:110045	77	77.596	ENSCVAG00000014482	pcbp3	98	77.596	Cyprinodon_variegatus
ENSLACG00000010804	zgc:110045	76	84.722	ENSDARG00000054378	pcbp3	100	77.976	Danio_rerio
ENSLACG00000010804	zgc:110045	74	67.422	ENSETEG00000015988	-	97	67.422	Echinops_telfairi
ENSLACG00000010804	zgc:110045	71	59.310	ENSEBUG00000005495	pcbp3	73	59.310	Eptatretus_burgeri
ENSLACG00000010804	zgc:110045	98	62.605	ENSEBUG00000007485	-	99	63.445	Eptatretus_burgeri
ENSLACG00000010804	zgc:110045	72	64.537	ENSEBUG00000016192	pcbp3	99	64.537	Eptatretus_burgeri
ENSLACG00000010804	zgc:110045	76	78.571	ENSELUG00000003521	pcbp3	97	78.571	Esox_lucius
ENSLACG00000010804	zgc:110045	76	75.758	ENSELUG00000001560	-	94	73.352	Esox_lucius
ENSLACG00000010804	zgc:110045	74	79.320	ENSFALG00000003949	-	97	79.320	Ficedula_albicollis
ENSLACG00000010804	zgc:110045	100	93.082	ENSFALG00000004411	-	100	93.711	Ficedula_albicollis
ENSLACG00000010804	zgc:110045	75	74.930	ENSFHEG00000006539	-	97	74.930	Fundulus_heteroclitus
ENSLACG00000010804	zgc:110045	76	73.204	ENSFHEG00000016615	pcbp3	97	73.204	Fundulus_heteroclitus
ENSLACG00000010804	zgc:110045	74	66.310	ENSGMOG00000011992	pcbp3	95	66.488	Gadus_morhua
ENSLACG00000010804	zgc:110045	75	56.032	ENSGMOG00000008611	-	98	56.911	Gadus_morhua
ENSLACG00000010804	zgc:110045	76	90.582	ENSGALG00000013155	-	98	88.825	Gallus_gallus
ENSLACG00000010804	zgc:110045	74	76.139	ENSGALG00000004394	-	100	77.251	Gallus_gallus
ENSLACG00000010804	zgc:110045	74	76.286	ENSGAFG00000011430	pcbp3	94	76.286	Gambusia_affinis
ENSLACG00000010804	zgc:110045	78	74.865	ENSGAFG00000010274	-	99	74.865	Gambusia_affinis
ENSLACG00000010804	zgc:110045	73	70.572	ENSGACG00000014955	-	95	70.572	Gasterosteus_aculeatus
ENSLACG00000010804	zgc:110045	74	73.585	ENSGACG00000002266	-	95	73.585	Gasterosteus_aculeatus
ENSLACG00000010804	zgc:110045	58	78.802	ENSGAGG00000006956	-	88	78.802	Gopherus_agassizii
ENSLACG00000010804	zgc:110045	96	91.688	ENSGAGG00000000271	-	100	91.688	Gopherus_agassizii
ENSLACG00000010804	zgc:110045	77	77.596	ENSHBUG00000010697	pcbp3	98	77.596	Haplochromis_burtoni
ENSLACG00000010804	zgc:110045	77	75.000	ENSHBUG00000021782	-	99	75.000	Haplochromis_burtoni
ENSLACG00000010804	zgc:110045	74	69.801	ENSHCOG00000006067	-	95	73.926	Hippocampus_comes
ENSLACG00000010804	zgc:110045	77	77.808	ENSHCOG00000017868	pcbp3	98	77.808	Hippocampus_comes
ENSLACG00000010804	zgc:110045	59	59.524	ENSIPUG00000003914	zgc:110045	100	60.377	Ictalurus_punctatus
ENSLACG00000010804	zgc:110045	74	81.662	ENSIPUG00000006238	pcbp3	95	81.662	Ictalurus_punctatus
ENSLACG00000010804	zgc:110045	77	77.596	ENSKMAG00000003046	pcbp3	98	77.596	Kryptolebias_marmoratus
ENSLACG00000010804	zgc:110045	76	75.138	ENSKMAG00000018530	-	97	75.138	Kryptolebias_marmoratus
ENSLACG00000010804	zgc:110045	77	60.705	ENSLBEG00000006542	-	99	65.217	Labrus_bergylta
ENSLACG00000010804	zgc:110045	74	74.785	ENSLBEG00000006201	pcbp3	93	74.785	Labrus_bergylta
ENSLACG00000010804	zgc:110045	74	82.153	ENSLOCG00000009369	pcbp3	97	82.153	Lepisosteus_oculatus
ENSLACG00000010804	zgc:110045	100	92.616	ENSLOCG00000005058	zgc:110045	100	92.616	Lepisosteus_oculatus
ENSLACG00000010804	zgc:110045	75	73.669	ENSMAMG00000022336	pcbp3	94	73.669	Mastacembelus_armatus
