EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000010869 (Gene tree)
Gene ID: 102345241
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 139457 bases
Position: chrJH127634.1:541522-680978
Accession: 102345241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000012344	Not1	PF04054.15	6.6e-153	1	1
ENSLACP00000012345	Not1	PF04054.15	6.7e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000012438	CNOT1-201	8887	XM_006004610	ENSLACP00000012345	2413 (aa)	XP_006004672	H3ARS4
ENSLACT00000012437	CNOT1-202	7547	-	ENSLACP00000012344	2374 (aa)	-	H3ARS3

Gene Model

Click here to download ENSLACG00000010869's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000010869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000010869	CNOT1	100	95.076	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSLACG00000010869	CNOT1	99	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSLACG00000010869	CNOT1	100	94.781	ENSAMEG00000017298	CNOT1	100	94.781	Ailuropoda_melanoleuca
ENSLACG00000010869	CNOT1	90	90.401	ENSACIG00000016003	cnot1	100	90.820	Amphilophus_citrinellus
ENSLACG00000010869	CNOT1	100	90.302	ENSAPEG00000022342	cnot1	100	91.762	Amphiprion_percula
ENSLACG00000010869	CNOT1	99	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSLACG00000010869	CNOT1	100	94.874	ENSAPLG00000007162	CNOT1	100	94.874	Anas_platyrhynchos
ENSLACG00000010869	CNOT1	91	93.506	ENSACAG00000001602	CNOT1	98	93.506	Anolis_carolinensis
ENSLACG00000010869	CNOT1	100	92.124	ENSANAG00000038198	CNOT1	100	92.124	Aotus_nancymaae
ENSLACG00000010869	CNOT1	99	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSLACG00000010869	CNOT1	100	91.460	ENSAMXG00000013170	cnot1	100	91.884	Astyanax_mexicanus
ENSLACG00000010869	CNOT1	100	95.160	ENSBTAG00000020782	CNOT1	100	98.204	Bos_taurus
ENSLACG00000010869	CNOT1	82	40.777	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSLACG00000010869	CNOT1	100	95.034	ENSCJAG00000011318	CNOT1	100	95.034	Callithrix_jacchus
ENSLACG00000010869	CNOT1	100	94.708	ENSCAFG00000008426	CNOT1	100	94.708	Canis_familiaris
ENSLACG00000010869	CNOT1	100	93.962	ENSCAFG00020010156	CNOT1	100	95.568	Canis_lupus_dingo
ENSLACG00000010869	CNOT1	100	95.160	ENSCHIG00000010452	CNOT1	100	95.160	Capra_hircus
ENSLACG00000010869	CNOT1	100	95.118	ENSTSYG00000006888	CNOT1	100	95.118	Carlito_syrichta
ENSLACG00000010869	CNOT1	100	90.993	ENSCPOG00000013026	CNOT1	100	91.077	Cavia_porcellus
ENSLACG00000010869	CNOT1	100	93.434	ENSCCAG00000026333	CNOT1	100	93.434	Cebus_capucinus
ENSLACG00000010869	CNOT1	100	95.034	ENSCATG00000032625	CNOT1	100	95.034	Cercocebus_atys
ENSLACG00000010869	CNOT1	100	95.076	ENSCLAG00000006289	CNOT1	100	95.076	Chinchilla_lanigera
ENSLACG00000010869	CNOT1	100	95.034	ENSCSAG00000004731	CNOT1	100	95.034	Chlorocebus_sabaeus
ENSLACG00000010869	CNOT1	80	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSLACG00000010869	CNOT1	96	97.917	ENSCPBG00000026222	CNOT1	99	97.917	Chrysemys_picta_bellii
ENSLACG00000010869	CNOT1	100	58.780	ENSCING00000009149	-	100	58.745	Ciona_intestinalis
ENSLACG00000010869	CNOT1	89	63.397	ENSCSAVG00000002414	-	98	65.054	Ciona_savignyi
ENSLACG00000010869	CNOT1	100	93.066	ENSCANG00000040534	CNOT1	100	93.066	Colobus_angolensis_palliatus
