EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000010862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 4352 bases
Position: chrJH127807.1:541355-545706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012335	RVT_1	PF00078.27	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012428	-	2652	-	ENSLACP00000012335	883 (aa)	-	H3ARR4

Gene Model

Click here to download ENSLACG00000010862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000010862	-	69	36.809	ENSLACG00000010776	-	96	45.665
ENSLACG00000010862	-	53	68.287	ENSLACG00000017143	-	85	68.287
ENSLACG00000010862	-	51	36.861	ENSLACG00000010367	-	71	36.861
ENSLACG00000010862	-	67	34.261	ENSLACG00000007131	-	83	33.826
ENSLACG00000010862	-	80	42.231	ENSLACG00000003314	-	72	42.231
ENSLACG00000010862	-	86	37.264	ENSLACG00000009168	-	93	37.264
ENSLACG00000010862	-	58	31.944	ENSLACG00000003991	-	64	31.944
ENSLACG00000010862	-	55	39.400	ENSLACG00000002169	-	85	39.400
ENSLACG00000010862	-	81	36.770	ENSLACG00000001186	-	99	38.994
ENSLACG00000010862	-	96	33.497	ENSLACG00000014947	-	75	33.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010862	-	93	43.101	ENSORLG00000029363	-	77	43.101	Oryzias_latipes
ENSLACG00000010862	-	63	45.317	ENSORLG00000026986	-	76	45.317	Oryzias_latipes
ENSLACG00000010862	-	78	39.975	ENSOMEG00000015073	-	91	39.975	Oryzias_melastigma