ENSLACG00000010804	zgc:110045	74	75.921	ENSMAMG00000011620	-	96	75.921	Mastacembelus_armatus
ENSLACG00000010804	zgc:110045	77	71.467	ENSMZEG00005014882	-	99	72.011	Maylandia_zebra
ENSLACG00000010804	zgc:110045	77	75.824	ENSMZEG00005008993	pcbp3	98	75.824	Maylandia_zebra
ENSLACG00000010804	zgc:110045	100	93.711	ENSMGAG00000006794	-	100	93.291	Meleagris_gallopavo
ENSLACG00000010804	zgc:110045	75	70.856	ENSMGAG00000001883	-	97	70.789	Meleagris_gallopavo
ENSLACG00000010804	zgc:110045	74	75.071	ENSMMOG00000005216	-	96	75.071	Mola_mola
ENSLACG00000010804	zgc:110045	74	74.148	ENSMMOG00000000730	pcbp3	86	74.148	Mola_mola
ENSLACG00000010804	zgc:110045	55	70.464	ENSMODG00000027884	-	94	70.464	Monodelphis_domestica
ENSLACG00000010804	zgc:110045	77	75.824	ENSMALG00000000691	pcbp3	98	75.824	Monopterus_albus
ENSLACG00000010804	zgc:110045	74	68.633	ENSMPUG00000001779	-	89	68.633	Mustela_putorius_furo
ENSLACG00000010804	zgc:110045	77	75.824	ENSNBRG00000016409	-	98	75.824	Neolamprologus_brichardi
ENSLACG00000010804	zgc:110045	77	73.458	ENSNBRG00000016714	-	99	73.458	Neolamprologus_brichardi
ENSLACG00000010804	zgc:110045	74	75.202	ENSOPRG00000003431	-	99	75.202	Ochotona_princeps
ENSLACG00000010804	zgc:110045	75	74.734	ENSONIG00000012122	-	98	74.734	Oreochromis_niloticus
ENSLACG00000010804	zgc:110045	74	77.337	ENSONIG00000004611	-	96	77.337	Oreochromis_niloticus
ENSLACG00000010804	zgc:110045	74	78.470	ENSOCUG00000002696	-	88	78.470	Oryctolagus_cuniculus
ENSLACG00000010804	zgc:110045	78	75.202	ENSORLG00000022739	-	97	77.465	Oryzias_latipes
ENSLACG00000010804	zgc:110045	73	77.522	ENSORLG00000000059	pcbp3	97	77.522	Oryzias_latipes
ENSLACG00000010804	zgc:110045	73	77.522	ENSORLG00020012671	pcbp3	95	77.522	Oryzias_latipes_hni
ENSLACG00000010804	zgc:110045	78	74.933	ENSORLG00020006124	-	97	77.183	Oryzias_latipes_hni
ENSLACG00000010804	zgc:110045	78	75.202	ENSORLG00015008051	-	99	75.202	Oryzias_latipes_hsok
ENSLACG00000010804	zgc:110045	73	77.522	ENSORLG00015000429	pcbp3	95	77.522	Oryzias_latipes_hsok
ENSLACG00000010804	zgc:110045	72	75.077	ENSOMEG00000020811	pcbp3	97	75.077	Oryzias_melastigma
ENSLACG00000010804	zgc:110045	75	77.465	ENSOMEG00000020162	-	97	77.465	Oryzias_melastigma
ENSLACG00000010804	zgc:110045	74	74.142	ENSOGAG00000008044	-	97	74.142	Otolemur_garnettii
ENSLACG00000010804	zgc:110045	59	86.301	ENSPKIG00000020913	-	95	86.301	Paramormyrops_kingsleyae
ENSLACG00000010804	zgc:110045	77	75.543	ENSPKIG00000019329	pcbp3	98	75.824	Paramormyrops_kingsleyae
ENSLACG00000010804	zgc:110045	74	68.108	ENSPSIG00000014970	-	97	68.649	Pelodiscus_sinensis
ENSLACG00000010804	zgc:110045	96	91.948	ENSPSIG00000008350	-	100	91.948	Pelodiscus_sinensis
ENSLACG00000010804	zgc:110045	77	77.961	ENSPMGG00000022383	pcbp3	98	77.961	Periophthalmus_magnuspinnatus
ENSLACG00000010804	zgc:110045	74	64.986	ENSPMAG00000004551	pcbp3	89	64.986	Petromyzon_marinus
ENSLACG00000010804	zgc:110045	53	90.625	ENSPMAG00000004637	-	99	90.625	Petromyzon_marinus
ENSLACG00000010804	zgc:110045	74	82.153	ENSPCIG00000028092	-	97	82.153	Phascolarctos_cinereus
ENSLACG00000010804	zgc:110045	75	71.958	ENSPLAG00000011449	pcbp3	89	71.958	Poecilia_latipinna
ENSLACG00000010804	zgc:110045	74	72.928	ENSPLAG00000004074	-	89	72.928	Poecilia_latipinna