ENSLACG00000010869	CNOT1	100	94.949	ENSCGRG00001016365	Cnot1	100	94.949	Cricetulus_griseus_chok1gshd
ENSLACG00000010869	CNOT1	100	94.949	ENSCGRG00000001714	Cnot1	100	94.949	Cricetulus_griseus_crigri
ENSLACG00000010869	CNOT1	100	83.473	ENSCVAG00000018930	cnot1	100	83.640	Cyprinodon_variegatus
ENSLACG00000010869	CNOT1	100	90.654	ENSDARG00000004174	cnot1	100	90.863	Danio_rerio
ENSLACG00000010869	CNOT1	100	92.890	ENSDNOG00000013250	CNOT1	100	92.890	Dasypus_novemcinctus
ENSLACG00000010869	CNOT1	92	53.060	FBgn0085436	Not1	94	53.228	Drosophila_melanogaster
ENSLACG00000010869	CNOT1	85	96.687	ENSETEG00000012806	CNOT1	84	96.687	Echinops_telfairi
ENSLACG00000010869	CNOT1	82	76.637	ENSEBUG00000011534	cnot1	95	76.637	Eptatretus_burgeri
ENSLACG00000010869	CNOT1	97	98.056	ENSEASG00005005819	CNOT1	100	98.204	Equus_asinus_asinus
ENSLACG00000010869	CNOT1	97	99.018	ENSECAG00000009889	CNOT1	100	99.018	Equus_caballus
ENSLACG00000010869	CNOT1	90	94.122	ENSEEUG00000006015	CNOT1	90	94.122	Erinaceus_europaeus
ENSLACG00000010869	CNOT1	100	90.439	ENSELUG00000014085	cnot1	100	90.774	Esox_lucius
ENSLACG00000010869	CNOT1	100	94.796	ENSFCAG00000025155	CNOT1	100	94.796	Felis_catus
ENSLACG00000010869	CNOT1	100	94.907	ENSFALG00000007285	CNOT1	100	94.907	Ficedula_albicollis
ENSLACG00000010869	CNOT1	100	95.076	ENSFDAG00000013399	CNOT1	100	95.076	Fukomys_damarensis
ENSLACG00000010869	CNOT1	100	90.592	ENSFHEG00000020574	cnot1	100	90.634	Fundulus_heteroclitus
ENSLACG00000010869	CNOT1	91	90.051	ENSGMOG00000012864	cnot1	100	90.282	Gadus_morhua
ENSLACG00000010869	CNOT1	100	94.865	ENSGALG00000002301	CNOT1	100	94.865	Gallus_gallus
ENSLACG00000010869	CNOT1	100	89.379	ENSGAFG00000015005	cnot1	100	89.463	Gambusia_affinis
ENSLACG00000010869	CNOT1	91	90.333	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSLACG00000010869	CNOT1	100	94.615	ENSGAGG00000022646	CNOT1	100	95.971	Gopherus_agassizii
ENSLACG00000010869	CNOT1	100	95.118	ENSGGOG00000009547	CNOT1	100	95.118	Gorilla_gorilla
ENSLACG00000010869	CNOT1	99	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSLACG00000010869	CNOT1	100	94.992	ENSHGLG00000014322	CNOT1	100	94.992	Heterocephalus_glaber_female
ENSLACG00000010869	CNOT1	100	89.670	ENSHCOG00000006501	cnot1	100	89.921	Hippocampus_comes
ENSLACG00000010869	CNOT1	100	89.178	ENSIPUG00000011915	cnot1	100	90.915	Ictalurus_punctatus
ENSLACG00000010869	CNOT1	100	94.992	ENSSTOG00000005490	CNOT1	100	94.992	Ictidomys_tridecemlineatus
ENSLACG00000010869	CNOT1	100	94.360	ENSJJAG00000000633	Cnot1	100	94.360	Jaculus_jaculus
ENSLACG00000010869	CNOT1	100	90.377	ENSKMAG00000006149	cnot1	100	90.502	Kryptolebias_marmoratus
ENSLACG00000010869	CNOT1	95	96.607	ENSLBEG00000004740	cnot1	100	96.607	Labrus_bergylta
ENSLACG00000010869	CNOT1	100	93.498	ENSLOCG00000006324	cnot1	100	93.540	Lepisosteus_oculatus
ENSLACG00000010869	CNOT1	100	94.828	ENSLAFG00000000098	CNOT1	100	94.828	Loxodonta_africana
ENSLACG00000010869	CNOT1	100	94.781	ENSMFAG00000035888	CNOT1	100	94.781	Macaca_fascicularis
ENSLACG00000010869	CNOT1	100	94.992	ENSMMUG00000014625	CNOT1	100	94.992	Macaca_mulatta
ENSLACG00000010869	CNOT1	100	92.488	ENSMNEG00000031820	CNOT1	100	95.049	Macaca_nemestrina
ENSLACG00000010869	CNOT1	100	93.603	ENSMLEG00000040933	CNOT1	100	93.603	Mandrillus_leucophaeus
ENSLACG00000010869	CNOT1	100	89.295	ENSMAMG00000016524	cnot1	100	89.421	Mastacembelus_armatus
ENSLACG00000010869	CNOT1	99	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSLACG00000010869	CNOT1	100	94.655	ENSMGAG00000001908	CNOT1	100	94.655	Meleagris_gallopavo
ENSLACG00000010869	CNOT1	100	94.907	ENSMICG00000007071	CNOT1	100	95.076	Microcebus_murinus
ENSLACG00000010869	CNOT1	100	94.823	ENSMOCG00000017969	Cnot1	100	94.823	Microtus_ochrogaster
ENSLACG00000010869	CNOT1	99	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSLACG00000010869	CNOT1	100	95.078	ENSMODG00000014199	CNOT1	100	95.078	Monodelphis_domestica
ENSLACG00000010869	CNOT1	100	90.466	ENSMALG00000008645	cnot1	100	90.550	Monopterus_albus
ENSLACG00000010869	CNOT1	95	97.882	MGP_CAROLIEiJ_G0031430	Cnot1	92	97.882	Mus_caroli
ENSLACG00000010869	CNOT1	100	94.907	ENSMUSG00000036550	Cnot1	100	94.907	Mus_musculus
ENSLACG00000010869	CNOT1	100	94.949	MGP_PahariEiJ_G0023028	Cnot1	100	94.949	Mus_pahari
ENSLACG00000010869	CNOT1	100	94.907	MGP_SPRETEiJ_G0032549	Cnot1	100	94.907	Mus_spretus
ENSLACG00000010869	CNOT1	100	95.076	ENSMPUG00000004830	CNOT1	100	95.076	Mustela_putorius_furo
ENSLACG00000010869	CNOT1	100	94.739	ENSMLUG00000003728	CNOT1	100	94.739	Myotis_lucifugus
ENSLACG00000010869	CNOT1	100	94.992	ENSNGAG00000018628	Cnot1	100	94.992	Nannospalax_galili
ENSLACG00000010869	CNOT1	96	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSLACG00000010869	CNOT1	100	94.697	ENSNLEG00000003566	CNOT1	100	95.076	Nomascus_leucogenys
ENSLACG00000010869	CNOT1	86	92.841	ENSMEUG00000006145	CNOT1	88	92.841	Notamacropus_eugenii
ENSLACG00000010869	CNOT1	86	99.111	ENSOPRG00000005604	CNOT1	86	99.111	Ochotona_princeps
ENSLACG00000010869	CNOT1	100	95.118	ENSODEG00000016337	CNOT1	100	95.118	Octodon_degus
ENSLACG00000010869	CNOT1	100	90.871	ENSONIG00000007358	cnot1	100	90.955	Oreochromis_niloticus
ENSLACG00000010869	CNOT1	91	94.235	ENSOANG00000012109	CNOT1	100	95.016	Ornithorhynchus_anatinus
ENSLACG00000010869	CNOT1	100	95.034	ENSOCUG00000006911	CNOT1	100	95.034	Oryctolagus_cuniculus
ENSLACG00000010869	CNOT1	100	90.566	ENSORLG00000013734	cnot1	100	90.608	Oryzias_latipes
ENSLACG00000010869	CNOT1	100	88.828	ENSORLG00020017012	cnot1	100	88.870	Oryzias_latipes_hni
ENSLACG00000010869	CNOT1	100	88.744	ENSORLG00015007091	cnot1	100	88.744	Oryzias_latipes_hsok
ENSLACG00000010869	CNOT1	100	88.114	ENSOMEG00000015124	cnot1	100	88.875	Oryzias_melastigma
ENSLACG00000010869	CNOT1	100	95.076	ENSOGAG00000000543	CNOT1	100	95.076	Otolemur_garnettii
ENSLACG00000010869	CNOT1	100	95.160	ENSOARG00000001567	CNOT1	100	95.160	Ovis_aries
ENSLACG00000010869	CNOT1	100	95.076	ENSPPAG00000022013	CNOT1	100	95.076	Pan_paniscus
ENSLACG00000010869	CNOT1	100	95.076	ENSPPRG00000004867	CNOT1	100	95.076	Panthera_pardus
ENSLACG00000010869	CNOT1	100	95.076	ENSPTIG00000012589	CNOT1	100	95.076	Panthera_tigris_altaica
ENSLACG00000010869	CNOT1	100	94.796	ENSPTRG00000008183	CNOT1	100	94.796	Pan_troglodytes
ENSLACG00000010869	CNOT1	100	91.911	ENSPANG00000020901	CNOT1	100	91.911	Papio_anubis
ENSLACG00000010869	CNOT1	100	92.530	ENSPKIG00000023538	CNOT1	100	92.446	Paramormyrops_kingsleyae
ENSLACG00000010869	CNOT1	99	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSLACG00000010869	CNOT1	100	94.823	ENSPSIG00000005499	CNOT1	100	94.823	Pelodiscus_sinensis