ENSLACG00000010804	zgc:110045	77	72.358	ENSPMEG00000006653	-	99	72.358	Poecilia_mexicana
ENSLACG00000010804	zgc:110045	77	77.384	ENSPMEG00000021239	pcbp3	98	77.384	Poecilia_mexicana
ENSLACG00000010804	zgc:110045	74	73.011	ENSPREG00000015736	pcbp3	98	73.011	Poecilia_reticulata
ENSLACG00000010804	zgc:110045	74	75.424	ENSPREG00000020585	-	94	81.034	Poecilia_reticulata
ENSLACG00000010804	zgc:110045	74	74.359	ENSPNYG00000012326	pcbp3	94	74.359	Pundamilia_nyererei
ENSLACG00000010804	zgc:110045	74	75.071	ENSPNYG00000013205	-	96	75.071	Pundamilia_nyererei
ENSLACG00000010804	zgc:110045	74	77.937	ENSPNAG00000015104	pcbp3	95	77.937	Pygocentrus_nattereri
ENSLACG00000010804	zgc:110045	59	66.197	ENSPNAG00000006838	zgc:110045	100	64.319	Pygocentrus_nattereri
ENSLACG00000010804	zgc:110045	77	77.236	ENSPNAG00000008541	-	99	77.236	Pygocentrus_nattereri
ENSLACG00000010804	zgc:110045	74	78.470	ENSRNOG00000001245	Pcbp3	97	78.470	Rattus_norvegicus
ENSLACG00000010804	zgc:110045	74	70.411	ENSRBIG00000028177	-	97	69.351	Rhinopithecus_bieti
ENSLACG00000010804	zgc:110045	74	76.064	ENSSHAG00000007890	-	97	74.799	Sarcophilus_harrisii
ENSLACG00000010804	zgc:110045	75	78.310	ENSSFOG00015007118	-	95	78.310	Scleropages_formosus
ENSLACG00000010804	zgc:110045	77	77.747	ENSSFOG00015014706	pcbp3	98	77.747	Scleropages_formosus
ENSLACG00000010804	zgc:110045	74	79.487	ENSSFOG00015010205	pcbp3	98	79.827	Scleropages_formosus
ENSLACG00000010804	zgc:110045	73	75.216	ENSSMAG00000011929	pcbp3	95	75.216	Scophthalmus_maximus
ENSLACG00000010804	zgc:110045	77	75.275	ENSSMAG00000003135	-	98	75.275	Scophthalmus_maximus
ENSLACG00000010804	zgc:110045	73	77.937	ENSSDUG00000011608	pcbp3	96	77.937	Seriola_dumerili
ENSLACG00000010804	zgc:110045	77	72.826	ENSSDUG00000008502	-	99	72.826	Seriola_dumerili
ENSLACG00000010804	zgc:110045	77	75.543	ENSSLDG00000020161	-	99	75.543	Seriola_lalandi_dorsalis
ENSLACG00000010804	zgc:110045	73	77.937	ENSSLDG00000008518	pcbp3	96	77.937	Seriola_lalandi_dorsalis
ENSLACG00000010804	zgc:110045	100	91.561	ENSSPUG00000013214	-	100	91.350	Sphenodon_punctatus
ENSLACG00000010804	zgc:110045	72	73.171	ENSSPAG00000004190	-	97	73.171	Stegastes_partitus
ENSLACG00000010804	zgc:110045	77	65.934	ENSSPAG00000023341	-	98	65.934	Stegastes_partitus
ENSLACG00000010804	zgc:110045	74	84.136	ENSTGUG00000008158	-	97	84.136	Taeniopygia_guttata
ENSLACG00000010804	zgc:110045	74	72.118	ENSTGUG00000003316	-	97	72.118	Taeniopygia_guttata
ENSLACG00000010804	zgc:110045	77	74.725	ENSTRUG00000013604	pcbp3	84	90.104	Takifugu_rubripes
ENSLACG00000010804	zgc:110045	72	76.161	ENSTRUG00000006280	-	89	76.161	Takifugu_rubripes
ENSLACG00000010804	zgc:110045	74	76.676	ENSTTRG00000015075	-	97	76.676	Tursiops_truncatus
ENSLACG00000010804	zgc:110045	74	74.263	ENSXETG00000011483	pcbp1	97	74.263	Xenopus_tropicalis
ENSLACG00000010804	zgc:110045	97	92.527	ENSXETG00000010491	pcbp2	100	92.527	Xenopus_tropicalis
ENSLACG00000010804	zgc:110045	77	77.384	ENSXCOG00000020481	pcbp3	98	77.384	Xiphophorus_couchianus
ENSLACG00000010804	zgc:110045	77	77.596	ENSXMAG00000008175	pcbp3	98	77.596	Xiphophorus_maculatus
ENSLACG00000010804	zgc:110045	78	75.135	ENSXMAG00000028711	-	99	75.135	Xiphophorus_maculatus