ENSLACG00000010869	CNOT1	100	81.040	ENSPMAG00000009381	cnot1	100	81.000	Petromyzon_marinus
ENSLACG00000010869	CNOT1	97	97.917	ENSPCIG00000007343	CNOT1	100	98.004	Phascolarctos_cinereus
ENSLACG00000010869	CNOT1	99	89.894	ENSPFOG00000003497	cnot1	100	89.937	Poecilia_formosa
ENSLACG00000010869	CNOT1	95	96.208	ENSPLAG00000014018	cnot1	100	96.208	Poecilia_latipinna
ENSLACG00000010869	CNOT1	95	96.208	ENSPMEG00000005868	cnot1	100	96.208	Poecilia_mexicana
ENSLACG00000010869	CNOT1	95	96.208	ENSPREG00000018793	cnot1	100	96.208	Poecilia_reticulata
ENSLACG00000010869	CNOT1	100	95.118	ENSPPYG00000007410	CNOT1	100	95.118	Pongo_abelii
ENSLACG00000010869	CNOT1	90	91.908	ENSPCAG00000003241	CNOT1	90	91.908	Procavia_capensis
ENSLACG00000010869	CNOT1	100	94.587	ENSPCOG00000027139	CNOT1	100	94.755	Propithecus_coquereli
ENSLACG00000010869	CNOT1	100	92.298	ENSPVAG00000004243	CNOT1	100	92.508	Pteropus_vampyrus
ENSLACG00000010869	CNOT1	99	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSLACG00000010869	CNOT1	100	90.198	ENSPNAG00000000246	cnot1	100	90.618	Pygocentrus_nattereri
ENSLACG00000010869	CNOT1	100	94.907	ENSRNOG00000012271	Cnot1	100	94.907	Rattus_norvegicus
ENSLACG00000010869	CNOT1	100	92.824	ENSRBIG00000044598	CNOT1	100	92.824	Rhinopithecus_bieti
ENSLACG00000010869	CNOT1	100	95.034	ENSRROG00000000906	CNOT1	100	95.034	Rhinopithecus_roxellana
ENSLACG00000010869	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSLACG00000010869	CNOT1	100	90.666	ENSSBOG00000029155	CNOT1	100	90.666	Saimiri_boliviensis_boliviensis
ENSLACG00000010869	CNOT1	100	95.122	ENSSHAG00000012187	CNOT1	100	95.122	Sarcophilus_harrisii
ENSLACG00000010869	CNOT1	100	90.818	ENSSFOG00015017614	cnot1	100	90.818	Scleropages_formosus
ENSLACG00000010869	CNOT1	99	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSLACG00000010869	CNOT1	99	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSLACG00000010869	CNOT1	99	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSLACG00000010869	CNOT1	84	99.400	ENSSARG00000000762	CNOT1	88	99.400	Sorex_araneus
ENSLACG00000010869	CNOT1	100	90.138	ENSSPAG00000018802	cnot1	100	90.390	Stegastes_partitus
ENSLACG00000010869	CNOT1	97	98.056	ENSSSCG00000002799	CNOT1	100	98.204	Sus_scrofa
ENSLACG00000010869	CNOT1	100	94.914	ENSTGUG00000005919	CNOT1	100	94.914	Taeniopygia_guttata
ENSLACG00000010869	CNOT1	100	89.403	ENSTNIG00000018706	cnot1	100	89.445	Tetraodon_nigroviridis
ENSLACG00000010869	CNOT1	80	97.183	ENSTBEG00000000720	CNOT1	80	97.183	Tupaia_belangeri
ENSLACG00000010869	CNOT1	95	95.396	ENSTTRG00000008460	CNOT1	95	95.396	Tursiops_truncatus
ENSLACG00000010869	CNOT1	100	95.076	ENSUAMG00000009251	CNOT1	100	95.076	Ursus_americanus
ENSLACG00000010869	CNOT1	100	95.076	ENSUMAG00000021291	CNOT1	100	95.076	Ursus_maritimus
ENSLACG00000010869	CNOT1	97	94.469	ENSVPAG00000008846	CNOT1	97	94.469	Vicugna_pacos
ENSLACG00000010869	CNOT1	100	93.962	ENSVVUG00000024037	CNOT1	100	95.568	Vulpes_vulpes
ENSLACG00000010869	CNOT1	100	88.959	ENSXETG00000015900	cnot1	100	88.707	Xenopus_tropicalis
ENSLACG00000010869	CNOT1	100	89.463	ENSXCOG00000013552	cnot1	100	89.547	Xiphophorus_couchianus
ENSLACG00000010869	CNOT1	100	89.505	ENSXMAG00000006031	cnot1	100	89.589	Xiphophorus_maculatus